Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 Y_RNA.361-201ENST00000365515 120 ntBASIC-1.28□□□□□ -2.61
HIST1H1AQ02539 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.28□□□□□ -2.61
HIST1H1AQ02539 RNU6-517P-201ENST00000384362 110 ntBASIC-1.28□□□□□ -2.61
HIST1H1AQ02539 RNU6-83P-201ENST00000384568 112 ntBASIC-1.28□□□□□ -2.61
HIST1H1AQ02539 SNORD83B-201ENST00000386745 93 ntBASIC-1.28□□□□□ -2.61
HIST1H1AQ02539 MTATP6P18-201ENST00000417994 673 ntBASIC-1.28□□□□□ -2.61
HIST1H1AQ02539 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.28□□□□□ -2.61
HIST1H1AQ02539 AL031667.1-201ENST00000440222 725 ntBASIC-1.28□□□□□ -2.61
HIST1H1AQ02539 RNU7-67P-201ENST00000459003 62 ntBASIC-1.28□□□□□ -2.61
HIST1H1AQ02539 RNU7-180P-201ENST00000459240 63 ntBASIC-1.28□□□□□ -2.61
HIST1H1AQ02539 CCDC34P1-201ENST00000507441 517 ntBASIC-1.28□□□□□ -2.61
HIST1H1AQ02539 MIR4999-201ENST00000585029 91 ntBASIC-1.28□□□□□ -2.61
HIST1H1AQ02539 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.28□□□□□ -2.61
HIST1H1AQ02539 TUSC7.1-201ENST00000610969 165 ntBASIC-1.28□□□□□ -2.61
HIST1H1AQ02539 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.29□□□□□ -2.62
HIST1H1AQ02539 RNU6-708P-201ENST00000384217 107 ntBASIC-1.29□□□□□ -2.62
HIST1H1AQ02539 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.29□□□□□ -2.62
HIST1H1AQ02539 RNA5SP118-201ENST00000410385 109 ntBASIC-1.29□□□□□ -2.62
HIST1H1AQ02539 RNU6-602P-201ENST00000411155 105 ntBASIC-1.29□□□□□ -2.62
HIST1H1AQ02539 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.29□□□□□ -2.62
HIST1H1AQ02539 MTCO2P16-201ENST00000436962 677 ntBASIC-1.29□□□□□ -2.62
HIST1H1AQ02539 SPINT5P-201ENST00000448174 155 ntBASIC-1.29□□□□□ -2.62
HIST1H1AQ02539 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.29□□□□□ -2.62
HIST1H1AQ02539 RNU2-11P-201ENST00000459191 187 ntBASIC-1.29□□□□□ -2.62
HIST1H1AQ02539 AL133255.1-201ENST00000606374 441 ntBASIC-1.29□□□□□ -2.62
HIST1H1AQ02539 AL133215.3-201ENST00000609801 448 ntBASIC-1.29□□□□□ -2.62
HIST1H1AQ02539 AC099654.12-201ENST00000639868 649 ntBASIC-1.29□□□□□ -2.62
HIST1H1AQ02539 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.3□□□□□ -2.62
HIST1H1AQ02539 RNU5F-7P-201ENST00000363696 115 ntBASIC-1.3□□□□□ -2.62
HIST1H1AQ02539 SNORD12C-201ENST00000386307 89 ntBASIC-1.3□□□□□ -2.62
HIST1H1AQ02539 MTND2P18-201ENST00000419962 1030 ntBASIC-1.3□□□□□ -2.62
HIST1H1AQ02539 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.3□□□□□ -2.62
HIST1H1AQ02539 AL357078.3-201ENST00000607528 618 ntBASIC-1.3□□□□□ -2.62
HIST1H1AQ02539 AC005609.4-201ENST00000625071 447 ntBASIC-1.3□□□□□ -2.62
HIST1H1AQ02539 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.3□□□□□ -2.62
HIST1H1AQ02539 RNU6-47P-201ENST00000383866 107 ntBASIC-1.31□□□□□ -2.62
HIST1H1AQ02539 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.31□□□□□ -2.62
HIST1H1AQ02539 SNORA72-201ENST00000384339 132 ntBASIC-1.31□□□□□ -2.62
HIST1H1AQ02539 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.31□□□□□ -2.62
HIST1H1AQ02539 RNU6-913P-201ENST00000390913 95 ntBASIC-1.31□□□□□ -2.62
HIST1H1AQ02539 RNU2-72P-201ENST00000411175 163 ntBASIC-1.31□□□□□ -2.62
HIST1H1AQ02539 AC084290.1-201ENST00000434995 374 ntBASIC-1.31□□□□□ -2.62
HIST1H1AQ02539 RNU6-189P-201ENST00000516120 101 ntBASIC-1.31□□□□□ -2.62
HIST1H1AQ02539 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.31□□□□□ -2.62
HIST1H1AQ02539 RNU6-958P-201ENST00000516995 106 ntBASIC-1.31□□□□□ -2.62
HIST1H1AQ02539 MTND4P7-201ENST00000523876 130 ntBASIC-1.31□□□□□ -2.62
HIST1H1AQ02539 AP002963.1-201ENST00000530590 184 ntBASIC-1.31□□□□□ -2.62
HIST1H1AQ02539 AP003072.1-201ENST00000531740 145 ntBASIC-1.31□□□□□ -2.62
HIST1H1AQ02539 AC093023.1-201ENST00000547375 507 ntBASIC-1.31□□□□□ -2.62
HIST1H1AQ02539 MTND5P34-201ENST00000568888 325 ntBASIC-1.31□□□□□ -2.62
HIST1H1AQ02539 AL158211.2-201ENST00000607282 395 ntBASIC-1.31□□□□□ -2.62
HIST1H1AQ02539 AC073869.9-201ENST00000641610 120 ntBASIC-1.31□□□□□ -2.62
HIST1H1AQ02539 RNU6-214P-201ENST00000384130 107 ntBASIC-1.32□□□□□ -2.62
HIST1H1AQ02539 RNY3P9-201ENST00000384727 106 ntBASIC-1.32□□□□□ -2.62
HIST1H1AQ02539 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.32□□□□□ -2.62
HIST1H1AQ02539 RNU6-1114P-201ENST00000516022 107 ntBASIC-1.32□□□□□ -2.62
HIST1H1AQ02539 SCARNA17-201ENST00000516183 144 ntBASIC-1.32□□□□□ -2.62
HIST1H1AQ02539 AP003168.1-201ENST00000530091 307 ntBASIC-1.32□□□□□ -2.62
HIST1H1AQ02539 AC103705.1-201ENST00000619013 241 ntBASIC-1.32□□□□□ -2.62
HIST1H1AQ02539 AL391262.2-201ENST00000622466 494 ntBASIC-1.32□□□□□ -2.62
HIST1H1AQ02539 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.33□□□□□ -2.62
HIST1H1AQ02539 RNU6-456P-201ENST00000384493 107 ntBASIC-1.33□□□□□ -2.62
HIST1H1AQ02539 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.33□□□□□ -2.62
HIST1H1AQ02539 AC108059.2-201ENST00000434626 151 ntBASIC-1.33□□□□□ -2.62
HIST1H1AQ02539 AC009961.2-201ENST00000435771 251 ntBASIC-1.33□□□□□ -2.62
HIST1H1AQ02539 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.33□□□□□ -2.62
HIST1H1AQ02539 RPL39P25-201ENST00000449384 154 ntBASIC-1.33□□□□□ -2.62
HIST1H1AQ02539 AL356010.1-201ENST00000456364 102 ntBASIC-1.33□□□□□ -2.62
HIST1H1AQ02539 MTCO2P30-201ENST00000503662 364 ntBASIC-1.33□□□□□ -2.62
HIST1H1AQ02539 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.33□□□□□ -2.62
HIST1H1AQ02539 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-1.33□□□□□ -2.62
HIST1H1AQ02539 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.33□□□□□ -2.62
HIST1H1AQ02539 AC131281.1-201ENST00000522984 164 ntBASIC-1.33□□□□□ -2.62
HIST1H1AQ02539 MIR5692C1-201ENST00000585309 91 ntBASIC-1.33□□□□□ -2.62
HIST1H1AQ02539 MIR3674-201ENST00000636576 68 ntBASIC-1.33□□□□□ -2.62
HIST1H1AQ02539 AC093726.3-201ENST00000637588 150 ntBASIC-1.33□□□□□ -2.62
HIST1H1AQ02539 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.34□□□□□ -2.62
HIST1H1AQ02539 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.34□□□□□ -2.62
HIST1H1AQ02539 MIR516B1-201ENST00000385211 90 ntBASIC-1.34□□□□□ -2.62
HIST1H1AQ02539 RNU6-1000P-201ENST00000391066 106 ntBASIC-1.34□□□□□ -2.62
HIST1H1AQ02539 RNA5SP475-201ENST00000410568 110 ntBASIC-1.34□□□□□ -2.62
HIST1H1AQ02539 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.34□□□□□ -2.62
HIST1H1AQ02539 AC109347.2-201ENST00000610220 349 ntBASIC-1.34□□□□□ -2.62
HIST1H1AQ02539 MIR7844-201ENST00000616161 122 ntBASIC-1.34□□□□□ -2.62
HIST1H1AQ02539 AC009161.2-201ENST00000624626 138 ntBASIC-1.34□□□□□ -2.62
HIST1H1AQ02539 AL596211.1-201ENST00000569873 2277 ntBASIC-1.35□□□□□ -2.62
HIST1H1AQ02539 RNU6-500P-201ENST00000362349 107 ntBASIC-1.35□□□□□ -2.63
HIST1H1AQ02539 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.35□□□□□ -2.63
HIST1H1AQ02539 RNU6-490P-201ENST00000362985 107 ntBASIC-1.35□□□□□ -2.63
HIST1H1AQ02539 RNU6-926P-201ENST00000384075 107 ntBASIC-1.35□□□□□ -2.63
HIST1H1AQ02539 RNU6-30P-201ENST00000384561 107 ntBASIC-1.35□□□□□ -2.63
HIST1H1AQ02539 RNU2-9P-201ENST00000410194 145 ntBASIC-1.35□□□□□ -2.63
HIST1H1AQ02539 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.35□□□□□ -2.63
HIST1H1AQ02539 snoU13.19-201ENST00000459148 104 ntBASIC-1.35□□□□□ -2.63
HIST1H1AQ02539 AC011458.1-201ENST00000604034 617 ntBASIC-1.35□□□□□ -2.63
HIST1H1AQ02539 AC006441.5-201ENST00000612680 209 ntBASIC-1.35□□□□□ -2.63
HIST1H1AQ02539 Y_RNA.172-201ENST00000363765 102 ntBASIC-1.36□□□□□ -2.63
HIST1H1AQ02539 RNU6-82P-201ENST00000363970 107 ntBASIC-1.36□□□□□ -2.63
HIST1H1AQ02539 Y_RNA.458-201ENST00000384240 102 ntBASIC-1.36□□□□□ -2.63
HIST1H1AQ02539 BX276092.1-201ENST00000427368 251 ntBASIC-1.36□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms