Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 SNORA32.3-201ENST00000384772 121 ntBASIC-0.71□□□□□ -2.52
HIST1H3AP68431 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.71□□□□□ -2.52
HIST1H3AP68431 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.71□□□□□ -2.52
HIST1H3AP68431 AC026782.1-201ENST00000512952 449 ntBASIC-0.71□□□□□ -2.52
HIST1H3AP68431 SNORA40.9-201ENST00000515895 93 ntBASIC-0.71□□□□□ -2.52
HIST1H3AP68431 MTND1P24-201ENST00000552175 861 ntBASIC-0.71□□□□□ -2.52
HIST1H3AP68431 FTX_2.1-201ENST00000618816 94 ntBASIC-0.71□□□□□ -2.52
HIST1H3AP68431 AC097520.1-201ENST00000624435 385 ntBASIC-0.71□□□□□ -2.52
HIST1H3AP68431 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.71□□□□□ -2.52
HIST1H3AP68431 RNU6-923P-201ENST00000364753 107 ntBASIC-0.72□□□□□ -2.52
HIST1H3AP68431 SNORD49B-201ENST00000365172 72 ntBASIC-0.72□□□□□ -2.52
HIST1H3AP68431 RNU6-1103P-201ENST00000384150 107 ntBASIC-0.72□□□□□ -2.52
HIST1H3AP68431 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.72□□□□□ -2.52
HIST1H3AP68431 MIR501-201ENST00000390204 84 ntBASIC-0.72□□□□□ -2.52
HIST1H3AP68431 RNU6-284P-201ENST00000411105 106 ntBASIC-0.72□□□□□ -2.52
HIST1H3AP68431 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.72□□□□□ -2.52
HIST1H3AP68431 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.72□□□□□ -2.52
HIST1H3AP68431 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.72□□□□□ -2.52
HIST1H3AP68431 AC114755.3-201ENST00000481111 251 ntBASIC-0.72□□□□□ -2.52
HIST1H3AP68431 RNA5SP47-201ENST00000517230 109 ntBASIC-0.72□□□□□ -2.52
HIST1H3AP68431 RNU2-60P-201ENST00000517290 128 ntBASIC-0.72□□□□□ -2.52
HIST1H3AP68431 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-0.72□□□□□ -2.52
HIST1H3AP68431 MIR8064-201ENST00000612863 90 ntBASIC-0.72□□□□□ -2.52
HIST1H3AP68431 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.72□□□□□ -2.52
HIST1H3AP68431 JPX_2.1-201ENST00000614161 69 ntBASIC-0.72□□□□□ -2.52
HIST1H3AP68431 MIR6514-201ENST00000622549 70 ntBASIC-0.72□□□□□ -2.52
HIST1H3AP68431 AP000720.1-201ENST00000625091 483 ntBASIC-0.72□□□□□ -2.52
HIST1H3AP68431 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.73□□□□□ -2.53
HIST1H3AP68431 SNORA69-201ENST00000383895 132 ntBASIC-0.73□□□□□ -2.53
HIST1H3AP68431 SNORA26.8-201ENST00000391306 124 ntBASIC-0.73□□□□□ -2.53
HIST1H3AP68431 AL031003.1-201ENST00000404229 172 ntBASIC-0.73□□□□□ -2.53
HIST1H3AP68431 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-0.73□□□□□ -2.53
HIST1H3AP68431 MTND2P39-201ENST00000457230 764 ntBASIC-0.73□□□□□ -2.53
HIST1H3AP68431 RNU7-67P-201ENST00000459003 62 ntBASIC-0.73□□□□□ -2.53
HIST1H3AP68431 AC107297.1-201ENST00000459991 176 ntBASIC-0.73□□□□□ -2.53
HIST1H3AP68431 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.73□□□□□ -2.53
HIST1H3AP68431 RNU6-135P-201ENST00000516769 101 ntBASIC-0.73□□□□□ -2.53
HIST1H3AP68431 uc_338.36-201ENST00000622331 158 ntBASIC-0.73□□□□□ -2.53
HIST1H3AP68431 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.74□□□□□ -2.53
HIST1H3AP68431 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.74□□□□□ -2.53
HIST1H3AP68431 MIR215-201ENST00000384858 110 ntBASIC-0.74□□□□□ -2.53
HIST1H3AP68431 MIR514A2-201ENST00000385131 88 ntBASIC-0.74□□□□□ -2.53
HIST1H3AP68431 MIR514A3-201ENST00000385132 88 ntBASIC-0.74□□□□□ -2.53
HIST1H3AP68431 RNU4-83P-201ENST00000410863 133 ntBASIC-0.74□□□□□ -2.53
HIST1H3AP68431 MTCO1P5-201ENST00000433573 344 ntBASIC-0.74□□□□□ -2.53
HIST1H3AP68431 snoU13.2-201ENST00000459201 104 ntBASIC-0.74□□□□□ -2.53
HIST1H3AP68431 RNU7-87P-201ENST00000459343 62 ntBASIC-0.74□□□□□ -2.53
HIST1H3AP68431 SNORA31.14-201ENST00000516728 116 ntBASIC-0.74□□□□□ -2.53
HIST1H3AP68431 RNU2-12P-201ENST00000517216 168 ntBASIC-0.74□□□□□ -2.53
HIST1H3AP68431 AC121247.2-201ENST00000604776 136 ntBASIC-0.74□□□□□ -2.53
HIST1H3AP68431 MIR8066-201ENST00000617280 78 ntBASIC-0.74□□□□□ -2.53
HIST1H3AP68431 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.75□□□□□ -2.53
HIST1H3AP68431 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.75□□□□□ -2.53
HIST1H3AP68431 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.75□□□□□ -2.53
HIST1H3AP68431 SNORD114-11-201ENST00000363738 75 ntBASIC-0.75□□□□□ -2.53
HIST1H3AP68431 RNU6-522P-201ENST00000364497 107 ntBASIC-0.75□□□□□ -2.53
HIST1H3AP68431 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.75□□□□□ -2.53
HIST1H3AP68431 MT-TF-201ENST00000387314 71 ntBASIC-0.75□□□□□ -2.53
HIST1H3AP68431 SNORD93-201ENST00000408813 74 ntBASIC-0.75□□□□□ -2.53
HIST1H3AP68431 HMGN2P22-201ENST00000427588 175 ntBASIC-0.75□□□□□ -2.53
HIST1H3AP68431 RNU6-897P-201ENST00000517135 105 ntBASIC-0.75□□□□□ -2.53
HIST1H3AP68431 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.75□□□□□ -2.53
HIST1H3AP68431 ZNF519P2-201ENST00000557032 169 ntBASIC-0.75□□□□□ -2.53
HIST1H3AP68431 AC006600.1-201ENST00000572529 153 ntBASIC-0.75□□□□□ -2.53
HIST1H3AP68431 MIR3925-201ENST00000584674 77 ntBASIC-0.75□□□□□ -2.53
HIST1H3AP68431 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.75□□□□□ -2.53
HIST1H3AP68431 AL162726.3-218ENST00000636401 95 ntBASIC-0.75□□□□□ -2.53
HIST1H3AP68431 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.76□□□□□ -2.53
HIST1H3AP68431 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.76□□□□□ -2.53
HIST1H3AP68431 RNU6-306P-201ENST00000384617 107 ntBASIC-0.76□□□□□ -2.53
HIST1H3AP68431 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.76□□□□□ -2.53
HIST1H3AP68431 RNU6-261P-201ENST00000459506 102 ntBASIC-0.76□□□□□ -2.53
HIST1H3AP68431 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.76□□□□□ -2.53
HIST1H3AP68431 LRRC34P1-201ENST00000542742 915 ntBASIC-0.76□□□□□ -2.53
HIST1H3AP68431 AC004467.1-201ENST00000615678 330 ntBASIC-0.76□□□□□ -2.53
HIST1H3AP68431 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.77□□□□□ -2.53
HIST1H3AP68431 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.77□□□□□ -2.53
HIST1H3AP68431 SNORA8.3-201ENST00000384679 139 ntBASIC-0.77□□□□□ -2.53
HIST1H3AP68431 SNORD28-201ENST00000384706 75 ntBASIC-0.77□□□□□ -2.53
HIST1H3AP68431 SNORA75.4-201ENST00000391278 119 ntBASIC-0.77□□□□□ -2.53
HIST1H3AP68431 MIR190B-201ENST00000401119 79 ntBASIC-0.77□□□□□ -2.53
HIST1H3AP68431 CHEK2P4-201ENST00000450340 246 ntBASIC-0.77□□□□□ -2.53
HIST1H3AP68431 AP001180.6-201ENST00000584918 159 ntBASIC-0.77□□□□□ -2.53
HIST1H3AP68431 RNU6-740P-201ENST00000364734 105 ntBASIC-0.78□□□□□ -2.53
HIST1H3AP68431 RNU6-192P-201ENST00000391253 100 ntBASIC-0.78□□□□□ -2.53
HIST1H3AP68431 RNU6-584P-201ENST00000410350 95 ntBASIC-0.78□□□□□ -2.53
HIST1H3AP68431 RPL21P38-201ENST00000418090 167 ntBASIC-0.78□□□□□ -2.53
HIST1H3AP68431 AC083798.1-201ENST00000472671 131 ntBASIC-0.78□□□□□ -2.53
HIST1H3AP68431 RNU6-958P-201ENST00000516995 106 ntBASIC-0.78□□□□□ -2.53
HIST1H3AP68431 AC105029.1-201ENST00000520250 669 ntBASIC-0.78□□□□□ -2.53
HIST1H3AP68431 AC009094.1-201ENST00000564443 426 ntBASIC-0.78□□□□□ -2.53
HIST1H3AP68431 MIR4639-201ENST00000584938 69 ntBASIC-0.78□□□□□ -2.53
HIST1H3AP68431 MIR30D-201ENST00000362283 70 ntBASIC-0.79□□□□□ -2.54
HIST1H3AP68431 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.79□□□□□ -2.54
HIST1H3AP68431 Y_RNA.373-201ENST00000365600 103 ntBASIC-0.79□□□□□ -2.54
HIST1H3AP68431 SNORA24-201ENST00000384096 131 ntBASIC-0.79□□□□□ -2.54
HIST1H3AP68431 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.79□□□□□ -2.54
HIST1H3AP68431 RNU2-61P-201ENST00000411069 191 ntBASIC-0.79□□□□□ -2.54
HIST1H3AP68431 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.79□□□□□ -2.54
HIST1H3AP68431 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.79□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms