Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 SNORA24-201ENST00000384096 131 ntBASIC-1.42□□□□□ -2.64
NUP188Q5SRE5 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.42□□□□□ -2.64
NUP188Q5SRE5 AP003181.2-201ENST00000528941 181 ntBASIC-1.42□□□□□ -2.64
NUP188Q5SRE5 AL356055.1-201ENST00000602528 446 ntBASIC-1.42□□□□□ -2.64
NUP188Q5SRE5 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.43□□□□□ -2.64
NUP188Q5SRE5 RNU6-901P-201ENST00000384593 106 ntBASIC-1.43□□□□□ -2.64
NUP188Q5SRE5 RNU6-274P-201ENST00000459566 107 ntBASIC-1.43□□□□□ -2.64
NUP188Q5SRE5 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.43□□□□□ -2.64
NUP188Q5SRE5 BNIP3P40-201ENST00000596017 556 ntBASIC-1.43□□□□□ -2.64
NUP188Q5SRE5 AC073648.5-201ENST00000603502 305 ntBASIC-1.43□□□□□ -2.64
NUP188Q5SRE5 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.43□□□□□ -2.64
NUP188Q5SRE5 RNU6-266P-201ENST00000364225 107 ntBASIC-1.43□□□□□ -2.64
NUP188Q5SRE5 MIR518B-201ENST00000385127 83 ntBASIC-1.43□□□□□ -2.64
NUP188Q5SRE5 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.43□□□□□ -2.64
NUP188Q5SRE5 uc_338.19-201ENST00000616808 99 ntBASIC-1.43□□□□□ -2.64
NUP188Q5SRE5 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.44□□□□□ -2.64
NUP188Q5SRE5 RNU6-455P-201ENST00000384681 107 ntBASIC-1.44□□□□□ -2.64
NUP188Q5SRE5 MIR181B2-201ENST00000385004 89 ntBASIC-1.44□□□□□ -2.64
NUP188Q5SRE5 RNA5SP475-201ENST00000410568 110 ntBASIC-1.44□□□□□ -2.64
NUP188Q5SRE5 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.44□□□□□ -2.64
NUP188Q5SRE5 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.44□□□□□ -2.64
NUP188Q5SRE5 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.44□□□□□ -2.64
NUP188Q5SRE5 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.44□□□□□ -2.64
NUP188Q5SRE5 RNU2-69P-201ENST00000516061 100 ntBASIC-1.44□□□□□ -2.64
NUP188Q5SRE5 UBL5P4-201ENST00000562584 236 ntBASIC-1.44□□□□□ -2.64
NUP188Q5SRE5 AC090616.2-202ENST00000584248 222 ntBASIC-1.44□□□□□ -2.64
NUP188Q5SRE5 AC006386.1-201ENST00000619436 415 ntBASIC-1.44□□□□□ -2.64
NUP188Q5SRE5 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.45□□□□□ -2.64
NUP188Q5SRE5 SNORD116-12-201ENST00000384468 92 ntBASIC-1.45□□□□□ -2.64
NUP188Q5SRE5 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.45□□□□□ -2.64
NUP188Q5SRE5 AL590002.1-201ENST00000406554 418 ntBASIC-1.45□□□□□ -2.64
NUP188Q5SRE5 RNU7-138P-201ENST00000459479 64 ntBASIC-1.45□□□□□ -2.64
NUP188Q5SRE5 SNORA25.13-201ENST00000516395 103 ntBASIC-1.45□□□□□ -2.64
NUP188Q5SRE5 MTND1P24-201ENST00000552175 861 ntBASIC-1.45□□□□□ -2.64
NUP188Q5SRE5 MIR4775-201ENST00000581168 75 ntBASIC-1.45□□□□□ -2.64
NUP188Q5SRE5 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.45□□□□□ -2.64
NUP188Q5SRE5 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.46□□□□□ -2.64
NUP188Q5SRE5 RNU6-268P-201ENST00000364174 107 ntBASIC-1.46□□□□□ -2.64
NUP188Q5SRE5 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.46□□□□□ -2.64
NUP188Q5SRE5 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.46□□□□□ -2.64
NUP188Q5SRE5 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.46□□□□□ -2.64
NUP188Q5SRE5 AC074085.1-201ENST00000413598 418 ntBASIC-1.46□□□□□ -2.64
NUP188Q5SRE5 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.46□□□□□ -2.64
NUP188Q5SRE5 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.46□□□□□ -2.64
NUP188Q5SRE5 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.46□□□□□ -2.64
NUP188Q5SRE5 Z97988.1-201ENST00000637697 135 ntBASIC-1.46□□□□□ -2.64
NUP188Q5SRE5 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.46□□□□□ -2.64
NUP188Q5SRE5 SNRPGP14-201ENST00000435400 219 ntBASIC-1.46□□□□□ -2.64
NUP188Q5SRE5 MTND1P11-201ENST00000456661 876 ntBASIC-1.46□□□□□ -2.64
NUP188Q5SRE5 GMFBP1-201ENST00000467831 427 ntBASIC-1.46□□□□□ -2.64
NUP188Q5SRE5 RNU7-188P-201ENST00000517063 64 ntBASIC-1.46□□□□□ -2.64
NUP188Q5SRE5 MTATP6P15-201ENST00000527233 835 ntBASIC-1.46□□□□□ -2.64
NUP188Q5SRE5 AC126544.2-201ENST00000625174 749 ntBASIC-1.46□□□□□ -2.64
NUP188Q5SRE5 SEPT14P19-203ENST00000633205 211 ntBASIC-1.46□□□□□ -2.64
NUP188Q5SRE5 RNA5SP245-201ENST00000364239 121 ntBASIC-1.47□□□□□ -2.64
NUP188Q5SRE5 MIR1-2-201ENST00000384961 85 ntBASIC-1.47□□□□□ -2.64
NUP188Q5SRE5 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.47□□□□□ -2.64
NUP188Q5SRE5 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.47□□□□□ -2.64
NUP188Q5SRE5 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.47□□□□□ -2.64
NUP188Q5SRE5 AC131281.1-201ENST00000522984 164 ntBASIC-1.47□□□□□ -2.64
NUP188Q5SRE5 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.48□□□□□ -2.65
NUP188Q5SRE5 SNORD14E-201ENST00000364009 85 ntBASIC-1.48□□□□□ -2.65
NUP188Q5SRE5 RNU6-865P-201ENST00000364772 107 ntBASIC-1.48□□□□□ -2.65
NUP188Q5SRE5 RNU6-413P-201ENST00000384115 107 ntBASIC-1.48□□□□□ -2.65
NUP188Q5SRE5 MIR450B-201ENST00000401182 78 ntBASIC-1.48□□□□□ -2.65
NUP188Q5SRE5 RNU6-721P-201ENST00000410155 105 ntBASIC-1.48□□□□□ -2.65
NUP188Q5SRE5 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.48□□□□□ -2.65
NUP188Q5SRE5 USP9YP16-201ENST00000430287 407 ntBASIC-1.48□□□□□ -2.65
NUP188Q5SRE5 AL500527.2-201ENST00000454105 95 ntBASIC-1.48□□□□□ -2.65
NUP188Q5SRE5 AC064836.2-201ENST00000609491 462 ntBASIC-1.48□□□□□ -2.65
NUP188Q5SRE5 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.49□□□□□ -2.65
NUP188Q5SRE5 SNORD41.1-201ENST00000391000 69 ntBASIC-1.49□□□□□ -2.65
NUP188Q5SRE5 RPL30P15-201ENST00000457129 321 ntBASIC-1.49□□□□□ -2.65
NUP188Q5SRE5 SNORD38.3-201ENST00000516599 73 ntBASIC-1.49□□□□□ -2.65
NUP188Q5SRE5 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.49□□□□□ -2.65
NUP188Q5SRE5 AC011458.1-201ENST00000604034 617 ntBASIC-1.49□□□□□ -2.65
NUP188Q5SRE5 AL391834.2-201ENST00000609982 546 ntBASIC-1.49□□□□□ -2.65
NUP188Q5SRE5 AC068880.4-201ENST00000623082 495 ntBASIC-1.49□□□□□ -2.65
NUP188Q5SRE5 MTND5P18-201ENST00000445624 1801 ntBASIC-1.49□□□□□ -2.65
NUP188Q5SRE5 Y_RNA.97-201ENST00000363094 102 ntBASIC-1.49□□□□□ -2.65
NUP188Q5SRE5 USP9YP12-201ENST00000450481 570 ntBASIC-1.49□□□□□ -2.65
NUP188Q5SRE5 AC105417.1-201ENST00000514691 285 ntBASIC-1.49□□□□□ -2.65
NUP188Q5SRE5 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.49□□□□□ -2.65
NUP188Q5SRE5 MTND4LP18-201ENST00000526864 291 ntBASIC-1.49□□□□□ -2.65
NUP188Q5SRE5 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.49□□□□□ -2.65
NUP188Q5SRE5 MIR4423-201ENST00000580922 80 ntBASIC-1.49□□□□□ -2.65
NUP188Q5SRE5 AC005828.6-201ENST00000606610 232 ntBASIC-1.49□□□□□ -2.65
NUP188Q5SRE5 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.49□□□□□ -2.65
NUP188Q5SRE5 MIR1246-201ENST00000636535 73 ntBASIC-1.49□□□□□ -2.65
NUP188Q5SRE5 SNORD12C-201ENST00000386307 89 ntBASIC-1.5□□□□□ -2.65
NUP188Q5SRE5 MTATP6P18-201ENST00000417994 673 ntBASIC-1.5□□□□□ -2.65
NUP188Q5SRE5 SCARNA18B-201ENST00000458806 135 ntBASIC-1.5□□□□□ -2.65
NUP188Q5SRE5 AC112204.1-201ENST00000502591 103 ntBASIC-1.5□□□□□ -2.65
NUP188Q5SRE5 MIR3179-1-201ENST00000578940 84 ntBASIC-1.5□□□□□ -2.65
NUP188Q5SRE5 MIR3179-2-201ENST00000579107 84 ntBASIC-1.5□□□□□ -2.65
NUP188Q5SRE5 MIR3179-3-201ENST00000579566 84 ntBASIC-1.5□□□□□ -2.65
NUP188Q5SRE5 MIR3179-4-201ENST00000617599 84 ntBASIC-1.5□□□□□ -2.65
NUP188Q5SRE5 AP002371.2-201ENST00000624450 503 ntBASIC-1.5□□□□□ -2.65
NUP188Q5SRE5 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.51□□□□□ -2.65
NUP188Q5SRE5 SNORD114-29-201ENST00000364819 70 ntBASIC-1.51□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms