Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 MIR7974-201ENST00000615835 79 ntBASIC1.25□□□□□ -2.21
NUP54Q7Z3B4 AC007742.2-201ENST00000618226 398 ntBASIC1.25□□□□□ -2.21
NUP54Q7Z3B4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
NUP54Q7Z3B4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
NUP54Q7Z3B4 SNORA7.1-201ENST00000363750 139 ntBASIC1.24□□□□□ -2.21
NUP54Q7Z3B4 RNU6-899P-201ENST00000363947 107 ntBASIC1.24□□□□□ -2.21
NUP54Q7Z3B4 RNU6-514P-201ENST00000384208 107 ntBASIC1.24□□□□□ -2.21
NUP54Q7Z3B4 MIR526A1-201ENST00000384897 85 ntBASIC1.24□□□□□ -2.21
NUP54Q7Z3B4 AC113618.1-201ENST00000416747 285 ntBASIC1.24□□□□□ -2.21
NUP54Q7Z3B4 SNORD45.4-201ENST00000516629 73 ntBASIC1.24□□□□□ -2.21
NUP54Q7Z3B4 AC087685.1-201ENST00000587507 141 ntBASIC1.24□□□□□ -2.21
NUP54Q7Z3B4 AL357312.1-201ENST00000603879 298 ntBASIC1.24□□□□□ -2.21
NUP54Q7Z3B4 Y_RNA.812-201ENST00000610788 101 ntBASIC1.24□□□□□ -2.21
NUP54Q7Z3B4 Y_RNA.784-201ENST00000613803 101 ntBASIC1.24□□□□□ -2.21
NUP54Q7Z3B4 Y_RNA.787-201ENST00000616522 101 ntBASIC1.24□□□□□ -2.21
NUP54Q7Z3B4 Y_RNA.780-201ENST00000617336 101 ntBASIC1.24□□□□□ -2.21
NUP54Q7Z3B4 Y_RNA.801-201ENST00000619005 101 ntBASIC1.24□□□□□ -2.21
NUP54Q7Z3B4 AC022140.2-201ENST00000623500 188 ntBASIC1.24□□□□□ -2.21
NUP54Q7Z3B4 Y_RNA.84-201ENST00000363011 104 ntBASIC1.23□□□□□ -2.21
NUP54Q7Z3B4 SNORD50B-201ENST00000364995 70 ntBASIC1.23□□□□□ -2.21
NUP54Q7Z3B4 RNU6-1160P-201ENST00000384546 104 ntBASIC1.23□□□□□ -2.21
NUP54Q7Z3B4 RNU6-1011P-201ENST00000384668 107 ntBASIC1.23□□□□□ -2.21
NUP54Q7Z3B4 RNU6-763P-201ENST00000390865 106 ntBASIC1.23□□□□□ -2.21
NUP54Q7Z3B4 RNU6-1109P-201ENST00000391187 107 ntBASIC1.23□□□□□ -2.21
NUP54Q7Z3B4 DYNLT3P2-201ENST00000442517 295 ntBASIC1.23□□□□□ -2.21
NUP54Q7Z3B4 RNA5SP61-201ENST00000516453 100 ntBASIC1.23□□□□□ -2.21
NUP54Q7Z3B4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.23□□□□□ -2.21
NUP54Q7Z3B4 AC005357.1-201ENST00000588399 301 ntBASIC1.23□□□□□ -2.21
NUP54Q7Z3B4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.23□□□□□ -2.21
NUP54Q7Z3B4 RNU6-1209P-201ENST00000363655 107 ntBASIC1.22□□□□□ -2.21
NUP54Q7Z3B4 RNU6-694P-201ENST00000364071 147 ntBASIC1.22□□□□□ -2.21
NUP54Q7Z3B4 Y_RNA.796-201ENST00000364268 102 ntBASIC1.22□□□□□ -2.21
NUP54Q7Z3B4 Y_RNA.799-201ENST00000364992 102 ntBASIC1.22□□□□□ -2.21
NUP54Q7Z3B4 Y_RNA.336-201ENST00000365307 109 ntBASIC1.22□□□□□ -2.21
NUP54Q7Z3B4 RNU6-144P-201ENST00000383951 107 ntBASIC1.22□□□□□ -2.21
NUP54Q7Z3B4 SNORA25-201ENST00000384384 134 ntBASIC1.22□□□□□ -2.21
NUP54Q7Z3B4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.22□□□□□ -2.21
NUP54Q7Z3B4 MTCO2P33-201ENST00000402100 465 ntBASIC1.22□□□□□ -2.21
NUP54Q7Z3B4 MIR1298-201ENST00000408783 112 ntBASIC1.22□□□□□ -2.21
NUP54Q7Z3B4 RNU1-123P-201ENST00000458950 160 ntBASIC1.22□□□□□ -2.21
NUP54Q7Z3B4 AC091959.1-201ENST00000495857 238 ntBASIC1.22□□□□□ -2.21
NUP54Q7Z3B4 Y_RNA.720-201ENST00000517166 92 ntBASIC1.22□□□□□ -2.21
NUP54Q7Z3B4 FAM106DP-201ENST00000586416 501 ntBASIC1.22□□□□□ -2.21
NUP54Q7Z3B4 RNU6-1272P-201ENST00000362776 107 ntBASIC1.21□□□□□ -2.22
NUP54Q7Z3B4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
NUP54Q7Z3B4 AL603825.1-201ENST00000438481 80 ntBASIC1.21□□□□□ -2.22
NUP54Q7Z3B4 Y_RNA.637-201ENST00000459424 114 ntBASIC1.21□□□□□ -2.22
NUP54Q7Z3B4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.21□□□□□ -2.22
NUP54Q7Z3B4 SNORA27.4-201ENST00000516650 95 ntBASIC1.21□□□□□ -2.22
NUP54Q7Z3B4 BX284668.6-201ENST00000606899 438 ntBASIC1.21□□□□□ -2.22
NUP54Q7Z3B4 AC013791.1-201ENST00000616619 62 ntBASIC1.21□□□□□ -2.22
NUP54Q7Z3B4 AC134026.1-201ENST00000623249 2239 ntBASIC1.21□□□□□ -2.22
NUP54Q7Z3B4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
NUP54Q7Z3B4 Y_RNA.16-201ENST00000362421 102 ntBASIC1.2□□□□□ -2.22
NUP54Q7Z3B4 RNU6-713P-201ENST00000384761 107 ntBASIC1.2□□□□□ -2.22
NUP54Q7Z3B4 RNU6-1203P-201ENST00000410703 110 ntBASIC1.2□□□□□ -2.22
NUP54Q7Z3B4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.2□□□□□ -2.22
NUP54Q7Z3B4 AC015922.2-201ENST00000435593 184 ntBASIC1.2□□□□□ -2.22
NUP54Q7Z3B4 AL133373.1-201ENST00000497098 94 ntBASIC1.2□□□□□ -2.22
NUP54Q7Z3B4 SERF1AP1-201ENST00000514575 187 ntBASIC1.2□□□□□ -2.22
NUP54Q7Z3B4 RNU6-1338P-201ENST00000516328 91 ntBASIC1.2□□□□□ -2.22
NUP54Q7Z3B4 RNU6-1007P-201ENST00000516586 107 ntBASIC1.2□□□□□ -2.22
NUP54Q7Z3B4 RNA5SP404-201ENST00000517118 132 ntBASIC1.2□□□□□ -2.22
NUP54Q7Z3B4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.2□□□□□ -2.22
NUP54Q7Z3B4 snoU13.31-201ENST00000607291 104 ntBASIC1.2□□□□□ -2.22
NUP54Q7Z3B4 AC012676.2-201ENST00000619258 186 ntBASIC1.2□□□□□ -2.22
NUP54Q7Z3B4 AL353770.2-201ENST00000620024 78 ntBASIC1.2□□□□□ -2.22
NUP54Q7Z3B4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
NUP54Q7Z3B4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
NUP54Q7Z3B4 UBE2WP1-201ENST00000362030 340 ntBASIC1.19□□□□□ -2.22
NUP54Q7Z3B4 RNU6-1205P-201ENST00000363625 106 ntBASIC1.19□□□□□ -2.22
NUP54Q7Z3B4 RNU1-124P-201ENST00000363861 145 ntBASIC1.19□□□□□ -2.22
NUP54Q7Z3B4 SNORD14E-201ENST00000364009 85 ntBASIC1.19□□□□□ -2.22
NUP54Q7Z3B4 Y_RNA.217-201ENST00000364214 105 ntBASIC1.19□□□□□ -2.22
NUP54Q7Z3B4 MIR606-201ENST00000384851 96 ntBASIC1.19□□□□□ -2.22
NUP54Q7Z3B4 MIR222-201ENST00000384992 110 ntBASIC1.19□□□□□ -2.22
NUP54Q7Z3B4 MIR15B-201ENST00000385045 98 ntBASIC1.19□□□□□ -2.22
NUP54Q7Z3B4 MIR136-201ENST00000385207 82 ntBASIC1.19□□□□□ -2.22
NUP54Q7Z3B4 RPL39P39-201ENST00000455840 151 ntBASIC1.19□□□□□ -2.22
NUP54Q7Z3B4 MTND5P22-201ENST00000458380 195 ntBASIC1.19□□□□□ -2.22
NUP54Q7Z3B4 Y_RNA.641-201ENST00000459414 105 ntBASIC1.19□□□□□ -2.22
NUP54Q7Z3B4 NDUFA4P2-201ENST00000489989 244 ntBASIC1.19□□□□□ -2.22
NUP54Q7Z3B4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.19□□□□□ -2.22
NUP54Q7Z3B4 SNORA31.4-201ENST00000516049 129 ntBASIC1.19□□□□□ -2.22
NUP54Q7Z3B4 SNORD116-28-201ENST00000516123 91 ntBASIC1.19□□□□□ -2.22
NUP54Q7Z3B4 AC090142.3-201ENST00000519012 385 ntBASIC1.19□□□□□ -2.22
NUP54Q7Z3B4 RPL23AP91-201ENST00000569211 455 ntBASIC1.19□□□□□ -2.22
NUP54Q7Z3B4 MIR3660-201ENST00000584845 100 ntBASIC1.19□□□□□ -2.22
NUP54Q7Z3B4 AL022345.2-201ENST00000606307 135 ntBASIC1.19□□□□□ -2.22
NUP54Q7Z3B4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.19□□□□□ -2.22
NUP54Q7Z3B4 AC027335.2-201ENST00000624030 375 ntBASIC1.19□□□□□ -2.22
NUP54Q7Z3B4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
NUP54Q7Z3B4 Y_RNA.145-201ENST00000363527 102 ntBASIC1.18□□□□□ -2.22
NUP54Q7Z3B4 Y_RNA.242-201ENST00000364473 110 ntBASIC1.18□□□□□ -2.22
NUP54Q7Z3B4 SNORA63C-201ENST00000364578 129 ntBASIC1.18□□□□□ -2.22
NUP54Q7Z3B4 SNORA40.6-201ENST00000391153 128 ntBASIC1.18□□□□□ -2.22
NUP54Q7Z3B4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.18□□□□□ -2.22
NUP54Q7Z3B4 RNU6-1054P-201ENST00000411293 104 ntBASIC1.18□□□□□ -2.22
NUP54Q7Z3B4 SNORD11-201ENST00000459124 84 ntBASIC1.18□□□□□ -2.22
NUP54Q7Z3B4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms