Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 HMGN1P10-201ENST00000474557 553 ntBASIC1.02□□□□□ -2.25
GABPAQ06546 RPL23AP54-201ENST00000495129 419 ntBASIC1.02□□□□□ -2.25
GABPAQ06546 RNU6-397P-201ENST00000516226 104 ntBASIC1.02□□□□□ -2.25
GABPAQ06546 RNU6-1046P-201ENST00000516538 107 ntBASIC1.02□□□□□ -2.25
GABPAQ06546 RNU6-1223P-201ENST00000517124 104 ntBASIC1.02□□□□□ -2.25
GABPAQ06546 AL078603.1-201ENST00000603824 313 ntBASIC1.02□□□□□ -2.25
GABPAQ06546 Y_RNA.286-201ENST00000364813 102 ntBASIC1.01□□□□□ -2.25
GABPAQ06546 RNU6-42P-201ENST00000384165 107 ntBASIC1.01□□□□□ -2.25
GABPAQ06546 Y_RNA.509-201ENST00000384506 99 ntBASIC1.01□□□□□ -2.25
GABPAQ06546 Y_RNA.639-201ENST00000458981 102 ntBASIC1.01□□□□□ -2.25
GABPAQ06546 CYP3A137P-201ENST00000562436 69 ntBASIC1.01□□□□□ -2.25
GABPAQ06546 AP003357.1-201ENST00000604497 148 ntBASIC1.01□□□□□ -2.25
GABPAQ06546 SNORD113-5-201ENST00000607261 78 ntBASIC1.01□□□□□ -2.25
GABPAQ06546 Y_RNA.203-201ENST00000364106 102 ntBASIC1□□□□□ -2.25
GABPAQ06546 RNU6-450P-201ENST00000364654 107 ntBASIC1□□□□□ -2.25
GABPAQ06546 RNU5E-4P-201ENST00000364931 120 ntBASIC1□□□□□ -2.25
GABPAQ06546 SNORA22-201ENST00000383907 134 ntBASIC1□□□□□ -2.25
GABPAQ06546 SNORA22C-201ENST00000384614 134 ntBASIC1□□□□□ -2.25
GABPAQ06546 MIR136-201ENST00000385207 82 ntBASIC1□□□□□ -2.25
GABPAQ06546 SNORD111.1-201ENST00000516421 86 ntBASIC1□□□□□ -2.25
GABPAQ06546 RNU7-115P-201ENST00000516433 55 ntBASIC1□□□□□ -2.25
GABPAQ06546 AC136932.1-201ENST00000574771 208 ntBASIC1□□□□□ -2.25
GABPAQ06546 HSPE1P19-201ENST00000603327 295 ntBASIC1□□□□□ -2.25
GABPAQ06546 C8orf59P2-201ENST00000603441 271 ntBASIC1□□□□□ -2.25
GABPAQ06546 AL096861.1-201ENST00000610899 123 ntBASIC1□□□□□ -2.25
GABPAQ06546 AC090574.1-201ENST00000623186 233 ntBASIC1□□□□□ -2.25
GABPAQ06546 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1□□□□□ -2.25
GABPAQ06546 RNU4-80P-201ENST00000363200 141 ntBASIC0.99□□□□□ -2.25
GABPAQ06546 SNORD113-8-201ENST00000363497 74 ntBASIC0.99□□□□□ -2.25
GABPAQ06546 Y_RNA.363-201ENST00000365529 113 ntBASIC0.99□□□□□ -2.25
GABPAQ06546 AC117470.1-201ENST00000381974 330 ntBASIC0.99□□□□□ -2.25
GABPAQ06546 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
GABPAQ06546 Y_RNA.645-201ENST00000391229 102 ntBASIC0.99□□□□□ -2.25
GABPAQ06546 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.99□□□□□ -2.25
GABPAQ06546 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.99□□□□□ -2.25
GABPAQ06546 Y_RNA.602-201ENST00000410535 92 ntBASIC0.99□□□□□ -2.25
GABPAQ06546 PMCHL1-202ENST00000423102 261 ntBASIC0.99□□□□□ -2.25
GABPAQ06546 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.99□□□□□ -2.25
GABPAQ06546 SNORD116-28-201ENST00000516123 91 ntBASIC0.99□□□□□ -2.25
GABPAQ06546 SNORA18.7-201ENST00000516910 131 ntBASIC0.99□□□□□ -2.25
GABPAQ06546 AC090142.3-201ENST00000519012 385 ntBASIC0.99□□□□□ -2.25
GABPAQ06546 MIR5000-201ENST00000577717 103 ntBASIC0.99□□□□□ -2.25
GABPAQ06546 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.99□□□□□ -2.25
GABPAQ06546 MIR3192-201ENST00000584920 77 ntBASIC0.99□□□□□ -2.25
GABPAQ06546 JPX_2.1-201ENST00000614161 69 ntBASIC0.99□□□□□ -2.25
GABPAQ06546 MIR548AY-201ENST00000617669 107 ntBASIC0.99□□□□□ -2.25
GABPAQ06546 RNU6-1048P-201ENST00000364054 107 ntBASIC0.98□□□□□ -2.25
GABPAQ06546 Y_RNA.389-201ENST00000383924 113 ntBASIC0.98□□□□□ -2.25
GABPAQ06546 RNU6-474P-201ENST00000384243 107 ntBASIC0.98□□□□□ -2.25
GABPAQ06546 Y_RNA.460-201ENST00000384255 102 ntBASIC0.98□□□□□ -2.25
GABPAQ06546 SNORA80D-201ENST00000384488 135 ntBASIC0.98□□□□□ -2.25
GABPAQ06546 MIR520C-201ENST00000385005 87 ntBASIC0.98□□□□□ -2.25
GABPAQ06546 AC002429.1-201ENST00000437672 148 ntBASIC0.98□□□□□ -2.25
GABPAQ06546 HMGN2P32-201ENST00000444648 269 ntBASIC0.98□□□□□ -2.25
GABPAQ06546 SNORD79.1-201ENST00000516069 84 ntBASIC0.98□□□□□ -2.25
GABPAQ06546 RNU6-988P-201ENST00000519081 107 ntBASIC0.98□□□□□ -2.25
GABPAQ06546 AC127455.1-201ENST00000565496 145 ntBASIC0.98□□□□□ -2.25
GABPAQ06546 AC104695.3-201ENST00000604052 296 ntBASIC0.98□□□□□ -2.25
GABPAQ06546 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
GABPAQ06546 AL160413.1-201ENST00000622780 310 ntBASIC0.98□□□□□ -2.25
GABPAQ06546 Y_RNA.28-201ENST00000362554 111 ntBASIC0.97□□□□□ -2.25
GABPAQ06546 Y_RNA.148-201ENST00000363557 117 ntBASIC0.97□□□□□ -2.25
GABPAQ06546 RNU1-124P-201ENST00000363861 145 ntBASIC0.97□□□□□ -2.25
GABPAQ06546 SNORA63.7-201ENST00000365579 123 ntBASIC0.97□□□□□ -2.25
GABPAQ06546 RNU6-823P-201ENST00000391042 103 ntBASIC0.97□□□□□ -2.25
GABPAQ06546 RNU6-1248P-201ENST00000391096 64 ntBASIC0.97□□□□□ -2.25
GABPAQ06546 RNU6-101P-201ENST00000410323 104 ntBASIC0.97□□□□□ -2.25
GABPAQ06546 AC004941.2-201ENST00000427009 228 ntBASIC0.97□□□□□ -2.25
GABPAQ06546 Y_RNA.631-201ENST00000459607 101 ntBASIC0.97□□□□□ -2.25
GABPAQ06546 Y_RNA.715-201ENST00000517082 110 ntBASIC0.97□□□□□ -2.25
GABPAQ06546 SNORA74.3-201ENST00000517108 154 ntBASIC0.97□□□□□ -2.25
GABPAQ06546 RNU6-897P-201ENST00000517135 105 ntBASIC0.97□□□□□ -2.25
GABPAQ06546 AC136628.3-201ENST00000521868 290 ntBASIC0.97□□□□□ -2.25
GABPAQ06546 MIR376A1-201ENST00000616574 68 ntBASIC0.97□□□□□ -2.25
GABPAQ06546 MTND4P29-201ENST00000503122 1372 ntBASIC0.96□□□□□ -2.26
GABPAQ06546 AC134026.1-201ENST00000623249 2239 ntBASIC0.96□□□□□ -2.26
GABPAQ06546 RNU6-1209P-201ENST00000363655 107 ntBASIC0.96□□□□□ -2.26
GABPAQ06546 Y_RNA.183-201ENST00000363882 113 ntBASIC0.96□□□□□ -2.26
GABPAQ06546 SNORD14E-201ENST00000364009 85 ntBASIC0.96□□□□□ -2.26
GABPAQ06546 MIR802-201ENST00000390235 94 ntBASIC0.96□□□□□ -2.26
GABPAQ06546 SNORA36B-201ENST00000410438 131 ntBASIC0.96□□□□□ -2.26
GABPAQ06546 RNU2-14P-201ENST00000411053 191 ntBASIC0.96□□□□□ -2.26
GABPAQ06546 AC063976.4-201ENST00000421971 163 ntBASIC0.96□□□□□ -2.26
GABPAQ06546 RNU7-141P-201ENST00000459304 62 ntBASIC0.96□□□□□ -2.26
GABPAQ06546 DEFB108E-201ENST00000524692 240 ntBASIC0.96□□□□□ -2.26
GABPAQ06546 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.96□□□□□ -2.26
GABPAQ06546 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.96□□□□□ -2.26
GABPAQ06546 MIR4300-201ENST00000581016 96 ntBASIC0.96□□□□□ -2.26
GABPAQ06546 PRELID3BP2-201ENST00000605362 201 ntBASIC0.96□□□□□ -2.26
GABPAQ06546 AC108706.1-201ENST00000611053 297 ntBASIC0.96□□□□□ -2.26
GABPAQ06546 MIR6734-201ENST00000621166 68 ntBASIC0.96□□□□□ -2.26
GABPAQ06546 AC008163.1-202ENST00000636004 2889 ntBASIC0.96□□□□□ -2.26
GABPAQ06546 Y_RNA.128-201ENST00000363391 112 ntBASIC0.95□□□□□ -2.26
GABPAQ06546 RNU6-801P-201ENST00000364087 105 ntBASIC0.95□□□□□ -2.26
GABPAQ06546 SNORD12-201ENST00000391002 90 ntBASIC0.95□□□□□ -2.26
GABPAQ06546 MIR1278-201ENST00000408753 81 ntBASIC0.95□□□□□ -2.26
GABPAQ06546 AC245047.8-201ENST00000456455 284 ntBASIC0.95□□□□□ -2.26
GABPAQ06546 RNU6-351P-201ENST00000516097 100 ntBASIC0.95□□□□□ -2.26
GABPAQ06546 Y_RNA.721-201ENST00000517207 102 ntBASIC0.95□□□□□ -2.26
GABPAQ06546 AC007742.2-201ENST00000618226 398 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms