Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.16□□□□□ -2.22
KRT39Q6A163 AL442644.1-201ENST00000454390 3105 ntBASIC1.15□□□□□ -2.23
KRT39Q6A163 Y_RNA.164-201ENST00000363709 102 ntBASIC1.15□□□□□ -2.23
KRT39Q6A163 snoU2-30.1-201ENST00000365012 70 ntBASIC1.15□□□□□ -2.23
KRT39Q6A163 RNU6-53P-201ENST00000365367 106 ntBASIC1.15□□□□□ -2.23
KRT39Q6A163 SNORA26.5-201ENST00000391215 123 ntBASIC1.15□□□□□ -2.23
KRT39Q6A163 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.15□□□□□ -2.23
KRT39Q6A163 RNU6-101P-201ENST00000410323 104 ntBASIC1.15□□□□□ -2.23
KRT39Q6A163 Y_RNA.602-201ENST00000410535 92 ntBASIC1.15□□□□□ -2.23
KRT39Q6A163 RPL39P39-201ENST00000455840 151 ntBASIC1.15□□□□□ -2.23
KRT39Q6A163 LINC01399-202ENST00000458450 244 ntBASIC1.15□□□□□ -2.23
KRT39Q6A163 RNU7-141P-201ENST00000459304 62 ntBASIC1.15□□□□□ -2.23
KRT39Q6A163 RPL23AP54-201ENST00000495129 419 ntBASIC1.15□□□□□ -2.23
KRT39Q6A163 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.15□□□□□ -2.23
KRT39Q6A163 SCARNA15.1-201ENST00000516384 125 ntBASIC1.15□□□□□ -2.23
KRT39Q6A163 SNORA70.22-201ENST00000517160 124 ntBASIC1.15□□□□□ -2.23
KRT39Q6A163 RNU6-988P-201ENST00000519081 107 ntBASIC1.15□□□□□ -2.23
KRT39Q6A163 AC136628.3-201ENST00000521868 290 ntBASIC1.15□□□□□ -2.23
KRT39Q6A163 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.15□□□□□ -2.23
KRT39Q6A163 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.14□□□□□ -2.23
KRT39Q6A163 RNU6-1084P-201ENST00000362498 107 ntBASIC1.14□□□□□ -2.23
KRT39Q6A163 Y_RNA.136-201ENST00000363444 102 ntBASIC1.14□□□□□ -2.23
KRT39Q6A163 Y_RNA.796-201ENST00000364268 102 ntBASIC1.14□□□□□ -2.23
KRT39Q6A163 Y_RNA.799-201ENST00000364992 102 ntBASIC1.14□□□□□ -2.23
KRT39Q6A163 Y_RNA.389-201ENST00000383924 113 ntBASIC1.14□□□□□ -2.23
KRT39Q6A163 AC087343.1-201ENST00000477341 475 ntBASIC1.14□□□□□ -2.23
KRT39Q6A163 RPS23P4-201ENST00000487908 423 ntBASIC1.14□□□□□ -2.23
KRT39Q6A163 NDUFA4P2-201ENST00000489989 244 ntBASIC1.14□□□□□ -2.23
KRT39Q6A163 RNU6-191P-201ENST00000516295 94 ntBASIC1.14□□□□□ -2.23
KRT39Q6A163 RNU6-1137P-201ENST00000517073 99 ntBASIC1.14□□□□□ -2.23
KRT39Q6A163 Y_RNA.721-201ENST00000517207 102 ntBASIC1.14□□□□□ -2.23
KRT39Q6A163 AC005357.1-201ENST00000588399 301 ntBASIC1.14□□□□□ -2.23
KRT39Q6A163 SNORD114-21-201ENST00000606412 72 ntBASIC1.14□□□□□ -2.23
KRT39Q6A163 RNU1-124P-201ENST00000363861 145 ntBASIC1.13□□□□□ -2.23
KRT39Q6A163 RNU6-392P-201ENST00000364926 101 ntBASIC1.13□□□□□ -2.23
KRT39Q6A163 SNORA33.2-201ENST00000365413 134 ntBASIC1.13□□□□□ -2.23
KRT39Q6A163 MIR222-201ENST00000384992 110 ntBASIC1.13□□□□□ -2.23
KRT39Q6A163 Y_RNA.581-201ENST00000391017 97 ntBASIC1.13□□□□□ -2.23
KRT39Q6A163 HMGN2P32-201ENST00000444648 269 ntBASIC1.13□□□□□ -2.23
KRT39Q6A163 RPS26P48-201ENST00000491713 339 ntBASIC1.13□□□□□ -2.23
KRT39Q6A163 SNORD79.1-201ENST00000516069 84 ntBASIC1.13□□□□□ -2.23
KRT39Q6A163 RNU7-40P-201ENST00000516397 64 ntBASIC1.13□□□□□ -2.23
KRT39Q6A163 SNORA74.3-201ENST00000517108 154 ntBASIC1.13□□□□□ -2.23
KRT39Q6A163 Y_RNA.812-201ENST00000610788 101 ntBASIC1.13□□□□□ -2.23
KRT39Q6A163 AL391903.3-201ENST00000612158 163 ntBASIC1.13□□□□□ -2.23
KRT39Q6A163 Y_RNA.784-201ENST00000613803 101 ntBASIC1.13□□□□□ -2.23
KRT39Q6A163 Y_RNA.787-201ENST00000616522 101 ntBASIC1.13□□□□□ -2.23
KRT39Q6A163 Y_RNA.780-201ENST00000617336 101 ntBASIC1.13□□□□□ -2.23
KRT39Q6A163 Y_RNA.801-201ENST00000619005 101 ntBASIC1.13□□□□□ -2.23
KRT39Q6A163 SNORA63-201ENST00000363450 132 ntBASIC1.12□□□□□ -2.23
KRT39Q6A163 RNU6-1209P-201ENST00000363655 107 ntBASIC1.12□□□□□ -2.23
KRT39Q6A163 SNORA63C-201ENST00000364578 129 ntBASIC1.12□□□□□ -2.23
KRT39Q6A163 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
KRT39Q6A163 AC113618.1-201ENST00000416747 285 ntBASIC1.12□□□□□ -2.23
KRT39Q6A163 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.12□□□□□ -2.23
KRT39Q6A163 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.12□□□□□ -2.23
KRT39Q6A163 MIR4680-201ENST00000580906 66 ntBASIC1.12□□□□□ -2.23
KRT39Q6A163 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
KRT39Q6A163 AC091895.1-201ENST00000624494 256 ntBASIC1.12□□□□□ -2.23
KRT39Q6A163 AC134026.1-201ENST00000623249 2239 ntBASIC1.11□□□□□ -2.23
KRT39Q6A163 RNU4-90P-201ENST00000362773 141 ntBASIC1.11□□□□□ -2.23
KRT39Q6A163 Y_RNA.158-201ENST00000363651 101 ntBASIC1.11□□□□□ -2.23
KRT39Q6A163 Y_RNA.380-201ENST00000365663 111 ntBASIC1.11□□□□□ -2.23
KRT39Q6A163 MIR19B1-201ENST00000384829 87 ntBASIC1.11□□□□□ -2.23
KRT39Q6A163 MIR136-201ENST00000385207 82 ntBASIC1.11□□□□□ -2.23
KRT39Q6A163 MIR1278-201ENST00000408753 81 ntBASIC1.11□□□□□ -2.23
KRT39Q6A163 SNORA36B-201ENST00000410438 131 ntBASIC1.11□□□□□ -2.23
KRT39Q6A163 MTCO1P5-201ENST00000433573 344 ntBASIC1.11□□□□□ -2.23
KRT39Q6A163 AL118496.2-201ENST00000448300 230 ntBASIC1.11□□□□□ -2.23
KRT39Q6A163 AC245047.8-201ENST00000456455 284 ntBASIC1.11□□□□□ -2.23
KRT39Q6A163 RNU6-437P-201ENST00000459408 95 ntBASIC1.11□□□□□ -2.23
KRT39Q6A163 OR2A41P-201ENST00000473586 105 ntBASIC1.11□□□□□ -2.23
KRT39Q6A163 RNU6-764P-201ENST00000516396 105 ntBASIC1.11□□□□□ -2.23
KRT39Q6A163 AC113195.1-201ENST00000579952 141 ntBASIC1.11□□□□□ -2.23
KRT39Q6A163 AL360085.1-201ENST00000604713 532 ntBASIC1.11□□□□□ -2.23
KRT39Q6A163 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.1□□□□□ -2.23
KRT39Q6A163 Y_RNA.202-201ENST00000364083 110 ntBASIC1.1□□□□□ -2.23
KRT39Q6A163 SNORA70.7-201ENST00000384159 133 ntBASIC1.1□□□□□ -2.23
KRT39Q6A163 RNU6-738P-201ENST00000384531 106 ntBASIC1.1□□□□□ -2.23
KRT39Q6A163 Y_RNA.527-201ENST00000384573 102 ntBASIC1.1□□□□□ -2.23
KRT39Q6A163 MIR606-201ENST00000384851 96 ntBASIC1.1□□□□□ -2.23
KRT39Q6A163 SNORD12-201ENST00000391002 90 ntBASIC1.1□□□□□ -2.23
KRT39Q6A163 RNU6-1248P-201ENST00000391096 64 ntBASIC1.1□□□□□ -2.23
KRT39Q6A163 SNORA75.2-201ENST00000391138 150 ntBASIC1.1□□□□□ -2.23
KRT39Q6A163 SNORA75.3-201ENST00000391231 150 ntBASIC1.1□□□□□ -2.23
KRT39Q6A163 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.1□□□□□ -2.23
KRT39Q6A163 ELOCP20-201ENST00000422460 345 ntBASIC1.1□□□□□ -2.23
KRT39Q6A163 SNRPGP14-201ENST00000435400 219 ntBASIC1.1□□□□□ -2.23
KRT39Q6A163 AC005840.1-201ENST00000498412 377 ntBASIC1.1□□□□□ -2.23
KRT39Q6A163 RNU6-1053P-201ENST00000515930 101 ntBASIC1.1□□□□□ -2.23
KRT39Q6A163 Y_RNA.714-201ENST00000517065 90 ntBASIC1.1□□□□□ -2.23
KRT39Q6A163 AC131281.1-201ENST00000522984 164 ntBASIC1.1□□□□□ -2.23
KRT39Q6A163 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.1□□□□□ -2.23
KRT39Q6A163 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.1□□□□□ -2.23
KRT39Q6A163 AC087685.1-201ENST00000587507 141 ntBASIC1.1□□□□□ -2.23
KRT39Q6A163 PRELID3BP2-201ENST00000605362 201 ntBASIC1.1□□□□□ -2.23
KRT39Q6A163 JPX_2.1-201ENST00000614161 69 ntBASIC1.1□□□□□ -2.23
KRT39Q6A163 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
KRT39Q6A163 Y_RNA.26-201ENST00000362539 101 ntBASIC1.09□□□□□ -2.23
KRT39Q6A163 snoU2_19.2-201ENST00000363024 80 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 213.5 ms