Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 SNORD115-34-201ENST00000362441 82 ntBASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 RNU6-545P-201ENST00000362681 104 ntBASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 RNU1-141P-201ENST00000364623 158 ntBASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 AC019178.2-201ENST00000423595 505 ntBASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 AL359672.1-201ENST00000442302 409 ntBASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 U8.19-201ENST00000459095 133 ntBASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 RPL7P42-201ENST00000481005 679 ntBASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 RNA5SP135-201ENST00000517019 125 ntBASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 AC068339.1-201ENST00000526965 141 ntBASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 MIR4491-201ENST00000581087 68 ntBASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 MIR4473-201ENST00000583731 91 ntBASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 AC087683.1-201ENST00000591187 441 ntBASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 MIR6082-201ENST00000613604 109 ntBASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 AL136221.1-201ENST00000621449 509 ntBASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 RNU6-543P-201ENST00000362576 108 ntBASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 AL390729.2-201ENST00000416137 156 ntBASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 AC007283.2-201ENST00000424739 197 ntBASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 RNU2-34P-201ENST00000516534 121 ntBASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 RNU6-765P-201ENST00000516916 99 ntBASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 RPL17P51-201ENST00000605218 238 ntBASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 SNORD115-40-201ENST00000606510 82 ntBASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC-1.18□□□□□ -2.6
RIF1Q5UIP0 RNA5SP26-201ENST00000362406 119 ntBASIC-1.19□□□□□ -2.6
RIF1Q5UIP0 SNORD115-25-201ENST00000362619 82 ntBASIC-1.19□□□□□ -2.6
RIF1Q5UIP0 AC117470.1-201ENST00000381974 330 ntBASIC-1.19□□□□□ -2.6
RIF1Q5UIP0 RNU6-571P-201ENST00000384128 107 ntBASIC-1.19□□□□□ -2.6
RIF1Q5UIP0 USP9YP28-201ENST00000435142 589 ntBASIC-1.19□□□□□ -2.6
RIF1Q5UIP0 MTND1P26-201ENST00000440488 538 ntBASIC-1.19□□□□□ -2.6
RIF1Q5UIP0 AC074290.1-201ENST00000448883 135 ntBASIC-1.19□□□□□ -2.6
RIF1Q5UIP0 AC013470.1-201ENST00000453438 462 ntBASIC-1.19□□□□□ -2.6
RIF1Q5UIP0 AC025647.1-201ENST00000517879 253 ntBASIC-1.19□□□□□ -2.6
RIF1Q5UIP0 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.19□□□□□ -2.6
RIF1Q5UIP0 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.19□□□□□ -2.6
RIF1Q5UIP0 PART1_1.1-201ENST00000611761 217 ntBASIC-1.19□□□□□ -2.6
RIF1Q5UIP0 RNU6-926P-201ENST00000384075 107 ntBASIC-1.2□□□□□ -2.6
RIF1Q5UIP0 RNU6-746P-201ENST00000384112 109 ntBASIC-1.2□□□□□ -2.6
RIF1Q5UIP0 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.2□□□□□ -2.6
RIF1Q5UIP0 SNORD28B-201ENST00000390993 75 ntBASIC-1.2□□□□□ -2.6
RIF1Q5UIP0 SNORA75.4-201ENST00000391278 119 ntBASIC-1.2□□□□□ -2.6
RIF1Q5UIP0 AL359634.1-202ENST00000404721 284 ntBASIC-1.2□□□□□ -2.6
RIF1Q5UIP0 snoU13.10-201ENST00000459301 103 ntBASIC-1.2□□□□□ -2.6
RIF1Q5UIP0 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-1.2□□□□□ -2.6
RIF1Q5UIP0 MTND1P8-201ENST00000571424 950 ntBASIC-1.2□□□□□ -2.6
RIF1Q5UIP0 AP001033.2-201ENST00000609701 1003 ntBASIC-1.2□□□□□ -2.6
RIF1Q5UIP0 RNU4-92P-201ENST00000363783 136 ntBASIC-1.2□□□□□ -2.6
RIF1Q5UIP0 RNU4-20P-201ENST00000365601 151 ntBASIC-1.2□□□□□ -2.6
RIF1Q5UIP0 RNU6-1026P-201ENST00000384465 108 ntBASIC-1.2□□□□□ -2.6
RIF1Q5UIP0 Z98949.2-201ENST00000440996 144 ntBASIC-1.2□□□□□ -2.6
RIF1Q5UIP0 SERF1AP1-201ENST00000514575 187 ntBASIC-1.2□□□□□ -2.6
RIF1Q5UIP0 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.2□□□□□ -2.6
RIF1Q5UIP0 RNU7-128P-201ENST00000517247 62 ntBASIC-1.2□□□□□ -2.6
RIF1Q5UIP0 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.2□□□□□ -2.6
RIF1Q5UIP0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.2□□□□□ -2.6
RIF1Q5UIP0 RNU6-562P-201ENST00000362731 107 ntBASIC-1.21□□□□□ -2.6
RIF1Q5UIP0 RNU6-166P-201ENST00000384371 107 ntBASIC-1.21□□□□□ -2.6
RIF1Q5UIP0 RNU6-665P-201ENST00000384639 107 ntBASIC-1.21□□□□□ -2.6
RIF1Q5UIP0 AL008987.1-201ENST00000415528 237 ntBASIC-1.21□□□□□ -2.6
RIF1Q5UIP0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-1.21□□□□□ -2.6
RIF1Q5UIP0 RNU7-14P-201ENST00000459331 62 ntBASIC-1.21□□□□□ -2.6
RIF1Q5UIP0 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.21□□□□□ -2.6
RIF1Q5UIP0 SNORD116-30-201ENST00000516468 85 ntBASIC-1.21□□□□□ -2.6
RIF1Q5UIP0 AC091178.2-201ENST00000584401 117 ntBASIC-1.21□□□□□ -2.6
RIF1Q5UIP0 VN1R88P-201ENST00000596787 292 ntBASIC-1.21□□□□□ -2.6
RIF1Q5UIP0 AC091946.2-201ENST00000606105 291 ntBASIC-1.21□□□□□ -2.6
RIF1Q5UIP0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.21□□□□□ -2.6
RIF1Q5UIP0 RNU6-1339P-201ENST00000363574 91 ntBASIC-1.21□□□□□ -2.6
RIF1Q5UIP0 RNU6-740P-201ENST00000364734 105 ntBASIC-1.21□□□□□ -2.6
RIF1Q5UIP0 SNORD38B-201ENST00000384690 67 ntBASIC-1.21□□□□□ -2.6
RIF1Q5UIP0 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.21□□□□□ -2.6
RIF1Q5UIP0 RNU6-685P-201ENST00000517088 95 ntBASIC-1.21□□□□□ -2.6
RIF1Q5UIP0 AL359880.1-201ENST00000621879 266 ntBASIC-1.21□□□□□ -2.6
RIF1Q5UIP0 Y_RNA.376-201ENST00000365638 108 ntBASIC-1.22□□□□□ -2.6
RIF1Q5UIP0 MIR544A-201ENST00000384855 91 ntBASIC-1.22□□□□□ -2.6
RIF1Q5UIP0 RNU7-57P-201ENST00000459540 60 ntBASIC-1.22□□□□□ -2.6
RIF1Q5UIP0 RNU7-99P-201ENST00000516271 62 ntBASIC-1.22□□□□□ -2.6
RIF1Q5UIP0 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.22□□□□□ -2.6
RIF1Q5UIP0 RNU6-1315P-201ENST00000517187 99 ntBASIC-1.22□□□□□ -2.6
RIF1Q5UIP0 SNORA40.17-201ENST00000517256 115 ntBASIC-1.22□□□□□ -2.6
RIF1Q5UIP0 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.22□□□□□ -2.6
RIF1Q5UIP0 AC005520.5-201ENST00000613926 164 ntBASIC-1.22□□□□□ -2.6
RIF1Q5UIP0 RNU6-208P-201ENST00000362431 107 ntBASIC-1.22□□□□□ -2.6
RIF1Q5UIP0 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.22□□□□□ -2.6
RIF1Q5UIP0 MIR15B-201ENST00000385045 98 ntBASIC-1.22□□□□□ -2.6
RIF1Q5UIP0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-1.22□□□□□ -2.6
RIF1Q5UIP0 RNU2-9P-201ENST00000410194 145 ntBASIC-1.22□□□□□ -2.6
RIF1Q5UIP0 RNU7-188P-201ENST00000517063 64 ntBASIC-1.22□□□□□ -2.6
RIF1Q5UIP0 EIF1AXP2-201ENST00000555940 413 ntBASIC-1.22□□□□□ -2.6
RIF1Q5UIP0 MIR4637-201ENST00000582405 84 ntBASIC-1.22□□□□□ -2.6
RIF1Q5UIP0 AC093783.1-201ENST00000612976 329 ntBASIC-1.22□□□□□ -2.6
RIF1Q5UIP0 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.23□□□□□ -2.61
RIF1Q5UIP0 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.23□□□□□ -2.61
RIF1Q5UIP0 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.23□□□□□ -2.61
RIF1Q5UIP0 RNA5SP245-201ENST00000364239 121 ntBASIC-1.23□□□□□ -2.61
RIF1Q5UIP0 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.23□□□□□ -2.61
RIF1Q5UIP0 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.23□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms