Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 RNU7-141P-201ENST00000459304 62 ntBASIC1.46□□□□□ -2.18
LIMK2P53671 COX6CP14-201ENST00000469580 174 ntBASIC1.46□□□□□ -2.18
LIMK2P53671 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.46□□□□□ -2.18
LIMK2P53671 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.46□□□□□ -2.18
LIMK2P53671 RNU7-172P-201ENST00000517125 64 ntBASIC1.46□□□□□ -2.18
LIMK2P53671 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.46□□□□□ -2.18
LIMK2P53671 SNORA77B-201ENST00000578179 125 ntBASIC1.46□□□□□ -2.18
LIMK2P53671 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
LIMK2P53671 ZNF209P-201ENST00000593450 2304 ntBASIC1.45□□□□□ -2.18
LIMK2P53671 Y_RNA.199-201ENST00000364014 102 ntBASIC1.45□□□□□ -2.18
LIMK2P53671 RNU4-13P-201ENST00000364019 141 ntBASIC1.45□□□□□ -2.18
LIMK2P53671 U8.7-201ENST00000364940 136 ntBASIC1.45□□□□□ -2.18
LIMK2P53671 Y_RNA.304-201ENST00000365011 112 ntBASIC1.45□□□□□ -2.18
LIMK2P53671 MTCO2P33-201ENST00000402100 465 ntBASIC1.45□□□□□ -2.18
LIMK2P53671 AL162725.1-201ENST00000435405 301 ntBASIC1.45□□□□□ -2.18
LIMK2P53671 AC005908.1-201ENST00000468701 347 ntBASIC1.45□□□□□ -2.18
LIMK2P53671 RNU7-99P-201ENST00000516271 62 ntBASIC1.45□□□□□ -2.18
LIMK2P53671 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.45□□□□□ -2.18
LIMK2P53671 AC013791.1-201ENST00000616619 62 ntBASIC1.45□□□□□ -2.18
LIMK2P53671 AC068647.2-201ENST00000637380 353 ntBASIC1.45□□□□□ -2.18
LIMK2P53671 MIR411-201ENST00000362239 96 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 Y_RNA.83-201ENST00000363005 113 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 RNU6-653P-201ENST00000363074 106 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 RNU6-899P-201ENST00000363947 107 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 Y_RNA.226-201ENST00000364337 114 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 Y_RNA.297-201ENST00000364950 91 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 RNU6-1323P-201ENST00000384025 107 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 RNU6-136P-201ENST00000384663 107 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
LIMK2P53671 RNA5SP323-201ENST00000391094 133 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 RNU6-1186P-201ENST00000410429 97 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 AC010154.1-201ENST00000425857 269 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 AL354695.1-201ENST00000427935 228 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 snoU13.27-201ENST00000459278 104 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 AC117454.1-201ENST00000491120 168 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.44□□□□□ -2.18
LIMK2P53671 RNU6-1278P-201ENST00000516130 107 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 RNU7-115P-201ENST00000516433 55 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 RNA5SP61-201ENST00000516453 100 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 MIR5692C2-201ENST00000577959 77 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 MIR4422-201ENST00000581938 83 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 AC073413.2-201ENST00000604332 360 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 AP003357.1-201ENST00000604497 148 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 AC005972.2-201ENST00000604690 348 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 AL359075.3-201ENST00000613288 217 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 AL365265.1-201ENST00000621045 234 ntBASIC1.44□□□□□ -2.18
LIMK2P53671 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
LIMK2P53671 MIR302D-201ENST00000362275 68 ntBASIC1.43□□□□□ -2.18
LIMK2P53671 SNORA7.1-201ENST00000363750 139 ntBASIC1.43□□□□□ -2.18
LIMK2P53671 RNU2-64P-201ENST00000411315 191 ntBASIC1.43□□□□□ -2.18
LIMK2P53671 RNY3P16-201ENST00000516338 101 ntBASIC1.43□□□□□ -2.18
LIMK2P53671 RNU1-142P-201ENST00000516682 145 ntBASIC1.43□□□□□ -2.18
LIMK2P53671 Y_RNA.700-201ENST00000516806 100 ntBASIC1.43□□□□□ -2.18
LIMK2P53671 RNU1-92P-201ENST00000517017 135 ntBASIC1.43□□□□□ -2.18
LIMK2P53671 AC024405.2-202ENST00000532731 184 ntBASIC1.43□□□□□ -2.18
LIMK2P53671 MIR4421-201ENST00000578133 69 ntBASIC1.43□□□□□ -2.18
LIMK2P53671 MIR548AY-201ENST00000617669 107 ntBASIC1.43□□□□□ -2.18
LIMK2P53671 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
LIMK2P53671 Y_RNA.262-201ENST00000364641 102 ntBASIC1.42□□□□□ -2.18
LIMK2P53671 Y_RNA.327-201ENST00000365201 102 ntBASIC1.42□□□□□ -2.18
LIMK2P53671 Y_RNA.785-201ENST00000384290 109 ntBASIC1.42□□□□□ -2.18
LIMK2P53671 RNU6-376P-201ENST00000384731 106 ntBASIC1.42□□□□□ -2.18
LIMK2P53671 MT-TR-201ENST00000387439 65 ntBASIC1.42□□□□□ -2.18
LIMK2P53671 RNU1-78P-201ENST00000391248 165 ntBASIC1.42□□□□□ -2.18
LIMK2P53671 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.42□□□□□ -2.18
LIMK2P53671 RN7SKP51-201ENST00000410781 304 ntBASIC1.42□□□□□ -2.18
LIMK2P53671 AL161935.2-201ENST00000414627 60 ntBASIC1.42□□□□□ -2.18
LIMK2P53671 COX6CP10-201ENST00000416832 224 ntBASIC1.42□□□□□ -2.18
LIMK2P53671 RPS4XP11-201ENST00000446897 772 ntBASIC1.42□□□□□ -2.18
LIMK2P53671 AC245517.4-201ENST00000448601 281 ntBASIC1.42□□□□□ -2.18
LIMK2P53671 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.42□□□□□ -2.18
LIMK2P53671 RPS26P45-201ENST00000471748 340 ntBASIC1.42□□□□□ -2.18
LIMK2P53671 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.42□□□□□ -2.18
LIMK2P53671 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.42□□□□□ -2.18
LIMK2P53671 AC100767.1-201ENST00000528178 123 ntBASIC1.42□□□□□ -2.18
LIMK2P53671 AC127455.1-201ENST00000565496 145 ntBASIC1.42□□□□□ -2.18
LIMK2P53671 MIR8070-201ENST00000616510 88 ntBASIC1.42□□□□□ -2.18
LIMK2P53671 AC100821.1-201ENST00000523153 2479 ntBASIC1.42□□□□□ -2.18
LIMK2P53671 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
LIMK2P53671 Y_RNA.29-201ENST00000362570 113 ntBASIC1.41□□□□□ -2.18
LIMK2P53671 U8.1-201ENST00000362843 134 ntBASIC1.41□□□□□ -2.18
LIMK2P53671 RNU6-1205P-201ENST00000363625 106 ntBASIC1.41□□□□□ -2.18
LIMK2P53671 RNU4-10P-201ENST00000364383 140 ntBASIC1.41□□□□□ -2.18
LIMK2P53671 RNU6-923P-201ENST00000364753 107 ntBASIC1.41□□□□□ -2.18
LIMK2P53671 RNU6-47P-201ENST00000383866 107 ntBASIC1.41□□□□□ -2.18
LIMK2P53671 SNORA36B-201ENST00000410438 131 ntBASIC1.41□□□□□ -2.18
LIMK2P53671 MTND5P15-201ENST00000434246 349 ntBASIC1.41□□□□□ -2.18
LIMK2P53671 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.41□□□□□ -2.18
LIMK2P53671 Y_RNA.644-201ENST00000459006 113 ntBASIC1.41□□□□□ -2.18
LIMK2P53671 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.41□□□□□ -2.18
LIMK2P53671 AL163195.1-201ENST00000496941 348 ntBASIC1.41□□□□□ -2.18
LIMK2P53671 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.41□□□□□ -2.18
LIMK2P53671 Y_RNA.674-201ENST00000516362 113 ntBASIC1.41□□□□□ -2.18
LIMK2P53671 RNU7-116P-201ENST00000516940 62 ntBASIC1.41□□□□□ -2.18
LIMK2P53671 SNORA81.3-201ENST00000517283 198 ntBASIC1.41□□□□□ -2.18
LIMK2P53671 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.41□□□□□ -2.18
LIMK2P53671 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
LIMK2P53671 MIR4308-201ENST00000580634 81 ntBASIC1.41□□□□□ -2.18
LIMK2P53671 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms