Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 RNU6-239P-201ENST00000390990 99 ntBASIC2.33□□□□□ -2.04
CCDC178Q5BJE1 SNRPGP8-201ENST00000454064 226 ntBASIC2.33□□□□□ -2.04
CCDC178Q5BJE1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC178Q5BJE1 RNA5SP182-201ENST00000516064 82 ntBASIC2.33□□□□□ -2.04
CCDC178Q5BJE1 AL021707.8-201ENST00000609428 183 ntBASIC2.33□□□□□ -2.04
CCDC178Q5BJE1 AL591926.4-201ENST00000616895 298 ntBASIC2.33□□□□□ -2.04
CCDC178Q5BJE1 Y_RNA.265-201ENST00000364677 108 ntBASIC2.32□□□□□ -2.04
CCDC178Q5BJE1 RNA5SP160-201ENST00000364866 120 ntBASIC2.32□□□□□ -2.04
CCDC178Q5BJE1 Y_RNA.432-201ENST00000384087 111 ntBASIC2.32□□□□□ -2.04
CCDC178Q5BJE1 RNY3P5-201ENST00000384127 102 ntBASIC2.32□□□□□ -2.04
CCDC178Q5BJE1 MIR562-201ENST00000384894 95 ntBASIC2.32□□□□□ -2.04
CCDC178Q5BJE1 MIR17-201ENST00000385012 84 ntBASIC2.32□□□□□ -2.04
CCDC178Q5BJE1 RNA5SP465-201ENST00000391195 109 ntBASIC2.32□□□□□ -2.04
CCDC178Q5BJE1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC178Q5BJE1 RNU6-717P-201ENST00000459076 104 ntBASIC2.32□□□□□ -2.04
CCDC178Q5BJE1 SNORD11-201ENST00000459124 84 ntBASIC2.32□□□□□ -2.04
CCDC178Q5BJE1 RNA5SP233-201ENST00000459153 113 ntBASIC2.32□□□□□ -2.04
CCDC178Q5BJE1 snoU13.26-201ENST00000459452 105 ntBASIC2.32□□□□□ -2.04
CCDC178Q5BJE1 UBL5P3-201ENST00000475112 231 ntBASIC2.32□□□□□ -2.04
CCDC178Q5BJE1 AC005840.1-201ENST00000498412 377 ntBASIC2.32□□□□□ -2.04
CCDC178Q5BJE1 MIR5089-201ENST00000580047 84 ntBASIC2.32□□□□□ -2.04
CCDC178Q5BJE1 MTND1P7-201ENST00000632801 297 ntBASIC2.32□□□□□ -2.04
CCDC178Q5BJE1 MIR3658-201ENST00000636291 56 ntBASIC2.32□□□□□ -2.04
CCDC178Q5BJE1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC178Q5BJE1 RNU6-1019P-201ENST00000364424 107 ntBASIC2.31□□□□□ -2.04
CCDC178Q5BJE1 RNU6-818P-201ENST00000364837 108 ntBASIC2.31□□□□□ -2.04
CCDC178Q5BJE1 SNORD37.2-201ENST00000391075 66 ntBASIC2.31□□□□□ -2.04
CCDC178Q5BJE1 RNU2-70P-201ENST00000410718 179 ntBASIC2.31□□□□□ -2.04
CCDC178Q5BJE1 RNU2-7P-201ENST00000410794 178 ntBASIC2.31□□□□□ -2.04
CCDC178Q5BJE1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC178Q5BJE1 CYCSP49-201ENST00000420810 319 ntBASIC2.31□□□□□ -2.04
CCDC178Q5BJE1 STAG3L5P-204ENST00000443759 179 ntBASIC2.31□□□□□ -2.04
CCDC178Q5BJE1 RNU6-1299P-201ENST00000516316 100 ntBASIC2.31□□□□□ -2.04
CCDC178Q5BJE1 SNORD116-25-201ENST00000516517 92 ntBASIC2.31□□□□□ -2.04
CCDC178Q5BJE1 RNU7-193P-201ENST00000516723 65 ntBASIC2.31□□□□□ -2.04
CCDC178Q5BJE1 RNU7-149P-201ENST00000516739 59 ntBASIC2.31□□□□□ -2.04
CCDC178Q5BJE1 MIR6715A-201ENST00000615929 79 ntBASIC2.31□□□□□ -2.04
CCDC178Q5BJE1 Pinc.1-201ENST00000616452 154 ntBASIC2.31□□□□□ -2.04
CCDC178Q5BJE1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC178Q5BJE1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC178Q5BJE1 MIR802-201ENST00000390235 94 ntBASIC2.3□□□□□ -2.04
CCDC178Q5BJE1 RNU6-131P-201ENST00000391144 107 ntBASIC2.3□□□□□ -2.04
CCDC178Q5BJE1 RNA5SP501-201ENST00000410990 112 ntBASIC2.3□□□□□ -2.04
CCDC178Q5BJE1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CCDC178Q5BJE1 ZNF702P-202ENST00000434269 1966 ntBASIC2.29□□□□□ -2.04
CCDC178Q5BJE1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC178Q5BJE1 RNU6-199P-201ENST00000362954 107 ntBASIC2.29□□□□□ -2.04
CCDC178Q5BJE1 SNORA16B-201ENST00000364674 135 ntBASIC2.29□□□□□ -2.04
CCDC178Q5BJE1 RNU4-11P-201ENST00000365287 132 ntBASIC2.29□□□□□ -2.04
CCDC178Q5BJE1 Y_RNA.337-201ENST00000365312 102 ntBASIC2.29□□□□□ -2.04
CCDC178Q5BJE1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CCDC178Q5BJE1 RNU2-40P-201ENST00000410833 196 ntBASIC2.29□□□□□ -2.04
CCDC178Q5BJE1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CCDC178Q5BJE1 AC245047.4-201ENST00000433189 144 ntBASIC2.29□□□□□ -2.04
CCDC178Q5BJE1 NDUFA4P2-201ENST00000489989 244 ntBASIC2.29□□□□□ -2.04
CCDC178Q5BJE1 OR9P1P-201ENST00000496431 281 ntBASIC2.29□□□□□ -2.04
CCDC178Q5BJE1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC178Q5BJE1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC178Q5BJE1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
CCDC178Q5BJE1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
CCDC178Q5BJE1 RNU6-440P-201ENST00000390882 105 ntBASIC2.28□□□□□ -2.04
CCDC178Q5BJE1 Y_RNA.580-201ENST00000391004 95 ntBASIC2.28□□□□□ -2.04
CCDC178Q5BJE1 RNA5SP338-201ENST00000410495 85 ntBASIC2.28□□□□□ -2.04
CCDC178Q5BJE1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC178Q5BJE1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC178Q5BJE1 RPS27P1-201ENST00000450552 247 ntBASIC2.28□□□□□ -2.04
CCDC178Q5BJE1 SNORD77.4-201ENST00000516158 81 ntBASIC2.28□□□□□ -2.04
CCDC178Q5BJE1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC178Q5BJE1 Y_RNA.778-201ENST00000620203 90 ntBASIC2.28□□□□□ -2.04
CCDC178Q5BJE1 MIR8054-201ENST00000620877 86 ntBASIC2.28□□□□□ -2.04
CCDC178Q5BJE1 uc_338.20-201ENST00000621563 178 ntBASIC2.28□□□□□ -2.04
CCDC178Q5BJE1 RNU6-1084P-201ENST00000362498 107 ntBASIC2.27□□□□□ -2.05
CCDC178Q5BJE1 Y_RNA.91-201ENST00000363042 107 ntBASIC2.27□□□□□ -2.05
CCDC178Q5BJE1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CCDC178Q5BJE1 SNORD72-201ENST00000390994 80 ntBASIC2.27□□□□□ -2.05
CCDC178Q5BJE1 MRPS17P9-201ENST00000511924 393 ntBASIC2.27□□□□□ -2.05
CCDC178Q5BJE1 RNA5SP272-201ENST00000516095 111 ntBASIC2.27□□□□□ -2.05
CCDC178Q5BJE1 Y_RNA.714-201ENST00000517065 90 ntBASIC2.27□□□□□ -2.05
CCDC178Q5BJE1 AL358944.1-201ENST00000528537 144 ntBASIC2.27□□□□□ -2.05
CCDC178Q5BJE1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC178Q5BJE1 AC104984.5-201ENST00000586878 94 ntBASIC2.27□□□□□ -2.05
CCDC178Q5BJE1 DNAJC19P2-201ENST00000593340 302 ntBASIC2.27□□□□□ -2.05
CCDC178Q5BJE1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.27□□□□□ -2.05
CCDC178Q5BJE1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC178Q5BJE1 Y_RNA.215-201ENST00000364204 112 ntBASIC2.26□□□□□ -2.05
CCDC178Q5BJE1 SNORA4.2-201ENST00000365313 147 ntBASIC2.26□□□□□ -2.05
CCDC178Q5BJE1 Y_RNA.400-201ENST00000383963 111 ntBASIC2.26□□□□□ -2.05
CCDC178Q5BJE1 RNU6-484P-201ENST00000384016 107 ntBASIC2.26□□□□□ -2.05
CCDC178Q5BJE1 Y_RNA.488-201ENST00000384403 102 ntBASIC2.26□□□□□ -2.05
CCDC178Q5BJE1 RNU6-768P-201ENST00000384683 107 ntBASIC2.26□□□□□ -2.05
CCDC178Q5BJE1 HSPE1P9-201ENST00000440046 311 ntBASIC2.26□□□□□ -2.05
CCDC178Q5BJE1 SNORA25.12-201ENST00000516202 82 ntBASIC2.26□□□□□ -2.05
CCDC178Q5BJE1 RNU6-197P-201ENST00000516680 100 ntBASIC2.26□□□□□ -2.05
CCDC178Q5BJE1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC178Q5BJE1 MIR4529-201ENST00000578110 78 ntBASIC2.26□□□□□ -2.05
CCDC178Q5BJE1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.26□□□□□ -2.05
CCDC178Q5BJE1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC178Q5BJE1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
CCDC178Q5BJE1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CCDC178Q5BJE1 RNA5SP138-201ENST00000365098 114 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms