Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.64□□□□□ -2.31
MSH6P52701 Y_RNA.599-201ENST00000410489 109 ntBASIC0.64□□□□□ -2.31
MSH6P52701 RNU6-1304P-201ENST00000411374 106 ntBASIC0.64□□□□□ -2.31
MSH6P52701 RPS3AP1-201ENST00000413190 320 ntBASIC0.64□□□□□ -2.31
MSH6P52701 MLLT10P1-201ENST00000418346 262 ntBASIC0.64□□□□□ -2.31
MSH6P52701 FABP5P4-201ENST00000437203 171 ntBASIC0.64□□□□□ -2.31
MSH6P52701 CHEK2P4-201ENST00000450340 246 ntBASIC0.64□□□□□ -2.31
MSH6P52701 MTCO3P10-201ENST00000455912 772 ntBASIC0.64□□□□□ -2.31
MSH6P52701 RNU7-41P-201ENST00000515917 61 ntBASIC0.64□□□□□ -2.31
MSH6P52701 AC025253.1-201ENST00000613623 543 ntBASIC0.64□□□□□ -2.31
MSH6P52701 U6atac.1-201ENST00000616025 117 ntBASIC0.64□□□□□ -2.31
MSH6P52701 SEPT14P17-201ENST00000617978 177 ntBASIC0.64□□□□□ -2.31
MSH6P52701 Y_RNA.146-201ENST00000363549 102 ntBASIC0.63□□□□□ -2.31
MSH6P52701 RNU6-324P-201ENST00000363957 106 ntBASIC0.63□□□□□ -2.31
MSH6P52701 SNORD50B-201ENST00000364995 70 ntBASIC0.63□□□□□ -2.31
MSH6P52701 SNORA72-201ENST00000384339 132 ntBASIC0.63□□□□□ -2.31
MSH6P52701 MIR1185-1-201ENST00000408598 86 ntBASIC0.63□□□□□ -2.31
MSH6P52701 RNU6-155P-201ENST00000516347 100 ntBASIC0.63□□□□□ -2.31
MSH6P52701 AC131055.1-201ENST00000584626 316 ntBASIC0.63□□□□□ -2.31
MSH6P52701 AC113139.1-201ENST00000605049 239 ntBASIC0.63□□□□□ -2.31
MSH6P52701 AC011476.5-201ENST00000615594 130 ntBASIC0.63□□□□□ -2.31
MSH6P52701 U2.1-201ENST00000618978 145 ntBASIC0.63□□□□□ -2.31
MSH6P52701 Y_RNA.518-201ENST00000384552 113 ntBASIC0.62□□□□□ -2.31
MSH6P52701 MIR1265-201ENST00000408444 86 ntBASIC0.62□□□□□ -2.31
MSH6P52701 MTND1P2-201ENST00000430604 821 ntBASIC0.62□□□□□ -2.31
MSH6P52701 Y_RNA.653-201ENST00000459091 95 ntBASIC0.62□□□□□ -2.31
MSH6P52701 MIR4764-201ENST00000580680 88 ntBASIC0.62□□□□□ -2.31
MSH6P52701 MIR103A2-201ENST00000362154 78 ntBASIC0.61□□□□□ -2.31
MSH6P52701 Y_RNA.27-201ENST00000362540 103 ntBASIC0.61□□□□□ -2.31
MSH6P52701 RNU6-490P-201ENST00000362985 107 ntBASIC0.61□□□□□ -2.31
MSH6P52701 SNORA25.3-201ENST00000363205 127 ntBASIC0.61□□□□□ -2.31
MSH6P52701 RNU4-67P-201ENST00000364569 141 ntBASIC0.61□□□□□ -2.31
MSH6P52701 snoU2-30.1-201ENST00000365012 70 ntBASIC0.61□□□□□ -2.31
MSH6P52701 Y_RNA.314-201ENST00000365114 102 ntBASIC0.61□□□□□ -2.31
MSH6P52701 Y_RNA.330-201ENST00000365230 109 ntBASIC0.61□□□□□ -2.31
MSH6P52701 RNU6-1323P-201ENST00000384025 107 ntBASIC0.61□□□□□ -2.31
MSH6P52701 RNU6-708P-201ENST00000384217 107 ntBASIC0.61□□□□□ -2.31
MSH6P52701 SNORA50A-201ENST00000384225 134 ntBASIC0.61□□□□□ -2.31
MSH6P52701 MIR559-201ENST00000385188 96 ntBASIC0.61□□□□□ -2.31
MSH6P52701 MCFD2P1-201ENST00000417812 300 ntBASIC0.61□□□□□ -2.31
MSH6P52701 AL035398.1-201ENST00000430869 322 ntBASIC0.61□□□□□ -2.31
MSH6P52701 RNU7-43P-201ENST00000516554 64 ntBASIC0.61□□□□□ -2.31
MSH6P52701 SNORA18.7-201ENST00000516910 131 ntBASIC0.61□□□□□ -2.31
MSH6P52701 Y_RNA.329-201ENST00000365209 107 ntBASIC0.6□□□□□ -2.31
MSH6P52701 SNORD14.1-201ENST00000365609 90 ntBASIC0.6□□□□□ -2.31
MSH6P52701 MIR15B-201ENST00000385045 98 ntBASIC0.6□□□□□ -2.31
MSH6P52701 MIR605-201ENST00000385078 83 ntBASIC0.6□□□□□ -2.31
MSH6P52701 RNU6-131P-201ENST00000391144 107 ntBASIC0.6□□□□□ -2.31
MSH6P52701 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.6□□□□□ -2.31
MSH6P52701 U7.7-201ENST00000459276 60 ntBASIC0.6□□□□□ -2.31
MSH6P52701 SNORD123-201ENST00000459473 70 ntBASIC0.6□□□□□ -2.31
MSH6P52701 AC113410.1-201ENST00000505029 247 ntBASIC0.6□□□□□ -2.31
MSH6P52701 RN7SKP164-201ENST00000516138 266 ntBASIC0.6□□□□□ -2.31
MSH6P52701 RNU6-559P-201ENST00000516151 98 ntBASIC0.6□□□□□ -2.31
MSH6P52701 AC109810.1-201ENST00000534066 224 ntBASIC0.6□□□□□ -2.31
MSH6P52701 AL353765.1-201ENST00000605514 183 ntBASIC0.6□□□□□ -2.31
MSH6P52701 Y_RNA.310-201ENST00000365063 113 ntBASIC0.59□□□□□ -2.31
MSH6P52701 RNU6-710P-201ENST00000410424 105 ntBASIC0.59□□□□□ -2.31
MSH6P52701 AL390729.2-201ENST00000416137 156 ntBASIC0.59□□□□□ -2.31
MSH6P52701 SNRPGP10-201ENST00000432323 225 ntBASIC0.59□□□□□ -2.31
MSH6P52701 AC099799.1-201ENST00000439809 192 ntBASIC0.59□□□□□ -2.31
MSH6P52701 HMGN2P32-201ENST00000444648 269 ntBASIC0.59□□□□□ -2.31
MSH6P52701 AL157398.1-201ENST00000452981 186 ntBASIC0.59□□□□□ -2.31
MSH6P52701 TRBVB-201ENST00000477100 408 ntBASIC0.59□□□□□ -2.31
MSH6P52701 Y_RNA.714-201ENST00000517065 90 ntBASIC0.59□□□□□ -2.31
MSH6P52701 RN7SKP295-201ENST00000517264 153 ntBASIC0.59□□□□□ -2.31
MSH6P52701 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.59□□□□□ -2.31
MSH6P52701 U6.92-201ENST00000636464 89 ntBASIC0.59□□□□□ -2.31
MSH6P52701 RNU6-1175P-201ENST00000365200 107 ntBASIC0.58□□□□□ -2.32
MSH6P52701 Y_RNA.368-201ENST00000365547 113 ntBASIC0.58□□□□□ -2.32
MSH6P52701 Y_RNA.570-201ENST00000384750 101 ntBASIC0.58□□□□□ -2.32
MSH6P52701 MIR329-2-201ENST00000385029 84 ntBASIC0.58□□□□□ -2.32
MSH6P52701 Y_RNA.619-201ENST00000410951 90 ntBASIC0.58□□□□□ -2.32
MSH6P52701 AC138393.2-201ENST00000414742 246 ntBASIC0.58□□□□□ -2.32
MSH6P52701 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.58□□□□□ -2.32
MSH6P52701 AC096644.2-201ENST00000429278 159 ntBASIC0.58□□□□□ -2.32
MSH6P52701 RNU6-699P-201ENST00000517081 110 ntBASIC0.58□□□□□ -2.32
MSH6P52701 AC023827.1-201ENST00000569247 97 ntBASIC0.58□□□□□ -2.32
MSH6P52701 MIR4423-201ENST00000580922 80 ntBASIC0.58□□□□□ -2.32
MSH6P52701 AL355073.2-201ENST00000612106 557 ntBASIC0.58□□□□□ -2.32
MSH6P52701 AC133104.2-201ENST00000615272 193 ntBASIC0.58□□□□□ -2.32
MSH6P52701 AC010205.1-201ENST00000616668 449 ntBASIC0.58□□□□□ -2.32
MSH6P52701 MIR6759-201ENST00000638110 65 ntBASIC0.58□□□□□ -2.32
MSH6P52701 Y_RNA.341-201ENST00000365341 102 ntBASIC0.57□□□□□ -2.32
MSH6P52701 RNU6-110P-201ENST00000384508 104 ntBASIC0.57□□□□□ -2.32
MSH6P52701 AL392103.1-201ENST00000447000 198 ntBASIC0.57□□□□□ -2.32
MSH6P52701 AC091951.2-201ENST00000500762 203 ntBASIC0.57□□□□□ -2.32
MSH6P52701 RNU7-116P-201ENST00000516940 62 ntBASIC0.57□□□□□ -2.32
MSH6P52701 AP003327.1-201ENST00000529684 127 ntBASIC0.57□□□□□ -2.32
MSH6P52701 AC025627.3-201ENST00000582078 182 ntBASIC0.57□□□□□ -2.32
MSH6P52701 POLR3GP1-201ENST00000594073 261 ntBASIC0.57□□□□□ -2.32
MSH6P52701 VN1R91P-201ENST00000594377 169 ntBASIC0.57□□□□□ -2.32
MSH6P52701 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.57□□□□□ -2.32
MSH6P52701 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
MSH6P52701 RNU6-1335P-201ENST00000365426 107 ntBASIC0.57□□□□□ -2.32
MSH6P52701 Y_RNA.387-201ENST00000383918 102 ntBASIC0.57□□□□□ -2.32
MSH6P52701 Y_RNA.456-201ENST00000384232 111 ntBASIC0.57□□□□□ -2.32
MSH6P52701 RNU6-1297P-201ENST00000384415 104 ntBASIC0.57□□□□□ -2.32
MSH6P52701 MIR628-201ENST00000385229 95 ntBASIC0.57□□□□□ -2.32
MSH6P52701 MIR1302-7-201ENST00000408841 72 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms