Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC245047.7-201ENST00000440265 293 ntBASIC0.93□□□□□ -2.26
C9orf40Q8IXQ3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.93□□□□□ -2.26
C9orf40Q8IXQ3 SNORD111.1-201ENST00000516421 86 ntBASIC0.93□□□□□ -2.26
C9orf40Q8IXQ3 Y_RNA.711-201ENST00000516993 102 ntBASIC0.93□□□□□ -2.26
C9orf40Q8IXQ3 AC136628.3-201ENST00000521868 290 ntBASIC0.93□□□□□ -2.26
C9orf40Q8IXQ3 JPX_2.1-201ENST00000614161 69 ntBASIC0.93□□□□□ -2.26
C9orf40Q8IXQ3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.93□□□□□ -2.26
C9orf40Q8IXQ3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
C9orf40Q8IXQ3 MIR96-201ENST00000362288 78 ntBASIC0.92□□□□□ -2.26
C9orf40Q8IXQ3 RNU4-90P-201ENST00000362773 141 ntBASIC0.92□□□□□ -2.26
C9orf40Q8IXQ3 RNU6-1048P-201ENST00000364054 107 ntBASIC0.92□□□□□ -2.26
C9orf40Q8IXQ3 Y_RNA.380-201ENST00000365663 111 ntBASIC0.92□□□□□ -2.26
C9orf40Q8IXQ3 AC117470.1-201ENST00000381974 330 ntBASIC0.92□□□□□ -2.26
C9orf40Q8IXQ3 RNU6-102P-201ENST00000384485 104 ntBASIC0.92□□□□□ -2.26
C9orf40Q8IXQ3 MIR136-201ENST00000385207 82 ntBASIC0.92□□□□□ -2.26
C9orf40Q8IXQ3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
C9orf40Q8IXQ3 RNU6-910P-201ENST00000390844 107 ntBASIC0.92□□□□□ -2.26
C9orf40Q8IXQ3 HMGN2P32-201ENST00000444648 269 ntBASIC0.92□□□□□ -2.26
C9orf40Q8IXQ3 RNU6-496P-201ENST00000516145 99 ntBASIC0.92□□□□□ -2.26
C9orf40Q8IXQ3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.92□□□□□ -2.26
C9orf40Q8IXQ3 MIR3171-201ENST00000584270 74 ntBASIC0.92□□□□□ -2.26
C9orf40Q8IXQ3 AC027335.2-201ENST00000624030 375 ntBASIC0.92□□□□□ -2.26
C9orf40Q8IXQ3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.92□□□□□ -2.26
C9orf40Q8IXQ3 RNU6-801P-201ENST00000364087 105 ntBASIC0.91□□□□□ -2.26
C9orf40Q8IXQ3 Y_RNA.418-201ENST00000384029 102 ntBASIC0.91□□□□□ -2.26
C9orf40Q8IXQ3 SNORA72.4-201ENST00000384174 132 ntBASIC0.91□□□□□ -2.26
C9orf40Q8IXQ3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
C9orf40Q8IXQ3 MIR1276-201ENST00000408707 83 ntBASIC0.91□□□□□ -2.26
C9orf40Q8IXQ3 RNU2-14P-201ENST00000411053 191 ntBASIC0.91□□□□□ -2.26
C9orf40Q8IXQ3 HSPE1P25-201ENST00000455484 251 ntBASIC0.91□□□□□ -2.26
C9orf40Q8IXQ3 RNU7-141P-201ENST00000459304 62 ntBASIC0.91□□□□□ -2.26
C9orf40Q8IXQ3 RNU6-191P-201ENST00000516295 94 ntBASIC0.91□□□□□ -2.26
C9orf40Q8IXQ3 SNORA40.15-201ENST00000516884 107 ntBASIC0.91□□□□□ -2.26
C9orf40Q8IXQ3 RNA5SP404-201ENST00000517118 132 ntBASIC0.91□□□□□ -2.26
C9orf40Q8IXQ3 AC090142.3-201ENST00000519012 385 ntBASIC0.91□□□□□ -2.26
C9orf40Q8IXQ3 AL096861.1-201ENST00000610899 123 ntBASIC0.91□□□□□ -2.26
C9orf40Q8IXQ3 MIR6767-201ENST00000637302 66 ntBASIC0.91□□□□□ -2.26
C9orf40Q8IXQ3 Y_RNA.105-201ENST00000363182 111 ntBASIC0.9□□□□□ -2.27
C9orf40Q8IXQ3 Y_RNA.158-201ENST00000363651 101 ntBASIC0.9□□□□□ -2.27
C9orf40Q8IXQ3 RNU6-1209P-201ENST00000363655 107 ntBASIC0.9□□□□□ -2.27
C9orf40Q8IXQ3 Y_RNA.216-201ENST00000364205 93 ntBASIC0.9□□□□□ -2.27
C9orf40Q8IXQ3 Y_RNA.796-201ENST00000364268 102 ntBASIC0.9□□□□□ -2.27
C9orf40Q8IXQ3 Y_RNA.799-201ENST00000364992 102 ntBASIC0.9□□□□□ -2.27
C9orf40Q8IXQ3 Y_RNA.455-201ENST00000384230 98 ntBASIC0.9□□□□□ -2.27
C9orf40Q8IXQ3 Y_RNA.569-201ENST00000384749 103 ntBASIC0.9□□□□□ -2.27
C9orf40Q8IXQ3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.9□□□□□ -2.27
C9orf40Q8IXQ3 SNORA36B-201ENST00000410438 131 ntBASIC0.9□□□□□ -2.27
C9orf40Q8IXQ3 RNU6-437P-201ENST00000459408 95 ntBASIC0.9□□□□□ -2.27
C9orf40Q8IXQ3 RPS23P4-201ENST00000487908 423 ntBASIC0.9□□□□□ -2.27
C9orf40Q8IXQ3 Y_RNA.676-201ENST00000516393 96 ntBASIC0.9□□□□□ -2.27
C9orf40Q8IXQ3 AC020661.2-201ENST00000560114 134 ntBASIC0.9□□□□□ -2.27
C9orf40Q8IXQ3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
C9orf40Q8IXQ3 AC007742.2-201ENST00000618226 398 ntBASIC0.9□□□□□ -2.27
C9orf40Q8IXQ3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
C9orf40Q8IXQ3 Y_RNA.136-201ENST00000363444 102 ntBASIC0.89□□□□□ -2.27
C9orf40Q8IXQ3 SNORD14E-201ENST00000364009 85 ntBASIC0.89□□□□□ -2.27
C9orf40Q8IXQ3 RNU6-969P-201ENST00000383900 105 ntBASIC0.89□□□□□ -2.27
C9orf40Q8IXQ3 Y_RNA.527-201ENST00000384573 102 ntBASIC0.89□□□□□ -2.27
C9orf40Q8IXQ3 MIR15B-201ENST00000385045 98 ntBASIC0.89□□□□□ -2.27
C9orf40Q8IXQ3 Y_RNA.581-201ENST00000391017 97 ntBASIC0.89□□□□□ -2.27
C9orf40Q8IXQ3 SNORA26.5-201ENST00000391215 123 ntBASIC0.89□□□□□ -2.27
C9orf40Q8IXQ3 RNU6-121P-201ENST00000410525 99 ntBASIC0.89□□□□□ -2.27
C9orf40Q8IXQ3 SNORD116-28-201ENST00000516123 91 ntBASIC0.89□□□□□ -2.27
C9orf40Q8IXQ3 RNU6-764P-201ENST00000516396 105 ntBASIC0.89□□□□□ -2.27
C9orf40Q8IXQ3 AC131281.1-201ENST00000522984 164 ntBASIC0.89□□□□□ -2.27
C9orf40Q8IXQ3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.89□□□□□ -2.27
C9orf40Q8IXQ3 MIR2681-201ENST00000581814 105 ntBASIC0.89□□□□□ -2.27
C9orf40Q8IXQ3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.89□□□□□ -2.27
C9orf40Q8IXQ3 AC134026.1-201ENST00000623249 2239 ntBASIC0.88□□□□□ -2.27
C9orf40Q8IXQ3 RNU6-290P-201ENST00000365212 101 ntBASIC0.88□□□□□ -2.27
C9orf40Q8IXQ3 Y_RNA.363-201ENST00000365529 113 ntBASIC0.88□□□□□ -2.27
C9orf40Q8IXQ3 MTCO2P33-201ENST00000402100 465 ntBASIC0.88□□□□□ -2.27
C9orf40Q8IXQ3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.88□□□□□ -2.27
C9orf40Q8IXQ3 ELOCP20-201ENST00000422460 345 ntBASIC0.88□□□□□ -2.27
C9orf40Q8IXQ3 MTCO1P5-201ENST00000433573 344 ntBASIC0.88□□□□□ -2.27
C9orf40Q8IXQ3 MRPS35P2-201ENST00000508242 191 ntBASIC0.88□□□□□ -2.27
C9orf40Q8IXQ3 SNORD79.1-201ENST00000516069 84 ntBASIC0.88□□□□□ -2.27
C9orf40Q8IXQ3 RNY3P15-201ENST00000516297 97 ntBASIC0.88□□□□□ -2.27
C9orf40Q8IXQ3 SNORA18.7-201ENST00000516910 131 ntBASIC0.88□□□□□ -2.27
C9orf40Q8IXQ3 SNORA74.3-201ENST00000517108 154 ntBASIC0.88□□□□□ -2.27
C9orf40Q8IXQ3 AC113195.1-201ENST00000579952 141 ntBASIC0.88□□□□□ -2.27
C9orf40Q8IXQ3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.88□□□□□ -2.27
C9orf40Q8IXQ3 MIR3192-201ENST00000584920 77 ntBASIC0.88□□□□□ -2.27
C9orf40Q8IXQ3 AC087685.1-201ENST00000587507 141 ntBASIC0.88□□□□□ -2.27
C9orf40Q8IXQ3 AC005357.1-201ENST00000588399 301 ntBASIC0.88□□□□□ -2.27
C9orf40Q8IXQ3 AL355297.3-201ENST00000604082 446 ntBASIC0.88□□□□□ -2.27
C9orf40Q8IXQ3 RNU6-674P-201ENST00000363831 107 ntBASIC0.87□□□□□ -2.27
C9orf40Q8IXQ3 RNU1-124P-201ENST00000363861 145 ntBASIC0.87□□□□□ -2.27
C9orf40Q8IXQ3 RNU6-770P-201ENST00000363929 105 ntBASIC0.87□□□□□ -2.27
C9orf40Q8IXQ3 Y_RNA.210-201ENST00000364161 110 ntBASIC0.87□□□□□ -2.27
C9orf40Q8IXQ3 Y_RNA.214-201ENST00000364201 112 ntBASIC0.87□□□□□ -2.27
C9orf40Q8IXQ3 RNU1-93P-201ENST00000364704 169 ntBASIC0.87□□□□□ -2.27
C9orf40Q8IXQ3 MIR520C-201ENST00000385005 87 ntBASIC0.87□□□□□ -2.27
C9orf40Q8IXQ3 MIR802-201ENST00000390235 94 ntBASIC0.87□□□□□ -2.27
C9orf40Q8IXQ3 MIR1278-201ENST00000408753 81 ntBASIC0.87□□□□□ -2.27
C9orf40Q8IXQ3 AC245047.8-201ENST00000456455 284 ntBASIC0.87□□□□□ -2.27
C9orf40Q8IXQ3 NDUFA4P2-201ENST00000489989 244 ntBASIC0.87□□□□□ -2.27
C9orf40Q8IXQ3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.87□□□□□ -2.27
C9orf40Q8IXQ3 Y_RNA.701-201ENST00000516812 110 ntBASIC0.87□□□□□ -2.27
C9orf40Q8IXQ3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 256 ms