Protein–RNA interactions for Protein: Q01831

XPC, DNA repair protein complementing XP-C cells, humanhuman

Predicted RBP Predictions only

Length 940 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPCQ01831 OR9P1P-201ENST00000496431 281 ntBASIC2.93□□□□□ -1.94
XPCQ01831 RNU6-197P-201ENST00000516680 100 ntBASIC2.93□□□□□ -1.94
XPCQ01831 Y_RNA.783-201ENST00000613546 102 ntBASIC2.93□□□□□ -1.94
XPCQ01831 Pinc.1-201ENST00000616452 154 ntBASIC2.93□□□□□ -1.94
XPCQ01831 MIR3658-201ENST00000636291 56 ntBASIC2.93□□□□□ -1.94
XPCQ01831 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
XPCQ01831 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
XPCQ01831 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
XPCQ01831 MLLT10P1-201ENST00000418346 262 ntBASIC2.92□□□□□ -1.94
XPCQ01831 AC011753.1-201ENST00000451001 220 ntBASIC2.92□□□□□ -1.94
XPCQ01831 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.92□□□□□ -1.94
XPCQ01831 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
XPCQ01831 RNU6-1138P-201ENST00000365359 106 ntBASIC2.91□□□□□ -1.94
XPCQ01831 SNORA48.1-201ENST00000390879 135 ntBASIC2.91□□□□□ -1.94
XPCQ01831 SNORA40.18-201ENST00000391200 128 ntBASIC2.91□□□□□ -1.94
XPCQ01831 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
XPCQ01831 AC069257.2-201ENST00000441819 155 ntBASIC2.91□□□□□ -1.94
XPCQ01831 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.91□□□□□ -1.94
XPCQ01831 RNU6-789P-201ENST00000517105 102 ntBASIC2.91□□□□□ -1.94
XPCQ01831 AL160236.1-201ENST00000556317 195 ntBASIC2.91□□□□□ -1.94
XPCQ01831 MIR378D2-201ENST00000580636 98 ntBASIC2.91□□□□□ -1.94
XPCQ01831 MIR3910-1-201ENST00000580936 111 ntBASIC2.91□□□□□ -1.94
XPCQ01831 MIR203B-201ENST00000636080 86 ntBASIC2.91□□□□□ -1.94
XPCQ01831 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.91□□□□□ -1.94
XPCQ01831 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
XPCQ01831 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
XPCQ01831 Z82195.2-201ENST00000612348 18351 ntBASIC2.91□□□□□ -1.94
XPCQ01831 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
XPCQ01831 ZNF702P-202ENST00000434269 1966 ntBASIC2.91□□□□□ -1.94
XPCQ01831 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
XPCQ01831 Y_RNA.215-201ENST00000364204 112 ntBASIC2.9□□□□□ -1.95
XPCQ01831 Y_RNA.521-201ENST00000384560 114 ntBASIC2.9□□□□□ -1.95
XPCQ01831 MIR522-201ENST00000385071 87 ntBASIC2.9□□□□□ -1.95
XPCQ01831 MIR613-201ENST00000385248 95 ntBASIC2.9□□□□□ -1.95
XPCQ01831 RNA5SP501-201ENST00000410990 112 ntBASIC2.9□□□□□ -1.95
XPCQ01831 RPL23AP63-201ENST00000498752 471 ntBASIC2.9□□□□□ -1.95
XPCQ01831 RNA5SP200-201ENST00000516360 103 ntBASIC2.9□□□□□ -1.95
XPCQ01831 RNU6-406P-201ENST00000516470 107 ntBASIC2.9□□□□□ -1.95
XPCQ01831 RNA5SP153-201ENST00000516498 76 ntBASIC2.9□□□□□ -1.95
XPCQ01831 SNORA31.25-201ENST00000517242 134 ntBASIC2.9□□□□□ -1.95
XPCQ01831 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.9□□□□□ -1.95
XPCQ01831 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.9□□□□□ -1.95
XPCQ01831 AC009831.4-201ENST00000620744 325 ntBASIC2.9□□□□□ -1.95
XPCQ01831 MIR8054-201ENST00000620877 86 ntBASIC2.9□□□□□ -1.95
XPCQ01831 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
XPCQ01831 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
XPCQ01831 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
XPCQ01831 SNORD68-201ENST00000363214 84 ntBASIC2.89□□□□□ -1.95
XPCQ01831 Y_RNA.265-201ENST00000364677 108 ntBASIC2.89□□□□□ -1.95
XPCQ01831 Y_RNA.488-201ENST00000384403 102 ntBASIC2.89□□□□□ -1.95
XPCQ01831 RNU6-768P-201ENST00000384683 107 ntBASIC2.89□□□□□ -1.95
XPCQ01831 MIR583-201ENST00000384846 75 ntBASIC2.89□□□□□ -1.95
XPCQ01831 RNU6-440P-201ENST00000390882 105 ntBASIC2.89□□□□□ -1.95
XPCQ01831 RNU6-131P-201ENST00000391144 107 ntBASIC2.89□□□□□ -1.95
XPCQ01831 RNU2-70P-201ENST00000410718 179 ntBASIC2.89□□□□□ -1.95
XPCQ01831 FTH1P12-201ENST00000432137 551 ntBASIC2.89□□□□□ -1.95
XPCQ01831 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.89□□□□□ -1.95
XPCQ01831 RNU7-193P-201ENST00000516723 65 ntBASIC2.89□□□□□ -1.95
XPCQ01831 Y_RNA.714-201ENST00000517065 90 ntBASIC2.89□□□□□ -1.95
XPCQ01831 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.89□□□□□ -1.95
XPCQ01831 MIR4662B-201ENST00000579498 81 ntBASIC2.89□□□□□ -1.95
XPCQ01831 MIR6132-201ENST00000622083 109 ntBASIC2.89□□□□□ -1.95
XPCQ01831 AC092881.1-201ENST00000638218 2733 ntBASIC2.88□□□□□ -1.95
XPCQ01831 Y_RNA.91-201ENST00000363042 107 ntBASIC2.88□□□□□ -1.95
XPCQ01831 Y_RNA.634-201ENST00000364811 113 ntBASIC2.88□□□□□ -1.95
XPCQ01831 RNU4-11P-201ENST00000365287 132 ntBASIC2.88□□□□□ -1.95
XPCQ01831 SNORD50.2-201ENST00000365465 70 ntBASIC2.88□□□□□ -1.95
XPCQ01831 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.88□□□□□ -1.95
XPCQ01831 MRPS17P9-201ENST00000511924 393 ntBASIC2.88□□□□□ -1.95
XPCQ01831 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
XPCQ01831 SUB1P4-201ENST00000566062 339 ntBASIC2.88□□□□□ -1.95
XPCQ01831 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.88□□□□□ -1.95
XPCQ01831 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
XPCQ01831 Y_RNA.118-201ENST00000363300 101 ntBASIC2.87□□□□□ -1.95
XPCQ01831 RNU6-704P-201ENST00000364162 103 ntBASIC2.87□□□□□ -1.95
XPCQ01831 SNORA63D-201ENST00000364359 132 ntBASIC2.87□□□□□ -1.95
XPCQ01831 Y_RNA.393-201ENST00000383936 102 ntBASIC2.87□□□□□ -1.95
XPCQ01831 Y_RNA.486-201ENST00000384398 107 ntBASIC2.87□□□□□ -1.95
XPCQ01831 RNA5SP482-201ENST00000391269 118 ntBASIC2.87□□□□□ -1.95
XPCQ01831 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.87□□□□□ -1.95
XPCQ01831 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.87□□□□□ -1.95
XPCQ01831 RNU6-126P-201ENST00000516685 103 ntBASIC2.87□□□□□ -1.95
XPCQ01831 RNU7-28P-201ENST00000516759 62 ntBASIC2.87□□□□□ -1.95
XPCQ01831 AC008507.4-201ENST00000585464 127 ntBASIC2.87□□□□□ -1.95
XPCQ01831 AC097639.2-201ENST00000603159 172 ntBASIC2.87□□□□□ -1.95
XPCQ01831 AC005336.3-201ENST00000623833 2679 ntBASIC2.87□□□□□ -1.95
XPCQ01831 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
XPCQ01831 Y_RNA.343-201ENST00000365354 112 ntBASIC2.86□□□□□ -1.95
XPCQ01831 SNORD72-201ENST00000390994 80 ntBASIC2.86□□□□□ -1.95
XPCQ01831 SNORA26-201ENST00000391286 122 ntBASIC2.86□□□□□ -1.95
XPCQ01831 RNA5SP450-201ENST00000411206 102 ntBASIC2.86□□□□□ -1.95
XPCQ01831 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.86□□□□□ -1.95
XPCQ01831 SNORA31.10-201ENST00000516482 106 ntBASIC2.86□□□□□ -1.95
XPCQ01831 MIR3646-201ENST00000578301 84 ntBASIC2.86□□□□□ -1.95
XPCQ01831 MIR548X2-201ENST00000579776 100 ntBASIC2.86□□□□□ -1.95
XPCQ01831 MIR4762-201ENST00000585261 75 ntBASIC2.86□□□□□ -1.95
XPCQ01831 AC087685.1-201ENST00000587507 141 ntBASIC2.86□□□□□ -1.95
XPCQ01831 SNRPGP19-201ENST00000603826 189 ntBASIC2.86□□□□□ -1.95
XPCQ01831 MIR6844-201ENST00000637122 62 ntBASIC2.86□□□□□ -1.95
XPCQ01831 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms