Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 RBM11P1-201ENST00000604951 799 ntBASIC0.53□□□□□ -2.32
CDKL3Q8IVW4 AC025253.1-201ENST00000613623 543 ntBASIC0.53□□□□□ -2.32
CDKL3Q8IVW4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
CDKL3Q8IVW4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CDKL3Q8IVW4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.52□□□□□ -2.33
CDKL3Q8IVW4 RNU6-654P-201ENST00000364373 107 ntBASIC0.52□□□□□ -2.33
CDKL3Q8IVW4 Y_RNA.341-201ENST00000365341 102 ntBASIC0.52□□□□□ -2.33
CDKL3Q8IVW4 Y_RNA.570-201ENST00000384750 101 ntBASIC0.52□□□□□ -2.33
CDKL3Q8IVW4 SNORD89-201ENST00000390981 114 ntBASIC0.52□□□□□ -2.33
CDKL3Q8IVW4 SNORD28B-201ENST00000390993 75 ntBASIC0.52□□□□□ -2.33
CDKL3Q8IVW4 AC098614.3-201ENST00000438957 440 ntBASIC0.52□□□□□ -2.33
CDKL3Q8IVW4 AC005042.3-201ENST00000453230 174 ntBASIC0.52□□□□□ -2.33
CDKL3Q8IVW4 RNU4-54P-201ENST00000516428 129 ntBASIC0.52□□□□□ -2.33
CDKL3Q8IVW4 VN1R91P-201ENST00000594377 169 ntBASIC0.52□□□□□ -2.33
CDKL3Q8IVW4 AC007742.2-201ENST00000618226 398 ntBASIC0.52□□□□□ -2.33
CDKL3Q8IVW4 SNORD18A-201ENST00000363753 72 ntBASIC0.51□□□□□ -2.33
CDKL3Q8IVW4 SNORD14E-201ENST00000364009 85 ntBASIC0.51□□□□□ -2.33
CDKL3Q8IVW4 Y_RNA.310-201ENST00000365063 113 ntBASIC0.51□□□□□ -2.33
CDKL3Q8IVW4 Y_RNA.368-201ENST00000365547 113 ntBASIC0.51□□□□□ -2.33
CDKL3Q8IVW4 Y_RNA.387-201ENST00000383918 102 ntBASIC0.51□□□□□ -2.33
CDKL3Q8IVW4 RNU6-1323P-201ENST00000384025 107 ntBASIC0.51□□□□□ -2.33
CDKL3Q8IVW4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.51□□□□□ -2.33
CDKL3Q8IVW4 AL392103.1-201ENST00000447000 198 ntBASIC0.51□□□□□ -2.33
CDKL3Q8IVW4 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
CDKL3Q8IVW4 SNORA20.3-201ENST00000516880 132 ntBASIC0.51□□□□□ -2.33
CDKL3Q8IVW4 RNU7-116P-201ENST00000516940 62 ntBASIC0.51□□□□□ -2.33
CDKL3Q8IVW4 AC036111.3-201ENST00000526389 112 ntBASIC0.51□□□□□ -2.33
CDKL3Q8IVW4 MIR4711-201ENST00000578274 70 ntBASIC0.51□□□□□ -2.33
CDKL3Q8IVW4 POLR3GP1-201ENST00000594073 261 ntBASIC0.51□□□□□ -2.33
CDKL3Q8IVW4 RNU6-94P-201ENST00000607728 107 ntBASIC0.51□□□□□ -2.33
CDKL3Q8IVW4 AL355073.2-201ENST00000612106 557 ntBASIC0.51□□□□□ -2.33
CDKL3Q8IVW4 AC134026.1-201ENST00000623249 2239 ntBASIC0.5□□□□□ -2.33
CDKL3Q8IVW4 Y_RNA.148-201ENST00000363557 117 ntBASIC0.5□□□□□ -2.33
CDKL3Q8IVW4 RNA5SP325-201ENST00000363756 130 ntBASIC0.5□□□□□ -2.33
CDKL3Q8IVW4 RNU6-1040P-201ENST00000383974 107 ntBASIC0.5□□□□□ -2.33
CDKL3Q8IVW4 Y_RNA.505-201ENST00000384489 102 ntBASIC0.5□□□□□ -2.33
CDKL3Q8IVW4 SNORD116-29-201ENST00000384516 83 ntBASIC0.5□□□□□ -2.33
CDKL3Q8IVW4 RNY4P36-201ENST00000391116 96 ntBASIC0.5□□□□□ -2.33
CDKL3Q8IVW4 AL590004.1-201ENST00000405321 300 ntBASIC0.5□□□□□ -2.33
CDKL3Q8IVW4 RNA5SP193-201ENST00000410353 107 ntBASIC0.5□□□□□ -2.33
CDKL3Q8IVW4 AC138393.2-201ENST00000414742 246 ntBASIC0.5□□□□□ -2.33
CDKL3Q8IVW4 AC092628.1-201ENST00000436250 252 ntBASIC0.5□□□□□ -2.33
CDKL3Q8IVW4 U7.7-201ENST00000459276 60 ntBASIC0.5□□□□□ -2.33
CDKL3Q8IVW4 AC098869.1-201ENST00000481627 292 ntBASIC0.5□□□□□ -2.33
CDKL3Q8IVW4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.5□□□□□ -2.33
CDKL3Q8IVW4 AC113410.1-201ENST00000505029 247 ntBASIC0.5□□□□□ -2.33
CDKL3Q8IVW4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.5□□□□□ -2.33
CDKL3Q8IVW4 MIR4423-201ENST00000580922 80 ntBASIC0.5□□□□□ -2.33
CDKL3Q8IVW4 DEFB117-201ENST00000602356 141 ntBASIC0.5□□□□□ -2.33
CDKL3Q8IVW4 7SK.10-201ENST00000621414 298 ntBASIC0.5□□□□□ -2.33
CDKL3Q8IVW4 AC008133.2-201ENST00000624540 351 ntBASIC0.5□□□□□ -2.33
CDKL3Q8IVW4 RNU6-369P-201ENST00000362515 102 ntBASIC0.49□□□□□ -2.33
CDKL3Q8IVW4 Y_RNA.142-201ENST00000363491 102 ntBASIC0.49□□□□□ -2.33
CDKL3Q8IVW4 SNORD114-23-201ENST00000363536 72 ntBASIC0.49□□□□□ -2.33
CDKL3Q8IVW4 RNA5SP499-201ENST00000363982 119 ntBASIC0.49□□□□□ -2.33
CDKL3Q8IVW4 Y_RNA.203-201ENST00000364106 102 ntBASIC0.49□□□□□ -2.33
CDKL3Q8IVW4 Y_RNA.331-201ENST00000365267 102 ntBASIC0.49□□□□□ -2.33
CDKL3Q8IVW4 RNY1P8-201ENST00000383970 114 ntBASIC0.49□□□□□ -2.33
CDKL3Q8IVW4 Y_RNA.428-201ENST00000384078 102 ntBASIC0.49□□□□□ -2.33
CDKL3Q8IVW4 Y_RNA.456-201ENST00000384232 111 ntBASIC0.49□□□□□ -2.33
CDKL3Q8IVW4 SNORD99-201ENST00000408612 74 ntBASIC0.49□□□□□ -2.33
CDKL3Q8IVW4 RNA5SP95-201ENST00000410319 137 ntBASIC0.49□□□□□ -2.33
CDKL3Q8IVW4 AC010655.3-201ENST00000478818 450 ntBASIC0.49□□□□□ -2.33
CDKL3Q8IVW4 AC091951.2-201ENST00000500762 203 ntBASIC0.49□□□□□ -2.33
CDKL3Q8IVW4 RNU6-277P-201ENST00000516272 106 ntBASIC0.49□□□□□ -2.33
CDKL3Q8IVW4 RNU11-2P-201ENST00000516898 142 ntBASIC0.49□□□□□ -2.33
CDKL3Q8IVW4 Y_RNA.718-201ENST00000517110 102 ntBASIC0.49□□□□□ -2.33
CDKL3Q8IVW4 SNORD116.3-201ENST00000517176 78 ntBASIC0.49□□□□□ -2.33
CDKL3Q8IVW4 AC024405.2-202ENST00000532731 184 ntBASIC0.49□□□□□ -2.33
CDKL3Q8IVW4 AC093027.1-201ENST00000546698 429 ntBASIC0.49□□□□□ -2.33
CDKL3Q8IVW4 AC025627.3-201ENST00000582078 182 ntBASIC0.49□□□□□ -2.33
CDKL3Q8IVW4 MIR548AR-201ENST00000582191 57 ntBASIC0.49□□□□□ -2.33
CDKL3Q8IVW4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.49□□□□□ -2.33
CDKL3Q8IVW4 MIR4251-201ENST00000635819 61 ntBASIC0.49□□□□□ -2.33
CDKL3Q8IVW4 MIR4272-201ENST00000635924 64 ntBASIC0.49□□□□□ -2.33
CDKL3Q8IVW4 AL589743.1-201ENST00000551932 2712 ntBASIC0.48□□□□□ -2.33
CDKL3Q8IVW4 SNORD81.1-201ENST00000363064 77 ntBASIC0.48□□□□□ -2.33
CDKL3Q8IVW4 Y_RNA.384-201ENST00000383909 102 ntBASIC0.48□□□□□ -2.33
CDKL3Q8IVW4 Y_RNA.463-201ENST00000384271 102 ntBASIC0.48□□□□□ -2.33
CDKL3Q8IVW4 SNORD38C-201ENST00000384381 69 ntBASIC0.48□□□□□ -2.33
CDKL3Q8IVW4 MIR193B-201ENST00000384907 83 ntBASIC0.48□□□□□ -2.33
CDKL3Q8IVW4 RNU6-994P-201ENST00000410507 111 ntBASIC0.48□□□□□ -2.33
CDKL3Q8IVW4 SNRPGP14-201ENST00000435400 219 ntBASIC0.48□□□□□ -2.33
CDKL3Q8IVW4 AC067940.1-201ENST00000458411 300 ntBASIC0.48□□□□□ -2.33
CDKL3Q8IVW4 RPL23AP54-201ENST00000495129 419 ntBASIC0.48□□□□□ -2.33
CDKL3Q8IVW4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.48□□□□□ -2.33
CDKL3Q8IVW4 RNU6-1110P-201ENST00000516462 101 ntBASIC0.48□□□□□ -2.33
CDKL3Q8IVW4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.48□□□□□ -2.33
CDKL3Q8IVW4 AP003357.1-201ENST00000604497 148 ntBASIC0.48□□□□□ -2.33
CDKL3Q8IVW4 JPX_2.1-201ENST00000614161 69 ntBASIC0.48□□□□□ -2.33
CDKL3Q8IVW4 AC010205.1-201ENST00000616668 449 ntBASIC0.48□□□□□ -2.33
CDKL3Q8IVW4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.48□□□□□ -2.33
CDKL3Q8IVW4 MIR6516-201ENST00000630554 81 ntBASIC0.48□□□□□ -2.33
CDKL3Q8IVW4 AC099654.14-201ENST00000638599 341 ntBASIC0.48□□□□□ -2.33
CDKL3Q8IVW4 U8.7-201ENST00000364940 136 ntBASIC0.47□□□□□ -2.33
CDKL3Q8IVW4 MIR802-201ENST00000390235 94 ntBASIC0.47□□□□□ -2.33
CDKL3Q8IVW4 SNORD111-201ENST00000408139 94 ntBASIC0.47□□□□□ -2.33
CDKL3Q8IVW4 AF228730.4-201ENST00000421457 183 ntBASIC0.47□□□□□ -2.33
CDKL3Q8IVW4 AC024067.1-201ENST00000426199 223 ntBASIC0.47□□□□□ -2.33
CDKL3Q8IVW4 RNU6-496P-201ENST00000516145 99 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms