Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 SNORA72.4-201ENST00000384174 132 ntBASIC0.83□□□□□ -2.28
APOC4P55056 MIR516B2-201ENST00000385190 85 ntBASIC0.83□□□□□ -2.28
APOC4P55056 Y_RNA.604-201ENST00000410574 102 ntBASIC0.83□□□□□ -2.28
APOC4P55056 AL591704.2-201ENST00000421658 181 ntBASIC0.83□□□□□ -2.28
APOC4P55056 RPL39P39-201ENST00000455840 151 ntBASIC0.83□□□□□ -2.28
APOC4P55056 RNU7-141P-201ENST00000459304 62 ntBASIC0.83□□□□□ -2.28
APOC4P55056 COX6CP14-201ENST00000469580 174 ntBASIC0.83□□□□□ -2.28
APOC4P55056 RPS26P48-201ENST00000491713 339 ntBASIC0.83□□□□□ -2.28
APOC4P55056 RPL23AP54-201ENST00000495129 419 ntBASIC0.83□□□□□ -2.28
APOC4P55056 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.83□□□□□ -2.28
APOC4P55056 UBL5P1-201ENST00000507979 193 ntBASIC0.83□□□□□ -2.28
APOC4P55056 SNORD79.1-201ENST00000516069 84 ntBASIC0.83□□□□□ -2.28
APOC4P55056 RNU6-496P-201ENST00000516145 99 ntBASIC0.83□□□□□ -2.28
APOC4P55056 RNU6-191P-201ENST00000516295 94 ntBASIC0.83□□□□□ -2.28
APOC4P55056 SNORD111.1-201ENST00000516421 86 ntBASIC0.83□□□□□ -2.28
APOC4P55056 SNORA74.3-201ENST00000517108 154 ntBASIC0.83□□□□□ -2.28
APOC4P55056 AC068338.1-201ENST00000565567 176 ntBASIC0.83□□□□□ -2.28
APOC4P55056 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
APOC4P55056 MIR376A1-201ENST00000616574 68 ntBASIC0.83□□□□□ -2.28
APOC4P55056 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
APOC4P55056 Y_RNA.136-201ENST00000363444 102 ntBASIC0.82□□□□□ -2.28
APOC4P55056 RNU6-1209P-201ENST00000363655 107 ntBASIC0.82□□□□□ -2.28
APOC4P55056 Y_RNA.796-201ENST00000364268 102 ntBASIC0.82□□□□□ -2.28
APOC4P55056 Y_RNA.799-201ENST00000364992 102 ntBASIC0.82□□□□□ -2.28
APOC4P55056 RNU6-53P-201ENST00000365367 106 ntBASIC0.82□□□□□ -2.28
APOC4P55056 MIR136-201ENST00000385207 82 ntBASIC0.82□□□□□ -2.28
APOC4P55056 SNORA26.5-201ENST00000391215 123 ntBASIC0.82□□□□□ -2.28
APOC4P55056 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.82□□□□□ -2.28
APOC4P55056 RNU6-101P-201ENST00000410323 104 ntBASIC0.82□□□□□ -2.28
APOC4P55056 RNU6-121P-201ENST00000410525 99 ntBASIC0.82□□□□□ -2.28
APOC4P55056 NDUFA4P2-201ENST00000489989 244 ntBASIC0.82□□□□□ -2.28
APOC4P55056 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.82□□□□□ -2.28
APOC4P55056 Y_RNA.711-201ENST00000516993 102 ntBASIC0.82□□□□□ -2.28
APOC4P55056 Y_RNA.714-201ENST00000517065 90 ntBASIC0.82□□□□□ -2.28
APOC4P55056 Y_RNA.721-201ENST00000517207 102 ntBASIC0.82□□□□□ -2.28
APOC4P55056 RNU6-988P-201ENST00000519081 107 ntBASIC0.82□□□□□ -2.28
APOC4P55056 AL391903.3-201ENST00000612158 163 ntBASIC0.82□□□□□ -2.28
APOC4P55056 RNU6-674P-201ENST00000363831 107 ntBASIC0.81□□□□□ -2.28
APOC4P55056 Y_RNA.389-201ENST00000383924 113 ntBASIC0.81□□□□□ -2.28
APOC4P55056 RNU6-1248P-201ENST00000391096 64 ntBASIC0.81□□□□□ -2.28
APOC4P55056 SNORA36B-201ENST00000410438 131 ntBASIC0.81□□□□□ -2.28
APOC4P55056 Y_RNA.602-201ENST00000410535 92 ntBASIC0.81□□□□□ -2.28
APOC4P55056 MRPL35P3-201ENST00000421557 364 ntBASIC0.81□□□□□ -2.28
APOC4P55056 AC002429.1-201ENST00000437672 148 ntBASIC0.81□□□□□ -2.28
APOC4P55056 HMGN2P32-201ENST00000444648 269 ntBASIC0.81□□□□□ -2.28
APOC4P55056 RNA5SP102-201ENST00000516865 106 ntBASIC0.81□□□□□ -2.28
APOC4P55056 AC090821.2-201ENST00000523552 176 ntBASIC0.81□□□□□ -2.28
APOC4P55056 MIR6504-201ENST00000613520 61 ntBASIC0.81□□□□□ -2.28
APOC4P55056 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
APOC4P55056 Y_RNA.191-201ENST00000363972 113 ntBASIC0.8□□□□□ -2.28
APOC4P55056 Y_RNA.226-201ENST00000364337 114 ntBASIC0.8□□□□□ -2.28
APOC4P55056 Y_RNA.380-201ENST00000365663 111 ntBASIC0.8□□□□□ -2.28
APOC4P55056 SNORA80D-201ENST00000384488 135 ntBASIC0.8□□□□□ -2.28
APOC4P55056 MIR222-201ENST00000384992 110 ntBASIC0.8□□□□□ -2.28
APOC4P55056 Y_RNA.581-201ENST00000391017 97 ntBASIC0.8□□□□□ -2.28
APOC4P55056 MIR548P-201ENST00000408336 84 ntBASIC0.8□□□□□ -2.28
APOC4P55056 MIR1287-201ENST00000408492 90 ntBASIC0.8□□□□□ -2.28
APOC4P55056 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.8□□□□□ -2.28
APOC4P55056 SNRPGP14-201ENST00000435400 219 ntBASIC0.8□□□□□ -2.28
APOC4P55056 AC245047.8-201ENST00000456455 284 ntBASIC0.8□□□□□ -2.28
APOC4P55056 RNU6-437P-201ENST00000459408 95 ntBASIC0.8□□□□□ -2.28
APOC4P55056 RNU6-764P-201ENST00000516396 105 ntBASIC0.8□□□□□ -2.28
APOC4P55056 AP003716.2-201ENST00000528260 108 ntBASIC0.8□□□□□ -2.28
APOC4P55056 AC020661.2-201ENST00000560114 134 ntBASIC0.8□□□□□ -2.28
APOC4P55056 MIR4661-201ENST00000582720 75 ntBASIC0.8□□□□□ -2.28
APOC4P55056 AC134026.1-201ENST00000623249 2239 ntBASIC0.79□□□□□ -2.28
APOC4P55056 RNU4-90P-201ENST00000362773 141 ntBASIC0.79□□□□□ -2.28
APOC4P55056 RNU6-797P-201ENST00000363101 109 ntBASIC0.79□□□□□ -2.28
APOC4P55056 Y_RNA.158-201ENST00000363651 101 ntBASIC0.79□□□□□ -2.28
APOC4P55056 Y_RNA.214-201ENST00000364201 112 ntBASIC0.79□□□□□ -2.28
APOC4P55056 Y_RNA.216-201ENST00000364205 93 ntBASIC0.79□□□□□ -2.28
APOC4P55056 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
APOC4P55056 MIR1276-201ENST00000408707 83 ntBASIC0.79□□□□□ -2.28
APOC4P55056 MIR1278-201ENST00000408753 81 ntBASIC0.79□□□□□ -2.28
APOC4P55056 AC063976.4-201ENST00000421971 163 ntBASIC0.79□□□□□ -2.28
APOC4P55056 ELOCP20-201ENST00000422460 345 ntBASIC0.79□□□□□ -2.28
APOC4P55056 MTCO2P12-201ENST00000427426 682 ntBASIC0.79□□□□□ -2.28
APOC4P55056 MTCO1P5-201ENST00000433573 344 ntBASIC0.79□□□□□ -2.28
APOC4P55056 AC098869.1-201ENST00000481627 292 ntBASIC0.79□□□□□ -2.28
APOC4P55056 RNU7-41P-201ENST00000515917 61 ntBASIC0.79□□□□□ -2.28
APOC4P55056 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.79□□□□□ -2.28
APOC4P55056 SNORA18.7-201ENST00000516910 131 ntBASIC0.79□□□□□ -2.28
APOC4P55056 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.79□□□□□ -2.28
APOC4P55056 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.79□□□□□ -2.28
APOC4P55056 AC087685.1-201ENST00000587507 141 ntBASIC0.79□□□□□ -2.28
APOC4P55056 AC005357.1-201ENST00000588399 301 ntBASIC0.79□□□□□ -2.28
APOC4P55056 snoU2_19.2-201ENST00000363024 80 ntBASIC0.78□□□□□ -2.28
APOC4P55056 SNORD14E-201ENST00000364009 85 ntBASIC0.78□□□□□ -2.28
APOC4P55056 SNORA22-201ENST00000383907 134 ntBASIC0.78□□□□□ -2.28
APOC4P55056 SNORA22C-201ENST00000384614 134 ntBASIC0.78□□□□□ -2.28
APOC4P55056 Y_RNA.569-201ENST00000384749 103 ntBASIC0.78□□□□□ -2.28
APOC4P55056 MIR520C-201ENST00000385005 87 ntBASIC0.78□□□□□ -2.28
APOC4P55056 MIR15B-201ENST00000385045 98 ntBASIC0.78□□□□□ -2.28
APOC4P55056 SNORA75.2-201ENST00000391138 150 ntBASIC0.78□□□□□ -2.28
APOC4P55056 SNORA75.3-201ENST00000391231 150 ntBASIC0.78□□□□□ -2.28
APOC4P55056 MIR1285-1-201ENST00000408593 84 ntBASIC0.78□□□□□ -2.28
APOC4P55056 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.78□□□□□ -2.28
APOC4P55056 RNU7-21P-201ENST00000459430 62 ntBASIC0.78□□□□□ -2.28
APOC4P55056 SNORD123-201ENST00000459473 70 ntBASIC0.78□□□□□ -2.28
APOC4P55056 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms