Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 Y_RNA.368-201ENST00000365547 113 ntBASIC0.7□□□□□ -2.3
SMARCB1Q12824 RNU6-1323P-201ENST00000384025 107 ntBASIC0.7□□□□□ -2.3
SMARCB1Q12824 MIR598-201ENST00000384868 97 ntBASIC0.7□□□□□ -2.3
SMARCB1Q12824 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.7□□□□□ -2.3
SMARCB1Q12824 PSMC1P5-201ENST00000512850 177 ntBASIC0.7□□□□□ -2.3
SMARCB1Q12824 RN7SKP164-201ENST00000516138 266 ntBASIC0.7□□□□□ -2.3
SMARCB1Q12824 SNORA18.7-201ENST00000516910 131 ntBASIC0.7□□□□□ -2.3
SMARCB1Q12824 AC136628.3-201ENST00000521868 290 ntBASIC0.7□□□□□ -2.3
SMARCB1Q12824 AC022616.4-201ENST00000522985 181 ntBASIC0.7□□□□□ -2.3
SMARCB1Q12824 AC024405.2-202ENST00000532731 184 ntBASIC0.7□□□□□ -2.3
SMARCB1Q12824 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.7□□□□□ -2.3
SMARCB1Q12824 AC007485.1-201ENST00000616755 206 ntBASIC0.7□□□□□ -2.3
SMARCB1Q12824 RNU6-1048P-201ENST00000364054 107 ntBASIC0.69□□□□□ -2.3
SMARCB1Q12824 Y_RNA.286-201ENST00000364813 102 ntBASIC0.69□□□□□ -2.3
SMARCB1Q12824 U8.7-201ENST00000364940 136 ntBASIC0.69□□□□□ -2.3
SMARCB1Q12824 Y_RNA.341-201ENST00000365341 102 ntBASIC0.69□□□□□ -2.3
SMARCB1Q12824 MIR605-201ENST00000385078 83 ntBASIC0.69□□□□□ -2.3
SMARCB1Q12824 Y_RNA.579-201ENST00000390939 94 ntBASIC0.69□□□□□ -2.3
SMARCB1Q12824 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.69□□□□□ -2.3
SMARCB1Q12824 RNU2-14P-201ENST00000411053 191 ntBASIC0.69□□□□□ -2.3
SMARCB1Q12824 AL160004.2-201ENST00000432935 350 ntBASIC0.69□□□□□ -2.3
SMARCB1Q12824 NDUFA4P2-201ENST00000489989 244 ntBASIC0.69□□□□□ -2.3
SMARCB1Q12824 AC117454.1-201ENST00000491120 168 ntBASIC0.69□□□□□ -2.3
SMARCB1Q12824 DEFB108E-201ENST00000524692 240 ntBASIC0.69□□□□□ -2.3
SMARCB1Q12824 MIR4801-201ENST00000582704 82 ntBASIC0.69□□□□□ -2.3
SMARCB1Q12824 AP003357.1-201ENST00000604497 148 ntBASIC0.69□□□□□ -2.3
SMARCB1Q12824 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
SMARCB1Q12824 Y_RNA.112-201ENST00000363250 102 ntBASIC0.68□□□□□ -2.3
SMARCB1Q12824 SNORD114-24-201ENST00000365029 72 ntBASIC0.68□□□□□ -2.3
SMARCB1Q12824 RNU1-115P-201ENST00000365329 160 ntBASIC0.68□□□□□ -2.3
SMARCB1Q12824 RNU6-1335P-201ENST00000365426 107 ntBASIC0.68□□□□□ -2.3
SMARCB1Q12824 Y_RNA.462-201ENST00000384268 102 ntBASIC0.68□□□□□ -2.3
SMARCB1Q12824 MIR520C-201ENST00000385005 87 ntBASIC0.68□□□□□ -2.3
SMARCB1Q12824 MIR136-201ENST00000385207 82 ntBASIC0.68□□□□□ -2.3
SMARCB1Q12824 SNORD28B-201ENST00000390993 75 ntBASIC0.68□□□□□ -2.3
SMARCB1Q12824 RNU6-1009P-201ENST00000390996 107 ntBASIC0.68□□□□□ -2.3
SMARCB1Q12824 RNU6-131P-201ENST00000391144 107 ntBASIC0.68□□□□□ -2.3
SMARCB1Q12824 MIR1278-201ENST00000408753 81 ntBASIC0.68□□□□□ -2.3
SMARCB1Q12824 MIR1302-7-201ENST00000408841 72 ntBASIC0.68□□□□□ -2.3
SMARCB1Q12824 SNRPGP14-201ENST00000435400 219 ntBASIC0.68□□□□□ -2.3
SMARCB1Q12824 MTND5P20-201ENST00000448677 143 ntBASIC0.68□□□□□ -2.3
SMARCB1Q12824 PDCD5P2-201ENST00000507570 312 ntBASIC0.68□□□□□ -2.3
SMARCB1Q12824 SNORA40.14-201ENST00000516543 86 ntBASIC0.68□□□□□ -2.3
SMARCB1Q12824 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.68□□□□□ -2.3
SMARCB1Q12824 AC004812.1-201ENST00000540773 146 ntBASIC0.68□□□□□ -2.3
SMARCB1Q12824 MIR4764-201ENST00000580680 88 ntBASIC0.68□□□□□ -2.3
SMARCB1Q12824 MIR548S-201ENST00000581352 82 ntBASIC0.68□□□□□ -2.3
SMARCB1Q12824 MIR4795-201ENST00000584182 89 ntBASIC0.68□□□□□ -2.3
SMARCB1Q12824 POLR3GP1-201ENST00000594073 261 ntBASIC0.68□□□□□ -2.3
SMARCB1Q12824 AL121655.1-201ENST00000605811 308 ntBASIC0.68□□□□□ -2.3
SMARCB1Q12824 MIR6513-201ENST00000621188 64 ntBASIC0.68□□□□□ -2.3
SMARCB1Q12824 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
SMARCB1Q12824 RNU6-1084P-201ENST00000362498 107 ntBASIC0.67□□□□□ -2.3
SMARCB1Q12824 RNU4-73P-201ENST00000363164 141 ntBASIC0.67□□□□□ -2.3
SMARCB1Q12824 Y_RNA.143-201ENST00000363520 106 ntBASIC0.67□□□□□ -2.3
SMARCB1Q12824 snoU2-30.1-201ENST00000365012 70 ntBASIC0.67□□□□□ -2.3
SMARCB1Q12824 Y_RNA.456-201ENST00000384232 111 ntBASIC0.67□□□□□ -2.3
SMARCB1Q12824 Y_RNA.551-201ENST00000384661 102 ntBASIC0.67□□□□□ -2.3
SMARCB1Q12824 RNU6-710P-201ENST00000410424 105 ntBASIC0.67□□□□□ -2.3
SMARCB1Q12824 MTND5P15-201ENST00000434246 349 ntBASIC0.67□□□□□ -2.3
SMARCB1Q12824 RNU7-90P-201ENST00000459216 62 ntBASIC0.67□□□□□ -2.3
SMARCB1Q12824 SNORD123-201ENST00000459473 70 ntBASIC0.67□□□□□ -2.3
SMARCB1Q12824 HMGN1P10-201ENST00000474557 553 ntBASIC0.67□□□□□ -2.3
SMARCB1Q12824 RNU7-115P-201ENST00000516433 55 ntBASIC0.67□□□□□ -2.3
SMARCB1Q12824 RNU6-197P-201ENST00000516680 100 ntBASIC0.67□□□□□ -2.3
SMARCB1Q12824 Y_RNA.702-201ENST00000516843 96 ntBASIC0.67□□□□□ -2.3
SMARCB1Q12824 RNU7-110P-201ENST00000516891 62 ntBASIC0.67□□□□□ -2.3
SMARCB1Q12824 AC127455.1-201ENST00000565496 145 ntBASIC0.67□□□□□ -2.3
SMARCB1Q12824 Y_RNA.772-201ENST00000606692 102 ntBASIC0.67□□□□□ -2.3
SMARCB1Q12824 AC011373.1-201ENST00000607270 237 ntBASIC0.67□□□□□ -2.3
SMARCB1Q12824 MIR103A2-201ENST00000362154 78 ntBASIC0.66□□□□□ -2.3
SMARCB1Q12824 Y_RNA.39-201ENST00000362620 98 ntBASIC0.66□□□□□ -2.3
SMARCB1Q12824 Y_RNA.203-201ENST00000364106 102 ntBASIC0.66□□□□□ -2.3
SMARCB1Q12824 Y_RNA.330-201ENST00000365230 109 ntBASIC0.66□□□□□ -2.3
SMARCB1Q12824 SNORD14.1-201ENST00000365609 90 ntBASIC0.66□□□□□ -2.3
SMARCB1Q12824 MIR608-201ENST00000384820 100 ntBASIC0.66□□□□□ -2.3
SMARCB1Q12824 MIR613-201ENST00000385248 95 ntBASIC0.66□□□□□ -2.3
SMARCB1Q12824 MIR942-201ENST00000401111 86 ntBASIC0.66□□□□□ -2.3
SMARCB1Q12824 RNU6-733P-201ENST00000410759 104 ntBASIC0.66□□□□□ -2.3
SMARCB1Q12824 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.66□□□□□ -2.3
SMARCB1Q12824 MTND3P22-201ENST00000510932 243 ntBASIC0.66□□□□□ -2.3
SMARCB1Q12824 RNU6-976P-201ENST00000516086 111 ntBASIC0.66□□□□□ -2.3
SMARCB1Q12824 AC023827.1-201ENST00000569247 97 ntBASIC0.66□□□□□ -2.3
SMARCB1Q12824 AC006157.1-201ENST00000611750 366 ntBASIC0.66□□□□□ -2.3
SMARCB1Q12824 MIR548AY-201ENST00000617669 107 ntBASIC0.66□□□□□ -2.3
SMARCB1Q12824 RNA5SP347-201ENST00000362445 119 ntBASIC0.65□□□□□ -2.31
SMARCB1Q12824 RNU4-80P-201ENST00000363200 141 ntBASIC0.65□□□□□ -2.31
SMARCB1Q12824 Y_RNA.148-201ENST00000363557 117 ntBASIC0.65□□□□□ -2.31
SMARCB1Q12824 RNU6-1209P-201ENST00000363655 107 ntBASIC0.65□□□□□ -2.31
SMARCB1Q12824 Y_RNA.197-201ENST00000364004 102 ntBASIC0.65□□□□□ -2.31
SMARCB1Q12824 RNU6-801P-201ENST00000364087 105 ntBASIC0.65□□□□□ -2.31
SMARCB1Q12824 SNORD63-201ENST00000384262 68 ntBASIC0.65□□□□□ -2.31
SMARCB1Q12824 RNU6-102P-201ENST00000384485 104 ntBASIC0.65□□□□□ -2.31
SMARCB1Q12824 MIR200A-201ENST00000384875 90 ntBASIC0.65□□□□□ -2.31
SMARCB1Q12824 AL035398.1-201ENST00000430869 322 ntBASIC0.65□□□□□ -2.31
SMARCB1Q12824 RNA5SP255-201ENST00000516370 107 ntBASIC0.65□□□□□ -2.31
SMARCB1Q12824 AC040926.1-201ENST00000530195 238 ntBASIC0.65□□□□□ -2.31
SMARCB1Q12824 AC131055.1-201ENST00000584626 316 ntBASIC0.65□□□□□ -2.31
SMARCB1Q12824 AL080274.1-201ENST00000605565 220 ntBASIC0.65□□□□□ -2.31
SMARCB1Q12824 SEPT14P17-201ENST00000617978 177 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 246.8 ms