Protein–RNA interactions for Protein: Q08043

ACTN3, Alpha-actinin-3, humanhuman

Predicted RBP Predictions only

Length 901 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN3Q08043 AC098869.1-201ENST00000481627 292 ntBASIC0.68□□□□□ -2.3
ACTN3Q08043 AC006600.1-201ENST00000572529 153 ntBASIC0.68□□□□□ -2.3
ACTN3Q08043 MIR4423-201ENST00000580922 80 ntBASIC0.68□□□□□ -2.3
ACTN3Q08043 MIR2681-201ENST00000581814 105 ntBASIC0.68□□□□□ -2.3
ACTN3Q08043 Y_RNA.772-201ENST00000606692 102 ntBASIC0.68□□□□□ -2.3
ACTN3Q08043 AL138825.1-201ENST00000618587 192 ntBASIC0.68□□□□□ -2.3
ACTN3Q08043 7SK.10-201ENST00000621414 298 ntBASIC0.68□□□□□ -2.3
ACTN3Q08043 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.68□□□□□ -2.3
ACTN3Q08043 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
ACTN3Q08043 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
ACTN3Q08043 Y_RNA.384-201ENST00000383909 102 ntBASIC0.67□□□□□ -2.3
ACTN3Q08043 MIR508-201ENST00000384857 115 ntBASIC0.67□□□□□ -2.3
ACTN3Q08043 MIR559-201ENST00000385188 96 ntBASIC0.67□□□□□ -2.3
ACTN3Q08043 SNORD99-201ENST00000408612 74 ntBASIC0.67□□□□□ -2.3
ACTN3Q08043 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.67□□□□□ -2.3
ACTN3Q08043 AC005534.2-201ENST00000431047 433 ntBASIC0.67□□□□□ -2.3
ACTN3Q08043 AL392103.1-201ENST00000447000 198 ntBASIC0.67□□□□□ -2.3
ACTN3Q08043 RNU6-830P-201ENST00000516353 107 ntBASIC0.67□□□□□ -2.3
ACTN3Q08043 AP003484.1-201ENST00000530974 250 ntBASIC0.67□□□□□ -2.3
ACTN3Q08043 AC005730.3-201ENST00000583067 366 ntBASIC0.67□□□□□ -2.3
ACTN3Q08043 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
ACTN3Q08043 Y_RNA.36-201ENST00000362602 112 ntBASIC0.66□□□□□ -2.3
ACTN3Q08043 RNU6-1040P-201ENST00000383974 107 ntBASIC0.66□□□□□ -2.3
ACTN3Q08043 RNU6-733P-201ENST00000410759 104 ntBASIC0.66□□□□□ -2.3
ACTN3Q08043 RNU6-1304P-201ENST00000411374 106 ntBASIC0.66□□□□□ -2.3
ACTN3Q08043 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.66□□□□□ -2.3
ACTN3Q08043 AC117454.1-201ENST00000491120 168 ntBASIC0.66□□□□□ -2.3
ACTN3Q08043 RNU6-966P-201ENST00000516479 104 ntBASIC0.66□□□□□ -2.3
ACTN3Q08043 MIR2115-201ENST00000516657 100 ntBASIC0.66□□□□□ -2.3
ACTN3Q08043 RNA5SP480-201ENST00000516840 109 ntBASIC0.66□□□□□ -2.3
ACTN3Q08043 RNU6-699P-201ENST00000517081 110 ntBASIC0.66□□□□□ -2.3
ACTN3Q08043 SNORD116.3-201ENST00000517176 78 ntBASIC0.66□□□□□ -2.3
ACTN3Q08043 DEFB108E-201ENST00000524692 240 ntBASIC0.66□□□□□ -2.3
ACTN3Q08043 AC068700.1-201ENST00000565862 3754 ntBASIC0.66□□□□□ -2.3
ACTN3Q08043 SNORD114-26-201ENST00000363543 72 ntBASIC0.65□□□□□ -2.31
ACTN3Q08043 Y_RNA.148-201ENST00000363557 117 ntBASIC0.65□□□□□ -2.31
ACTN3Q08043 Y_RNA.331-201ENST00000365267 102 ntBASIC0.65□□□□□ -2.31
ACTN3Q08043 RNU6-1335P-201ENST00000365426 107 ntBASIC0.65□□□□□ -2.31
ACTN3Q08043 RPL23AP54-201ENST00000495129 419 ntBASIC0.65□□□□□ -2.31
ACTN3Q08043 RNA5SP121-201ENST00000516537 101 ntBASIC0.65□□□□□ -2.31
ACTN3Q08043 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.65□□□□□ -2.31
ACTN3Q08043 AC024405.2-202ENST00000532731 184 ntBASIC0.65□□□□□ -2.31
ACTN3Q08043 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.65□□□□□ -2.31
ACTN3Q08043 MIR548AR-201ENST00000582191 57 ntBASIC0.65□□□□□ -2.31
ACTN3Q08043 MIR5188-201ENST00000583467 113 ntBASIC0.65□□□□□ -2.31
ACTN3Q08043 AC011373.1-201ENST00000607270 237 ntBASIC0.65□□□□□ -2.31
ACTN3Q08043 Pinc.1-201ENST00000616452 154 ntBASIC0.65□□□□□ -2.31
ACTN3Q08043 MIR7-2-201ENST00000384970 110 ntBASIC0.64□□□□□ -2.31
ACTN3Q08043 Y_RNA.619-201ENST00000410951 90 ntBASIC0.64□□□□□ -2.31
ACTN3Q08043 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.64□□□□□ -2.31
ACTN3Q08043 AC091951.2-201ENST00000500762 203 ntBASIC0.64□□□□□ -2.31
ACTN3Q08043 RNU7-115P-201ENST00000516433 55 ntBASIC0.64□□□□□ -2.31
ACTN3Q08043 Y_RNA.713-201ENST00000517013 96 ntBASIC0.64□□□□□ -2.31
ACTN3Q08043 AC127455.1-201ENST00000565496 145 ntBASIC0.64□□□□□ -2.31
ACTN3Q08043 RNU6-94P-201ENST00000607728 107 ntBASIC0.64□□□□□ -2.31
ACTN3Q08043 AL355073.2-201ENST00000612106 557 ntBASIC0.64□□□□□ -2.31
ACTN3Q08043 AC023934.1-201ENST00000574529 2389 ntBASIC0.64□□□□□ -2.31
ACTN3Q08043 RNU6-396P-201ENST00000365369 105 ntBASIC0.63□□□□□ -2.31
ACTN3Q08043 RNU6-708P-201ENST00000384217 107 ntBASIC0.63□□□□□ -2.31
ACTN3Q08043 RNY4P36-201ENST00000391116 96 ntBASIC0.63□□□□□ -2.31
ACTN3Q08043 RNU6-613P-201ENST00000410412 108 ntBASIC0.63□□□□□ -2.31
ACTN3Q08043 AC096644.2-201ENST00000429278 159 ntBASIC0.63□□□□□ -2.31
ACTN3Q08043 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.63□□□□□ -2.31
ACTN3Q08043 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.63□□□□□ -2.31
ACTN3Q08043 SNORA20.3-201ENST00000516880 132 ntBASIC0.63□□□□□ -2.31
ACTN3Q08043 AL355375.2-201ENST00000574825 175 ntBASIC0.63□□□□□ -2.31
ACTN3Q08043 MIR4714-201ENST00000580728 77 ntBASIC0.63□□□□□ -2.31
ACTN3Q08043 RPS29P30-201ENST00000600975 111 ntBASIC0.63□□□□□ -2.31
ACTN3Q08043 Z83818.1-201ENST00000603584 150 ntBASIC0.63□□□□□ -2.31
ACTN3Q08043 AL080274.1-201ENST00000605565 220 ntBASIC0.63□□□□□ -2.31
ACTN3Q08043 uc_338.17-201ENST00000619633 179 ntBASIC0.63□□□□□ -2.31
ACTN3Q08043 MIR6516-201ENST00000630554 81 ntBASIC0.63□□□□□ -2.31
ACTN3Q08043 MIR4272-201ENST00000635924 64 ntBASIC0.63□□□□□ -2.31
ACTN3Q08043 MIR1-1-201ENST00000362147 71 ntBASIC0.62□□□□□ -2.31
ACTN3Q08043 SNORA1.2-201ENST00000365189 134 ntBASIC0.62□□□□□ -2.31
ACTN3Q08043 Y_RNA.540-201ENST00000384638 111 ntBASIC0.62□□□□□ -2.31
ACTN3Q08043 RNU1-119P-201ENST00000391122 165 ntBASIC0.62□□□□□ -2.31
ACTN3Q08043 MIR1827-201ENST00000408549 66 ntBASIC0.62□□□□□ -2.31
ACTN3Q08043 AC018659.1-201ENST00000551083 169 ntBASIC0.62□□□□□ -2.31
ACTN3Q08043 AC104695.3-201ENST00000604052 296 ntBASIC0.62□□□□□ -2.31
ACTN3Q08043 AL121655.1-201ENST00000605811 308 ntBASIC0.62□□□□□ -2.31
ACTN3Q08043 MIR548AY-201ENST00000617669 107 ntBASIC0.62□□□□□ -2.31
ACTN3Q08043 PVT1_3.1-201ENST00000620853 95 ntBASIC0.62□□□□□ -2.31
ACTN3Q08043 MTND4LP32-201ENST00000636111 270 ntBASIC0.62□□□□□ -2.31
ACTN3Q08043 Y_RNA.142-201ENST00000363491 102 ntBASIC0.61□□□□□ -2.31
ACTN3Q08043 RNU6-1209P-201ENST00000363655 107 ntBASIC0.61□□□□□ -2.31
ACTN3Q08043 SNORA2B-201ENST00000384583 137 ntBASIC0.61□□□□□ -2.31
ACTN3Q08043 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
ACTN3Q08043 RNU6-1248P-201ENST00000391096 64 ntBASIC0.61□□□□□ -2.31
ACTN3Q08043 MIR1302-7-201ENST00000408841 72 ntBASIC0.61□□□□□ -2.31
ACTN3Q08043 AC138393.2-201ENST00000414742 246 ntBASIC0.61□□□□□ -2.31
ACTN3Q08043 MTCO2P27-201ENST00000420740 428 ntBASIC0.61□□□□□ -2.31
ACTN3Q08043 SCARNA8-201ENST00000515924 131 ntBASIC0.61□□□□□ -2.31
ACTN3Q08043 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
ACTN3Q08043 RNU7-110P-201ENST00000516891 62 ntBASIC0.61□□□□□ -2.31
ACTN3Q08043 AC004812.1-201ENST00000540773 146 ntBASIC0.61□□□□□ -2.31
ACTN3Q08043 DEFB117-201ENST00000602356 141 ntBASIC0.61□□□□□ -2.31
ACTN3Q08043 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
ACTN3Q08043 Y_RNA.39-201ENST00000362620 98 ntBASIC0.6□□□□□ -2.31
ACTN3Q08043 Y_RNA.168-201ENST00000363740 102 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 200.6 ms