Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 DNAJC19P9-201ENST00000555084 351 ntBASIC1.32□□□□□ -2.2
PRAMEP78395 AC037487.3-201ENST00000606668 112 ntBASIC1.32□□□□□ -2.2
PRAMEP78395 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.32□□□□□ -2.2
PRAMEP78395 Y_RNA.84-201ENST00000363011 104 ntBASIC1.31□□□□□ -2.2
PRAMEP78395 RNU6-899P-201ENST00000363947 107 ntBASIC1.31□□□□□ -2.2
PRAMEP78395 SNORD14E-201ENST00000364009 85 ntBASIC1.31□□□□□ -2.2
PRAMEP78395 RNU6-326P-201ENST00000365480 107 ntBASIC1.31□□□□□ -2.2
PRAMEP78395 AL731563.1-201ENST00000442202 214 ntBASIC1.31□□□□□ -2.2
PRAMEP78395 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.31□□□□□ -2.2
PRAMEP78395 Y_RNA.637-201ENST00000459424 114 ntBASIC1.31□□□□□ -2.2
PRAMEP78395 MTATP8P1-201ENST00000467115 207 ntBASIC1.31□□□□□ -2.2
PRAMEP78395 AC091959.1-201ENST00000495857 238 ntBASIC1.31□□□□□ -2.2
PRAMEP78395 SNORA31.2-201ENST00000516019 134 ntBASIC1.31□□□□□ -2.2
PRAMEP78395 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.31□□□□□ -2.2
PRAMEP78395 RNU6-1205P-201ENST00000363625 106 ntBASIC1.3□□□□□ -2.2
PRAMEP78395 Y_RNA.512-201ENST00000384518 102 ntBASIC1.3□□□□□ -2.2
PRAMEP78395 MIR136-201ENST00000385207 82 ntBASIC1.3□□□□□ -2.2
PRAMEP78395 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.3□□□□□ -2.2
PRAMEP78395 AC015922.2-201ENST00000435593 184 ntBASIC1.3□□□□□ -2.2
PRAMEP78395 RPL39P39-201ENST00000455840 151 ntBASIC1.3□□□□□ -2.2
PRAMEP78395 NDUFA4P2-201ENST00000489989 244 ntBASIC1.3□□□□□ -2.2
PRAMEP78395 RNA5SP458-201ENST00000516188 119 ntBASIC1.3□□□□□ -2.2
PRAMEP78395 MIR2681-201ENST00000581814 105 ntBASIC1.3□□□□□ -2.2
PRAMEP78395 AL357312.1-201ENST00000603879 298 ntBASIC1.3□□□□□ -2.2
PRAMEP78395 RNU6-238P-201ENST00000363313 106 ntBASIC1.29□□□□□ -2.2
PRAMEP78395 RNU6-674P-201ENST00000363831 107 ntBASIC1.29□□□□□ -2.2
PRAMEP78395 Y_RNA.326-201ENST00000365176 113 ntBASIC1.29□□□□□ -2.2
PRAMEP78395 Y_RNA.422-201ENST00000384054 114 ntBASIC1.29□□□□□ -2.2
PRAMEP78395 MIR802-201ENST00000390235 94 ntBASIC1.29□□□□□ -2.2
PRAMEP78395 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.29□□□□□ -2.2
PRAMEP78395 RNU4-62P-201ENST00000410125 130 ntBASIC1.29□□□□□ -2.2
PRAMEP78395 RNU6-383P-201ENST00000410864 94 ntBASIC1.29□□□□□ -2.2
PRAMEP78395 BTF3P11-201ENST00000426582 477 ntBASIC1.29□□□□□ -2.2
PRAMEP78395 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.29□□□□□ -2.2
PRAMEP78395 SNORA18.7-201ENST00000516910 131 ntBASIC1.29□□□□□ -2.2
PRAMEP78395 MIR4421-201ENST00000578133 69 ntBASIC1.29□□□□□ -2.2
PRAMEP78395 AL096861.1-201ENST00000610899 123 ntBASIC1.29□□□□□ -2.2
PRAMEP78395 RNU6-694P-201ENST00000364071 147 ntBASIC1.28□□□□□ -2.2
PRAMEP78395 SNORA25.8-201ENST00000364831 128 ntBASIC1.28□□□□□ -2.2
PRAMEP78395 RNU6-969P-201ENST00000383900 105 ntBASIC1.28□□□□□ -2.2
PRAMEP78395 RNU6-939P-201ENST00000384634 107 ntBASIC1.28□□□□□ -2.2
PRAMEP78395 RNU6-1109P-201ENST00000391187 107 ntBASIC1.28□□□□□ -2.2
PRAMEP78395 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.28□□□□□ -2.2
PRAMEP78395 HMGN2P32-201ENST00000444648 269 ntBASIC1.28□□□□□ -2.2
PRAMEP78395 AC009474.2-201ENST00000451383 136 ntBASIC1.28□□□□□ -2.2
PRAMEP78395 SNORD111.1-201ENST00000516421 86 ntBASIC1.28□□□□□ -2.2
PRAMEP78395 RNU6-635P-201ENST00000516651 102 ntBASIC1.28□□□□□ -2.2
PRAMEP78395 DEFB108E-201ENST00000524692 240 ntBASIC1.28□□□□□ -2.2
PRAMEP78395 AC068338.1-201ENST00000565567 176 ntBASIC1.28□□□□□ -2.2
PRAMEP78395 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.28□□□□□ -2.2
PRAMEP78395 AC006504.6-201ENST00000590142 199 ntBASIC1.28□□□□□ -2.2
PRAMEP78395 AC013791.1-201ENST00000616619 62 ntBASIC1.28□□□□□ -2.2
PRAMEP78395 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.28□□□□□ -2.2
PRAMEP78395 AC068700.1-201ENST00000565862 3754 ntBASIC1.27□□□□□ -2.21
PRAMEP78395 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
PRAMEP78395 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
PRAMEP78395 RNU6-1272P-201ENST00000362776 107 ntBASIC1.27□□□□□ -2.21
PRAMEP78395 SNORA63-201ENST00000363450 132 ntBASIC1.27□□□□□ -2.21
PRAMEP78395 MIR222-201ENST00000384992 110 ntBASIC1.27□□□□□ -2.21
PRAMEP78395 RNU6-910P-201ENST00000390844 107 ntBASIC1.27□□□□□ -2.21
PRAMEP78395 RNU6-1203P-201ENST00000410703 110 ntBASIC1.27□□□□□ -2.21
PRAMEP78395 MTND4LP30-201ENST00000454092 297 ntBASIC1.27□□□□□ -2.21
PRAMEP78395 AC004223.1-201ENST00000479840 271 ntBASIC1.27□□□□□ -2.21
PRAMEP78395 RNU6-1338P-201ENST00000516328 91 ntBASIC1.27□□□□□ -2.21
PRAMEP78395 SNORA27.4-201ENST00000516650 95 ntBASIC1.27□□□□□ -2.21
PRAMEP78395 SNORA70.22-201ENST00000517160 124 ntBASIC1.27□□□□□ -2.21
PRAMEP78395 AL022345.2-201ENST00000606307 135 ntBASIC1.27□□□□□ -2.21
PRAMEP78395 AC007742.2-201ENST00000618226 398 ntBASIC1.27□□□□□ -2.21
PRAMEP78395 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.27□□□□□ -2.21
PRAMEP78395 Y_RNA.293-201ENST00000364908 93 ntBASIC1.26□□□□□ -2.21
PRAMEP78395 SNORA25-201ENST00000384384 134 ntBASIC1.26□□□□□ -2.21
PRAMEP78395 MIR618-201ENST00000385287 98 ntBASIC1.26□□□□□ -2.21
PRAMEP78395 SNORD72-201ENST00000390994 80 ntBASIC1.26□□□□□ -2.21
PRAMEP78395 SNORA40.6-201ENST00000391153 128 ntBASIC1.26□□□□□ -2.21
PRAMEP78395 RNU6-1054P-201ENST00000411293 104 ntBASIC1.26□□□□□ -2.21
PRAMEP78395 AC108667.1-201ENST00000428618 249 ntBASIC1.26□□□□□ -2.21
PRAMEP78395 AC245047.7-201ENST00000440265 293 ntBASIC1.26□□□□□ -2.21
PRAMEP78395 RPS29P29-201ENST00000456396 171 ntBASIC1.26□□□□□ -2.21
PRAMEP78395 RNU7-95P-201ENST00000459222 64 ntBASIC1.26□□□□□ -2.21
PRAMEP78395 Y_RNA.720-201ENST00000517166 92 ntBASIC1.26□□□□□ -2.21
PRAMEP78395 MIR5692C2-201ENST00000577959 77 ntBASIC1.26□□□□□ -2.21
PRAMEP78395 MIR3192-201ENST00000584920 77 ntBASIC1.26□□□□□ -2.21
PRAMEP78395 BX284668.6-201ENST00000606899 438 ntBASIC1.26□□□□□ -2.21
PRAMEP78395 snoU18.1-201ENST00000629629 71 ntBASIC1.26□□□□□ -2.21
PRAMEP78395 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.26□□□□□ -2.21
PRAMEP78395 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
PRAMEP78395 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
PRAMEP78395 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
PRAMEP78395 SNORA7.1-201ENST00000363750 139 ntBASIC1.25□□□□□ -2.21
PRAMEP78395 RNU6-144P-201ENST00000383951 107 ntBASIC1.25□□□□□ -2.21
PRAMEP78395 RNU6-442P-201ENST00000383968 104 ntBASIC1.25□□□□□ -2.21
PRAMEP78395 RNU6-713P-201ENST00000384761 107 ntBASIC1.25□□□□□ -2.21
PRAMEP78395 MIR520C-201ENST00000385005 87 ntBASIC1.25□□□□□ -2.21
PRAMEP78395 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.25□□□□□ -2.21
PRAMEP78395 AL603825.1-201ENST00000438481 80 ntBASIC1.25□□□□□ -2.21
PRAMEP78395 SERF1AP1-201ENST00000514575 187 ntBASIC1.25□□□□□ -2.21
PRAMEP78395 SNORA31.4-201ENST00000516049 129 ntBASIC1.25□□□□□ -2.21
PRAMEP78395 RNU7-40P-201ENST00000516397 64 ntBASIC1.25□□□□□ -2.21
PRAMEP78395 SNORA74.3-201ENST00000517108 154 ntBASIC1.25□□□□□ -2.21
PRAMEP78395 MIR3660-201ENST00000584845 100 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms