Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
CBX1P83916 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.45□□□□□ -2.34
CBX1P83916 RNU6-1223P-201ENST00000517124 104 ntBASIC0.45□□□□□ -2.34
CBX1P83916 AP003357.1-201ENST00000604497 148 ntBASIC0.45□□□□□ -2.34
CBX1P83916 Pinc.1-201ENST00000616452 154 ntBASIC0.45□□□□□ -2.34
CBX1P83916 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
CBX1P83916 Y_RNA.570-201ENST00000384750 101 ntBASIC0.44□□□□□ -2.34
CBX1P83916 MIR570-201ENST00000384917 97 ntBASIC0.44□□□□□ -2.34
CBX1P83916 AC099799.1-201ENST00000439809 192 ntBASIC0.44□□□□□ -2.34
CBX1P83916 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.44□□□□□ -2.34
CBX1P83916 FGF7P6-202ENST00000451282 293 ntBASIC0.44□□□□□ -2.34
CBX1P83916 Y_RNA.653-201ENST00000459091 95 ntBASIC0.44□□□□□ -2.34
CBX1P83916 RPL23AP54-201ENST00000495129 419 ntBASIC0.44□□□□□ -2.34
CBX1P83916 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.44□□□□□ -2.34
CBX1P83916 RNU6-830P-201ENST00000516353 107 ntBASIC0.44□□□□□ -2.34
CBX1P83916 AC024405.2-202ENST00000532731 184 ntBASIC0.44□□□□□ -2.34
CBX1P83916 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.44□□□□□ -2.34
CBX1P83916 AC133104.2-201ENST00000615272 193 ntBASIC0.44□□□□□ -2.34
CBX1P83916 AC138305.3-201ENST00000624988 240 ntBASIC0.44□□□□□ -2.34
CBX1P83916 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
CBX1P83916 RNU6-708P-201ENST00000384217 107 ntBASIC0.43□□□□□ -2.34
CBX1P83916 SNORA51.10-201ENST00000384418 136 ntBASIC0.43□□□□□ -2.34
CBX1P83916 U8.17-201ENST00000391292 132 ntBASIC0.43□□□□□ -2.34
CBX1P83916 AC024067.1-201ENST00000426199 223 ntBASIC0.43□□□□□ -2.34
CBX1P83916 MTCO3P10-201ENST00000455912 772 ntBASIC0.43□□□□□ -2.34
CBX1P83916 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.43□□□□□ -2.34
CBX1P83916 AC005730.3-201ENST00000583067 366 ntBASIC0.43□□□□□ -2.34
CBX1P83916 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
CBX1P83916 Y_RNA.122-201ENST00000363331 96 ntBASIC0.42□□□□□ -2.34
CBX1P83916 Y_RNA.238-201ENST00000364441 102 ntBASIC0.42□□□□□ -2.34
CBX1P83916 SNORD81.2-201ENST00000365153 76 ntBASIC0.42□□□□□ -2.34
CBX1P83916 AL590004.1-201ENST00000405321 300 ntBASIC0.42□□□□□ -2.34
CBX1P83916 RN7SKP12-201ENST00000516275 143 ntBASIC0.42□□□□□ -2.34
CBX1P83916 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.42□□□□□ -2.34
CBX1P83916 AC127455.1-201ENST00000565496 145 ntBASIC0.42□□□□□ -2.34
CBX1P83916 MIR5188-201ENST00000583467 113 ntBASIC0.42□□□□□ -2.34
CBX1P83916 RNU6-490P-201ENST00000362985 107 ntBASIC0.41□□□□□ -2.34
CBX1P83916 RNU6-1209P-201ENST00000363655 107 ntBASIC0.41□□□□□ -2.34
CBX1P83916 Y_RNA.376-201ENST00000365638 108 ntBASIC0.41□□□□□ -2.34
CBX1P83916 Y_RNA.537-201ENST00000384626 109 ntBASIC0.41□□□□□ -2.34
CBX1P83916 AC096644.2-201ENST00000429278 159 ntBASIC0.41□□□□□ -2.34
CBX1P83916 SNRPGP14-201ENST00000435400 219 ntBASIC0.41□□□□□ -2.34
CBX1P83916 HMGN1P10-201ENST00000474557 553 ntBASIC0.41□□□□□ -2.34
CBX1P83916 NDUFA4P2-201ENST00000489989 244 ntBASIC0.41□□□□□ -2.34
CBX1P83916 AC091951.2-201ENST00000500762 203 ntBASIC0.41□□□□□ -2.34
CBX1P83916 RNU6-559P-201ENST00000516151 98 ntBASIC0.41□□□□□ -2.34
CBX1P83916 RNU7-115P-201ENST00000516433 55 ntBASIC0.41□□□□□ -2.34
CBX1P83916 AC022306.2-201ENST00000617563 647 ntBASIC0.41□□□□□ -2.34
CBX1P83916 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.41□□□□□ -2.34
CBX1P83916 RNU6-268P-201ENST00000364174 107 ntBASIC0.4□□□□□ -2.35
CBX1P83916 Y_RNA.796-201ENST00000364268 102 ntBASIC0.4□□□□□ -2.35
CBX1P83916 Y_RNA.799-201ENST00000364992 102 ntBASIC0.4□□□□□ -2.35
CBX1P83916 Y_RNA.331-201ENST00000365267 102 ntBASIC0.4□□□□□ -2.35
CBX1P83916 RNY1P8-201ENST00000383970 114 ntBASIC0.4□□□□□ -2.35
CBX1P83916 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
CBX1P83916 MIR140-201ENST00000385282 100 ntBASIC0.4□□□□□ -2.35
CBX1P83916 RNU6-876P-201ENST00000391295 104 ntBASIC0.4□□□□□ -2.35
CBX1P83916 MTCO2P33-201ENST00000402100 465 ntBASIC0.4□□□□□ -2.35
CBX1P83916 RNU6-177P-201ENST00000411257 104 ntBASIC0.4□□□□□ -2.35
CBX1P83916 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.4□□□□□ -2.35
CBX1P83916 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.4□□□□□ -2.35
CBX1P83916 RNU4-57P-201ENST00000515980 135 ntBASIC0.4□□□□□ -2.35
CBX1P83916 MIR548AO-201ENST00000579992 96 ntBASIC0.4□□□□□ -2.35
CBX1P83916 MIR4423-201ENST00000580922 80 ntBASIC0.4□□□□□ -2.35
CBX1P83916 VN1R91P-201ENST00000594377 169 ntBASIC0.4□□□□□ -2.35
CBX1P83916 DEFB117-201ENST00000602356 141 ntBASIC0.4□□□□□ -2.35
CBX1P83916 AC113139.1-201ENST00000605049 239 ntBASIC0.4□□□□□ -2.35
CBX1P83916 AC025253.1-201ENST00000613623 543 ntBASIC0.4□□□□□ -2.35
CBX1P83916 MIR548AY-201ENST00000617669 107 ntBASIC0.4□□□□□ -2.35
CBX1P83916 AC243829.3-201ENST00000622177 108 ntBASIC0.4□□□□□ -2.35
CBX1P83916 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
CBX1P83916 MIR377-201ENST00000362145 69 ntBASIC0.39□□□□□ -2.35
CBX1P83916 RNA5SP499-201ENST00000363982 119 ntBASIC0.39□□□□□ -2.35
CBX1P83916 U8.7-201ENST00000364940 136 ntBASIC0.39□□□□□ -2.35
CBX1P83916 SNORA1.2-201ENST00000365189 134 ntBASIC0.39□□□□□ -2.35
CBX1P83916 MIR573-201ENST00000384964 99 ntBASIC0.39□□□□□ -2.35
CBX1P83916 MIR559-201ENST00000385188 96 ntBASIC0.39□□□□□ -2.35
CBX1P83916 MT-TL1-201ENST00000386347 75 ntBASIC0.39□□□□□ -2.35
CBX1P83916 MT-TN-201ENST00000387400 73 ntBASIC0.39□□□□□ -2.35
CBX1P83916 AF228730.4-201ENST00000421457 183 ntBASIC0.39□□□□□ -2.35
CBX1P83916 RNU7-181P-201ENST00000517234 74 ntBASIC0.39□□□□□ -2.35
CBX1P83916 AC006600.1-201ENST00000572529 153 ntBASIC0.39□□□□□ -2.35
CBX1P83916 MIR2681-201ENST00000581814 105 ntBASIC0.39□□□□□ -2.35
CBX1P83916 AC008507.4-201ENST00000585464 127 ntBASIC0.39□□□□□ -2.35
CBX1P83916 RMST_2.1-201ENST00000617263 136 ntBASIC0.39□□□□□ -2.35
CBX1P83916 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.39□□□□□ -2.35
CBX1P83916 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
CBX1P83916 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.39□□□□□ -2.35
CBX1P83916 Y_RNA.226-201ENST00000364337 114 ntBASIC0.38□□□□□ -2.35
CBX1P83916 Y_RNA.474-201ENST00000384341 102 ntBASIC0.38□□□□□ -2.35
CBX1P83916 AC098934.3-201ENST00000430450 190 ntBASIC0.38□□□□□ -2.35
CBX1P83916 SCARNA8-201ENST00000515924 131 ntBASIC0.38□□□□□ -2.35
CBX1P83916 AP000753.3-201ENST00000604083 169 ntBASIC0.38□□□□□ -2.35
CBX1P83916 MIR4791-201ENST00000607666 84 ntBASIC0.38□□□□□ -2.35
CBX1P83916 AC015726.2-201ENST00000620112 122 ntBASIC0.38□□□□□ -2.35
CBX1P83916 MTND1P7-201ENST00000632801 297 ntBASIC0.38□□□□□ -2.35
CBX1P83916 RNU6-369P-201ENST00000362515 102 ntBASIC0.37□□□□□ -2.35
CBX1P83916 Y_RNA.269-201ENST00000364685 89 ntBASIC0.37□□□□□ -2.35
CBX1P83916 Y_RNA.462-201ENST00000384268 102 ntBASIC0.37□□□□□ -2.35
CBX1P83916 RNU6-1132P-201ENST00000459214 107 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 214.9 ms