Protein–RNA interactions for Protein: Q53GS9

USP39, U4/U6.U5 tri-snRNP-associated protein 2, humanhuman

Known RBP Predictions only

Length 565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP39Q53GS9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.49□□□□□ -2.01
USP39Q53GS9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
USP39Q53GS9 MTND5P18-201ENST00000445624 1801 ntBASIC2.48□□□□□ -2.01
USP39Q53GS9 MIR340-201ENST00000362125 95 ntBASIC2.48□□□□□ -2.01
USP39Q53GS9 RNU1-91P-201ENST00000364746 163 ntBASIC2.48□□□□□ -2.01
USP39Q53GS9 Y_RNA.346-201ENST00000365385 112 ntBASIC2.48□□□□□ -2.01
USP39Q53GS9 RNU6-438P-201ENST00000365561 103 ntBASIC2.48□□□□□ -2.01
USP39Q53GS9 SNORA1-201ENST00000384107 130 ntBASIC2.48□□□□□ -2.01
USP39Q53GS9 RNU6-880P-201ENST00000384526 107 ntBASIC2.48□□□□□ -2.01
USP39Q53GS9 SNORA26-201ENST00000391286 122 ntBASIC2.48□□□□□ -2.01
USP39Q53GS9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
USP39Q53GS9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.48□□□□□ -2.01
USP39Q53GS9 AC023449.1-201ENST00000454464 154 ntBASIC2.48□□□□□ -2.01
USP39Q53GS9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.48□□□□□ -2.01
USP39Q53GS9 snoU13.23-201ENST00000458863 104 ntBASIC2.48□□□□□ -2.01
USP39Q53GS9 SNORA18.4-201ENST00000516440 124 ntBASIC2.48□□□□□ -2.01
USP39Q53GS9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.48□□□□□ -2.01
USP39Q53GS9 DEFB122-202ENST00000569013 197 ntBASIC2.48□□□□□ -2.01
USP39Q53GS9 MIR4662B-201ENST00000579498 81 ntBASIC2.48□□□□□ -2.01
USP39Q53GS9 MIR5092-201ENST00000583139 88 ntBASIC2.48□□□□□ -2.01
USP39Q53GS9 U2.20-201ENST00000613956 192 ntBASIC2.48□□□□□ -2.01
USP39Q53GS9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.48□□□□□ -2.01
USP39Q53GS9 U6.73-201ENST00000619194 103 ntBASIC2.48□□□□□ -2.01
USP39Q53GS9 MIR203B-201ENST00000636080 86 ntBASIC2.48□□□□□ -2.01
USP39Q53GS9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
USP39Q53GS9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.47□□□□□ -2.01
USP39Q53GS9 MIR450A1-201ENST00000362262 91 ntBASIC2.47□□□□□ -2.01
USP39Q53GS9 Y_RNA.495-201ENST00000384435 112 ntBASIC2.47□□□□□ -2.01
USP39Q53GS9 AC018634.1-201ENST00000437554 401 ntBASIC2.47□□□□□ -2.01
USP39Q53GS9 MIR1273D-201ENST00000577266 86 ntBASIC2.47□□□□□ -2.01
USP39Q53GS9 MIR5582-201ENST00000579697 68 ntBASIC2.47□□□□□ -2.01
USP39Q53GS9 AC006254.2-201ENST00000603259 279 ntBASIC2.47□□□□□ -2.01
USP39Q53GS9 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.47□□□□□ -2.01
USP39Q53GS9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.46□□□□□ -2.02
USP39Q53GS9 Y_RNA.116-201ENST00000363292 103 ntBASIC2.46□□□□□ -2.02
USP39Q53GS9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.46□□□□□ -2.02
USP39Q53GS9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
USP39Q53GS9 AL021397.1-201ENST00000451806 248 ntBASIC2.46□□□□□ -2.02
USP39Q53GS9 MRPS17P9-201ENST00000511924 393 ntBASIC2.46□□□□□ -2.02
USP39Q53GS9 Y_RNA.694-201ENST00000516677 117 ntBASIC2.46□□□□□ -2.02
USP39Q53GS9 RNU6-365P-201ENST00000517113 106 ntBASIC2.46□□□□□ -2.02
USP39Q53GS9 RNA5SP490-201ENST00000517141 136 ntBASIC2.46□□□□□ -2.02
USP39Q53GS9 MIR3129-201ENST00000581095 76 ntBASIC2.46□□□□□ -2.02
USP39Q53GS9 uc_338.28-201ENST00000612082 187 ntBASIC2.46□□□□□ -2.02
USP39Q53GS9 RNU1-96P-201ENST00000364163 162 ntBASIC2.45□□□□□ -2.02
USP39Q53GS9 Y_RNA.332-201ENST00000365271 113 ntBASIC2.45□□□□□ -2.02
USP39Q53GS9 RNU6-106P-201ENST00000384405 107 ntBASIC2.45□□□□□ -2.02
USP39Q53GS9 RNU2-48P-201ENST00000410694 191 ntBASIC2.45□□□□□ -2.02
USP39Q53GS9 AC060773.1-201ENST00000421698 310 ntBASIC2.45□□□□□ -2.02
USP39Q53GS9 AF228730.3-201ENST00000436691 102 ntBASIC2.45□□□□□ -2.02
USP39Q53GS9 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.45□□□□□ -2.02
USP39Q53GS9 AC093259.1-201ENST00000509755 300 ntBASIC2.45□□□□□ -2.02
USP39Q53GS9 RNU6-126P-201ENST00000516685 103 ntBASIC2.45□□□□□ -2.02
USP39Q53GS9 RNA5SP82-201ENST00000516707 92 ntBASIC2.45□□□□□ -2.02
USP39Q53GS9 RNU6-856P-201ENST00000516959 98 ntBASIC2.45□□□□□ -2.02
USP39Q53GS9 RNU7-128P-201ENST00000517247 62 ntBASIC2.45□□□□□ -2.02
USP39Q53GS9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
USP39Q53GS9 RNA5SP456-201ENST00000364002 114 ntBASIC2.44□□□□□ -2.02
USP39Q53GS9 SNORD61-201ENST00000384252 73 ntBASIC2.44□□□□□ -2.02
USP39Q53GS9 MIR548A2-201ENST00000384956 97 ntBASIC2.44□□□□□ -2.02
USP39Q53GS9 RNU2-32P-201ENST00000411193 191 ntBASIC2.44□□□□□ -2.02
USP39Q53GS9 CALM2P4-201ENST00000430810 426 ntBASIC2.44□□□□□ -2.02
USP39Q53GS9 RNA5SP281-201ENST00000516504 135 ntBASIC2.44□□□□□ -2.02
USP39Q53GS9 RNU6-1096P-201ENST00000517089 102 ntBASIC2.44□□□□□ -2.02
USP39Q53GS9 AC015712.3-201ENST00000559380 164 ntBASIC2.44□□□□□ -2.02
USP39Q53GS9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.44□□□□□ -2.02
USP39Q53GS9 MIR6073-201ENST00000352083 89 ntBASIC2.43□□□□□ -2.02
USP39Q53GS9 RNU1-23P-201ENST00000363361 144 ntBASIC2.43□□□□□ -2.02
USP39Q53GS9 Y_RNA.281-201ENST00000364774 94 ntBASIC2.43□□□□□ -2.02
USP39Q53GS9 RNU6-1292P-201ENST00000383856 107 ntBASIC2.43□□□□□ -2.02
USP39Q53GS9 RNU6-32P-201ENST00000383948 107 ntBASIC2.43□□□□□ -2.02
USP39Q53GS9 RNU6-546P-201ENST00000383991 107 ntBASIC2.43□□□□□ -2.02
USP39Q53GS9 RNU6-13P-201ENST00000384248 107 ntBASIC2.43□□□□□ -2.02
USP39Q53GS9 RNU6-12P-201ENST00000384604 107 ntBASIC2.43□□□□□ -2.02
USP39Q53GS9 RNU6-41P-201ENST00000384741 107 ntBASIC2.43□□□□□ -2.02
USP39Q53GS9 MIR95-201ENST00000385072 81 ntBASIC2.43□□□□□ -2.02
USP39Q53GS9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
USP39Q53GS9 SNORD72-201ENST00000390994 80 ntBASIC2.43□□□□□ -2.02
USP39Q53GS9 AC123900.1-201ENST00000420390 96 ntBASIC2.43□□□□□ -2.02
USP39Q53GS9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.43□□□□□ -2.02
USP39Q53GS9 RPS12P2-201ENST00000439728 269 ntBASIC2.43□□□□□ -2.02
USP39Q53GS9 MTATP6P21-201ENST00000440681 189 ntBASIC2.43□□□□□ -2.02
USP39Q53GS9 AL031737.1-201ENST00000450125 223 ntBASIC2.43□□□□□ -2.02
USP39Q53GS9 AC108210.2-201ENST00000503681 201 ntBASIC2.43□□□□□ -2.02
USP39Q53GS9 RNU6-504P-201ENST00000516568 104 ntBASIC2.43□□□□□ -2.02
USP39Q53GS9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.43□□□□□ -2.02
USP39Q53GS9 AC073413.2-201ENST00000604332 360 ntBASIC2.43□□□□□ -2.02
USP39Q53GS9 SNORD14A-201ENST00000606526 91 ntBASIC2.43□□□□□ -2.02
USP39Q53GS9 JPX_2.1-201ENST00000614161 69 ntBASIC2.43□□□□□ -2.02
USP39Q53GS9 MIR6873-201ENST00000622788 63 ntBASIC2.43□□□□□ -2.02
USP39Q53GS9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USP39Q53GS9 RNU6-888P-201ENST00000363010 101 ntBASIC2.42□□□□□ -2.02
USP39Q53GS9 Y_RNA.253-201ENST00000364562 112 ntBASIC2.42□□□□□ -2.02
USP39Q53GS9 Y_RNA.369-201ENST00000365568 117 ntBASIC2.42□□□□□ -2.02
USP39Q53GS9 MIR218-1-201ENST00000384999 110 ntBASIC2.42□□□□□ -2.02
USP39Q53GS9 MIR520G-201ENST00000385064 90 ntBASIC2.42□□□□□ -2.02
USP39Q53GS9 MIR1263-201ENST00000408324 86 ntBASIC2.42□□□□□ -2.02
USP39Q53GS9 RNU6-554P-201ENST00000410466 106 ntBASIC2.42□□□□□ -2.02
USP39Q53GS9 AL591806.2-201ENST00000433122 173 ntBASIC2.42□□□□□ -2.02
USP39Q53GS9 SCARNA15-202ENST00000516881 127 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 204.4 ms