Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RPS29P28-201ENST00000446439 141 ntBASIC0.99□□□□□ -2.25
SHROOM1Q2M3G4 RPL39P39-201ENST00000455840 151 ntBASIC0.99□□□□□ -2.25
SHROOM1Q2M3G4 LINC01399-202ENST00000458450 244 ntBASIC0.99□□□□□ -2.25
SHROOM1Q2M3G4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.99□□□□□ -2.25
SHROOM1Q2M3G4 RNU6-1170P-201ENST00000515974 106 ntBASIC0.99□□□□□ -2.25
SHROOM1Q2M3G4 SNORD45.4-201ENST00000516629 73 ntBASIC0.99□□□□□ -2.25
SHROOM1Q2M3G4 MIR3192-201ENST00000584920 77 ntBASIC0.99□□□□□ -2.25
SHROOM1Q2M3G4 U8.7-201ENST00000364940 136 ntBASIC0.98□□□□□ -2.25
SHROOM1Q2M3G4 Y_RNA.310-201ENST00000365063 113 ntBASIC0.98□□□□□ -2.25
SHROOM1Q2M3G4 Y_RNA.424-201ENST00000384063 103 ntBASIC0.98□□□□□ -2.25
SHROOM1Q2M3G4 SNORA72-201ENST00000384339 132 ntBASIC0.98□□□□□ -2.25
SHROOM1Q2M3G4 Y_RNA.551-201ENST00000384661 102 ntBASIC0.98□□□□□ -2.25
SHROOM1Q2M3G4 MIR200A-201ENST00000384875 90 ntBASIC0.98□□□□□ -2.25
SHROOM1Q2M3G4 RNU6-710P-201ENST00000410424 105 ntBASIC0.98□□□□□ -2.25
SHROOM1Q2M3G4 snoU13.25-201ENST00000458945 104 ntBASIC0.98□□□□□ -2.25
SHROOM1Q2M3G4 SNORD111.1-201ENST00000516421 86 ntBASIC0.98□□□□□ -2.25
SHROOM1Q2M3G4 SNORA18.7-201ENST00000516910 131 ntBASIC0.98□□□□□ -2.25
SHROOM1Q2M3G4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.98□□□□□ -2.25
SHROOM1Q2M3G4 AC024405.2-202ENST00000532731 184 ntBASIC0.98□□□□□ -2.25
SHROOM1Q2M3G4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.98□□□□□ -2.25
SHROOM1Q2M3G4 AL138825.1-201ENST00000618587 192 ntBASIC0.98□□□□□ -2.25
SHROOM1Q2M3G4 AC027279.3-201ENST00000625055 122 ntBASIC0.98□□□□□ -2.25
SHROOM1Q2M3G4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
SHROOM1Q2M3G4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
SHROOM1Q2M3G4 RNU4-80P-201ENST00000363200 141 ntBASIC0.97□□□□□ -2.25
SHROOM1Q2M3G4 SNORD114-24-201ENST00000365029 72 ntBASIC0.97□□□□□ -2.25
SHROOM1Q2M3G4 Y_RNA.336-201ENST00000365307 109 ntBASIC0.97□□□□□ -2.25
SHROOM1Q2M3G4 Y_RNA.394-201ENST00000383942 103 ntBASIC0.97□□□□□ -2.25
SHROOM1Q2M3G4 Y_RNA.462-201ENST00000384268 102 ntBASIC0.97□□□□□ -2.25
SHROOM1Q2M3G4 RNU6-131P-201ENST00000391144 107 ntBASIC0.97□□□□□ -2.25
SHROOM1Q2M3G4 MIR1278-201ENST00000408753 81 ntBASIC0.97□□□□□ -2.25
SHROOM1Q2M3G4 MTND4P19-201ENST00000446659 478 ntBASIC0.97□□□□□ -2.25
SHROOM1Q2M3G4 RPL23AP54-201ENST00000495129 419 ntBASIC0.97□□□□□ -2.25
SHROOM1Q2M3G4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.97□□□□□ -2.25
SHROOM1Q2M3G4 MIR4653-201ENST00000585107 83 ntBASIC0.97□□□□□ -2.25
SHROOM1Q2M3G4 AL357312.1-201ENST00000603879 298 ntBASIC0.97□□□□□ -2.25
SHROOM1Q2M3G4 LARP7P1-201ENST00000605576 316 ntBASIC0.97□□□□□ -2.25
SHROOM1Q2M3G4 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
SHROOM1Q2M3G4 AC134026.1-201ENST00000623249 2239 ntBASIC0.96□□□□□ -2.26
SHROOM1Q2M3G4 SNORA25.3-201ENST00000363205 127 ntBASIC0.96□□□□□ -2.26
SHROOM1Q2M3G4 RNU4-50P-201ENST00000364361 141 ntBASIC0.96□□□□□ -2.26
SHROOM1Q2M3G4 U8.5-201ENST00000364528 136 ntBASIC0.96□□□□□ -2.26
SHROOM1Q2M3G4 RNU1-133P-201ENST00000364867 167 ntBASIC0.96□□□□□ -2.26
SHROOM1Q2M3G4 Y_RNA.383-201ENST00000383855 97 ntBASIC0.96□□□□□ -2.26
SHROOM1Q2M3G4 Y_RNA.393-201ENST00000383936 102 ntBASIC0.96□□□□□ -2.26
SHROOM1Q2M3G4 Y_RNA.445-201ENST00000384168 102 ntBASIC0.96□□□□□ -2.26
SHROOM1Q2M3G4 MIR452-201ENST00000385020 85 ntBASIC0.96□□□□□ -2.26
SHROOM1Q2M3G4 Y_RNA.602-201ENST00000410535 92 ntBASIC0.96□□□□□ -2.26
SHROOM1Q2M3G4 RNU2-14P-201ENST00000411053 191 ntBASIC0.96□□□□□ -2.26
SHROOM1Q2M3G4 RNU6-1054P-201ENST00000411293 104 ntBASIC0.96□□□□□ -2.26
SHROOM1Q2M3G4 AC090142.3-201ENST00000519012 385 ntBASIC0.96□□□□□ -2.26
SHROOM1Q2M3G4 AC022616.4-201ENST00000522985 181 ntBASIC0.96□□□□□ -2.26
SHROOM1Q2M3G4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.96□□□□□ -2.26
SHROOM1Q2M3G4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.96□□□□□ -2.26
SHROOM1Q2M3G4 MIR4762-201ENST00000585261 75 ntBASIC0.96□□□□□ -2.26
SHROOM1Q2M3G4 AC124312.5-201ENST00000604451 268 ntBASIC0.96□□□□□ -2.26
SHROOM1Q2M3G4 AC090971.5-201ENST00000621102 293 ntBASIC0.96□□□□□ -2.26
SHROOM1Q2M3G4 AL442644.1-201ENST00000454390 3105 ntBASIC0.96□□□□□ -2.26
SHROOM1Q2M3G4 MTND4P29-201ENST00000503122 1372 ntBASIC0.96□□□□□ -2.26
SHROOM1Q2M3G4 AC008163.1-202ENST00000636004 2889 ntBASIC0.95□□□□□ -2.26
SHROOM1Q2M3G4 RNU6-1323P-201ENST00000384025 107 ntBASIC0.95□□□□□ -2.26
SHROOM1Q2M3G4 Y_RNA.509-201ENST00000384506 99 ntBASIC0.95□□□□□ -2.26
SHROOM1Q2M3G4 Y_RNA.645-201ENST00000391229 102 ntBASIC0.95□□□□□ -2.26
SHROOM1Q2M3G4 MIR1302-11-201ENST00000408051 138 ntBASIC0.95□□□□□ -2.26
SHROOM1Q2M3G4 MIR1302-9-201ENST00000408365 138 ntBASIC0.95□□□□□ -2.26
SHROOM1Q2M3G4 MIR1302-10-201ENST00000408734 138 ntBASIC0.95□□□□□ -2.26
SHROOM1Q2M3G4 AC022028.1-201ENST00000412054 408 ntBASIC0.95□□□□□ -2.26
SHROOM1Q2M3G4 AC002429.1-201ENST00000437672 148 ntBASIC0.95□□□□□ -2.26
SHROOM1Q2M3G4 POLR2KP2-201ENST00000438155 177 ntBASIC0.95□□□□□ -2.26
SHROOM1Q2M3G4 SNORD124-201ENST00000459577 104 ntBASIC0.95□□□□□ -2.26
SHROOM1Q2M3G4 MIR1302-2-201ENST00000607096 138 ntBASIC0.95□□□□□ -2.26
SHROOM1Q2M3G4 AC068700.1-201ENST00000565862 3754 ntBASIC0.95□□□□□ -2.26
SHROOM1Q2M3G4 HSBP1P2-201ENST00000299671 229 ntBASIC0.94□□□□□ -2.26
SHROOM1Q2M3G4 SNORD113-8-201ENST00000363497 74 ntBASIC0.94□□□□□ -2.26
SHROOM1Q2M3G4 snoU2-30.1-201ENST00000365012 70 ntBASIC0.94□□□□□ -2.26
SHROOM1Q2M3G4 Y_RNA.368-201ENST00000365547 113 ntBASIC0.94□□□□□ -2.26
SHROOM1Q2M3G4 Y_RNA.456-201ENST00000384232 111 ntBASIC0.94□□□□□ -2.26
SHROOM1Q2M3G4 RNU6-474P-201ENST00000384243 107 ntBASIC0.94□□□□□ -2.26
SHROOM1Q2M3G4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.94□□□□□ -2.26
SHROOM1Q2M3G4 PMCHL1-202ENST00000423102 261 ntBASIC0.94□□□□□ -2.26
SHROOM1Q2M3G4 AC024067.1-201ENST00000426199 223 ntBASIC0.94□□□□□ -2.26
SHROOM1Q2M3G4 HMGN1P10-201ENST00000474557 553 ntBASIC0.94□□□□□ -2.26
SHROOM1Q2M3G4 RPS26P48-201ENST00000491713 339 ntBASIC0.94□□□□□ -2.26
SHROOM1Q2M3G4 SNORD79.1-201ENST00000516069 84 ntBASIC0.94□□□□□ -2.26
SHROOM1Q2M3G4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
SHROOM1Q2M3G4 AP001094.1-201ENST00000579805 193 ntBASIC0.94□□□□□ -2.26
SHROOM1Q2M3G4 Y_RNA.148-201ENST00000363557 117 ntBASIC0.93□□□□□ -2.26
SHROOM1Q2M3G4 Y_RNA.203-201ENST00000364106 102 ntBASIC0.93□□□□□ -2.26
SHROOM1Q2M3G4 SNORD42.2-201ENST00000365570 69 ntBASIC0.93□□□□□ -2.26
SHROOM1Q2M3G4 SNORD63-201ENST00000384262 68 ntBASIC0.93□□□□□ -2.26
SHROOM1Q2M3G4 RNU6-102P-201ENST00000384485 104 ntBASIC0.93□□□□□ -2.26
SHROOM1Q2M3G4 Y_RNA.526-201ENST00000384572 110 ntBASIC0.93□□□□□ -2.26
SHROOM1Q2M3G4 MIR520C-201ENST00000385005 87 ntBASIC0.93□□□□□ -2.26
SHROOM1Q2M3G4 MIR136-201ENST00000385207 82 ntBASIC0.93□□□□□ -2.26
SHROOM1Q2M3G4 SNORA75.2-201ENST00000391138 150 ntBASIC0.93□□□□□ -2.26
SHROOM1Q2M3G4 SNORA75.3-201ENST00000391231 150 ntBASIC0.93□□□□□ -2.26
SHROOM1Q2M3G4 AC063976.4-201ENST00000421971 163 ntBASIC0.93□□□□□ -2.26
SHROOM1Q2M3G4 RNU7-41P-201ENST00000515917 61 ntBASIC0.93□□□□□ -2.26
SHROOM1Q2M3G4 RNU7-115P-201ENST00000516433 55 ntBASIC0.93□□□□□ -2.26
SHROOM1Q2M3G4 AC104695.3-201ENST00000604052 296 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 272.1 ms