Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RNU6-1020P-201ENST00000363684 107 ntBASIC1.97□□□□□ -2.09
COPAP53621 RNU6-969P-201ENST00000383900 105 ntBASIC1.97□□□□□ -2.09
COPAP53621 RNU6-360P-201ENST00000390944 104 ntBASIC1.97□□□□□ -2.09
COPAP53621 RNU6-383P-201ENST00000410864 94 ntBASIC1.97□□□□□ -2.09
COPAP53621 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.97□□□□□ -2.09
COPAP53621 Y_RNA.644-201ENST00000459006 113 ntBASIC1.97□□□□□ -2.09
COPAP53621 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.97□□□□□ -2.09
COPAP53621 RNY3P16-201ENST00000516338 101 ntBASIC1.97□□□□□ -2.09
COPAP53621 Y_RNA.674-201ENST00000516362 113 ntBASIC1.97□□□□□ -2.09
COPAP53621 RNU7-28P-201ENST00000516759 62 ntBASIC1.97□□□□□ -2.09
COPAP53621 AC012493.3-201ENST00000604494 112 ntBASIC1.97□□□□□ -2.09
COPAP53621 SNORA28-201ENST00000606769 126 ntBASIC1.97□□□□□ -2.09
COPAP53621 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
COPAP53621 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
COPAP53621 SNORA40.18-201ENST00000391200 128 ntBASIC1.96□□□□□ -2.1
COPAP53621 AL034345.1-201ENST00000407768 123 ntBASIC1.96□□□□□ -2.1
COPAP53621 AC023449.1-201ENST00000454464 154 ntBASIC1.96□□□□□ -2.1
COPAP53621 HMGN1P7-201ENST00000491722 313 ntBASIC1.96□□□□□ -2.1
COPAP53621 RNU6-414P-201ENST00000363705 104 ntBASIC1.95□□□□□ -2.1
COPAP53621 RNA5SP496-201ENST00000391240 109 ntBASIC1.95□□□□□ -2.1
COPAP53621 RNA5SP482-201ENST00000391269 118 ntBASIC1.95□□□□□ -2.1
COPAP53621 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.95□□□□□ -2.1
COPAP53621 AL445685.2-201ENST00000422551 342 ntBASIC1.95□□□□□ -2.1
COPAP53621 FTH1P12-201ENST00000432137 551 ntBASIC1.95□□□□□ -2.1
COPAP53621 RN7SKP164-201ENST00000516138 266 ntBASIC1.95□□□□□ -2.1
COPAP53621 Y_RNA.714-201ENST00000517065 90 ntBASIC1.95□□□□□ -2.1
COPAP53621 SNORA81.3-201ENST00000517283 198 ntBASIC1.95□□□□□ -2.1
COPAP53621 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
COPAP53621 RPL23AP91-201ENST00000569211 455 ntBASIC1.95□□□□□ -2.1
COPAP53621 AC103810.8-201ENST00000607347 118 ntBASIC1.95□□□□□ -2.1
COPAP53621 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
COPAP53621 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
COPAP53621 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
COPAP53621 RNU1-17P-201ENST00000363022 152 ntBASIC1.94□□□□□ -2.1
COPAP53621 Y_RNA.253-201ENST00000364562 112 ntBASIC1.94□□□□□ -2.1
COPAP53621 RNU6-439P-201ENST00000384188 106 ntBASIC1.94□□□□□ -2.1
COPAP53621 Y_RNA.785-201ENST00000384290 109 ntBASIC1.94□□□□□ -2.1
COPAP53621 RNU6-1031P-201ENST00000384773 107 ntBASIC1.94□□□□□ -2.1
COPAP53621 MIR30A-201ENST00000385092 71 ntBASIC1.94□□□□□ -2.1
COPAP53621 AC003989.2-201ENST00000440224 169 ntBASIC1.94□□□□□ -2.1
COPAP53621 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.94□□□□□ -2.1
COPAP53621 RNU6-182P-201ENST00000516970 105 ntBASIC1.94□□□□□ -2.1
COPAP53621 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
COPAP53621 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
COPAP53621 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
COPAP53621 MIR126-201ENST00000362291 85 ntBASIC1.93□□□□□ -2.1
COPAP53621 Y_RNA.7-201ENST00000362352 102 ntBASIC1.93□□□□□ -2.1
COPAP53621 SNORD68-201ENST00000363214 84 ntBASIC1.93□□□□□ -2.1
COPAP53621 RNU6-1209P-201ENST00000363655 107 ntBASIC1.93□□□□□ -2.1
COPAP53621 Y_RNA.229-201ENST00000364347 113 ntBASIC1.93□□□□□ -2.1
COPAP53621 RNU6-381P-201ENST00000391259 108 ntBASIC1.93□□□□□ -2.1
COPAP53621 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.93□□□□□ -2.1
COPAP53621 MIR1278-201ENST00000408753 81 ntBASIC1.93□□□□□ -2.1
COPAP53621 MLLT10P1-201ENST00000418346 262 ntBASIC1.93□□□□□ -2.1
COPAP53621 SNRPGP10-201ENST00000432323 225 ntBASIC1.93□□□□□ -2.1
COPAP53621 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.93□□□□□ -2.1
COPAP53621 AP002392.1-201ENST00000537692 208 ntBASIC1.93□□□□□ -2.1
COPAP53621 CBX3P4-201ENST00000538909 354 ntBASIC1.93□□□□□ -2.1
COPAP53621 AL591926.4-201ENST00000616895 298 ntBASIC1.93□□□□□ -2.1
COPAP53621 RNU6-661P-201ENST00000362409 107 ntBASIC1.92□□□□□ -2.1
COPAP53621 RNU6-103P-201ENST00000363686 107 ntBASIC1.92□□□□□ -2.1
COPAP53621 Y_RNA.796-201ENST00000364268 102 ntBASIC1.92□□□□□ -2.1
COPAP53621 Y_RNA.799-201ENST00000364992 102 ntBASIC1.92□□□□□ -2.1
COPAP53621 RNU4-70P-201ENST00000384579 139 ntBASIC1.92□□□□□ -2.1
COPAP53621 Y_RNA.572-201ENST00000384757 98 ntBASIC1.92□□□□□ -2.1
COPAP53621 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.92□□□□□ -2.1
COPAP53621 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.92□□□□□ -2.1
COPAP53621 RNU6-1007P-201ENST00000516586 107 ntBASIC1.92□□□□□ -2.1
COPAP53621 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.92□□□□□ -2.1
COPAP53621 MIR4308-201ENST00000580634 81 ntBASIC1.92□□□□□ -2.1
COPAP53621 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
COPAP53621 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
COPAP53621 RNU6-47P-201ENST00000383866 107 ntBASIC1.91□□□□□ -2.1
COPAP53621 Y_RNA.571-201ENST00000384753 98 ntBASIC1.91□□□□□ -2.1
COPAP53621 MIR616-201ENST00000385293 97 ntBASIC1.91□□□□□ -2.1
COPAP53621 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
COPAP53621 RNU6-907P-201ENST00000390924 102 ntBASIC1.91□□□□□ -2.1
COPAP53621 RNU6-131P-201ENST00000391144 107 ntBASIC1.91□□□□□ -2.1
COPAP53621 RNU6-918P-201ENST00000391219 106 ntBASIC1.91□□□□□ -2.1
COPAP53621 RN7SKP101-201ENST00000411376 320 ntBASIC1.91□□□□□ -2.1
COPAP53621 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.91□□□□□ -2.1
COPAP53621 AC245047.8-201ENST00000456455 284 ntBASIC1.91□□□□□ -2.1
COPAP53621 RNA5SP458-201ENST00000516188 119 ntBASIC1.91□□□□□ -2.1
COPAP53621 RNU2-4P-201ENST00000606190 192 ntBASIC1.91□□□□□ -2.1
COPAP53621 AL391903.3-201ENST00000612158 163 ntBASIC1.91□□□□□ -2.1
COPAP53621 AC021506.2-201ENST00000612354 169 ntBASIC1.91□□□□□ -2.1
COPAP53621 Y_RNA.121-201ENST00000363309 113 ntBASIC1.9□□□□□ -2.11
COPAP53621 snoU2_19.4-201ENST00000364329 80 ntBASIC1.9□□□□□ -2.11
COPAP53621 Y_RNA.238-201ENST00000364441 102 ntBASIC1.9□□□□□ -2.11
COPAP53621 MIR1267-201ENST00000408723 78 ntBASIC1.9□□□□□ -2.11
COPAP53621 Z98949.2-201ENST00000440996 144 ntBASIC1.9□□□□□ -2.11
COPAP53621 OR9P1P-201ENST00000496431 281 ntBASIC1.9□□□□□ -2.11
COPAP53621 MIR4285-201ENST00000581001 85 ntBASIC1.9□□□□□ -2.11
COPAP53621 AC072026.1-201ENST00000605023 201 ntBASIC1.9□□□□□ -2.11
COPAP53621 AC004792.1-201ENST00000614523 137 ntBASIC1.9□□□□□ -2.11
COPAP53621 MIR8074-201ENST00000615081 81 ntBASIC1.9□□□□□ -2.11
COPAP53621 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.9□□□□□ -2.11
COPAP53621 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
COPAP53621 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COPAP53621 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms