Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 DEFB108E-201ENST00000524692 240 ntBASIC1.69□□□□□ -2.14
NEK3P51956 AL360085.1-201ENST00000604713 532 ntBASIC1.69□□□□□ -2.14
NEK3P51956 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.69□□□□□ -2.14
NEK3P51956 AP001282.2-201ENST00000616149 309 ntBASIC1.69□□□□□ -2.14
NEK3P51956 AC134026.1-201ENST00000623249 2239 ntBASIC1.68□□□□□ -2.14
NEK3P51956 Y_RNA.140-201ENST00000363474 103 ntBASIC1.68□□□□□ -2.14
NEK3P51956 SNORD14E-201ENST00000364009 85 ntBASIC1.68□□□□□ -2.14
NEK3P51956 Y_RNA.275-201ENST00000364726 110 ntBASIC1.68□□□□□ -2.14
NEK3P51956 RNA5SP496-201ENST00000391240 109 ntBASIC1.68□□□□□ -2.14
NEK3P51956 AL358176.2-201ENST00000425769 204 ntBASIC1.68□□□□□ -2.14
NEK3P51956 AC008269.2-201ENST00000561915 1105 ntBASIC1.68□□□□□ -2.14
NEK3P51956 Y_RNA.44-201ENST00000362676 108 ntBASIC1.67□□□□□ -2.14
NEK3P51956 RNU6-238P-201ENST00000363313 106 ntBASIC1.67□□□□□ -2.14
NEK3P51956 SNORD50B-201ENST00000364995 70 ntBASIC1.67□□□□□ -2.14
NEK3P51956 MIR1298-201ENST00000408783 112 ntBASIC1.67□□□□□ -2.14
NEK3P51956 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.67□□□□□ -2.14
NEK3P51956 BTF3P11-201ENST00000426582 477 ntBASIC1.67□□□□□ -2.14
NEK3P51956 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.67□□□□□ -2.14
NEK3P51956 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.67□□□□□ -2.14
NEK3P51956 RNU6-327P-201ENST00000516270 127 ntBASIC1.67□□□□□ -2.14
NEK3P51956 RNU6-1045P-201ENST00000516321 107 ntBASIC1.67□□□□□ -2.14
NEK3P51956 RN7SKP88-201ENST00000516847 250 ntBASIC1.67□□□□□ -2.14
NEK3P51956 AP000942.3-201ENST00000603702 160 ntBASIC1.67□□□□□ -2.14
NEK3P51956 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.67□□□□□ -2.14
NEK3P51956 7SK.8-201ENST00000612110 250 ntBASIC1.67□□□□□ -2.14
NEK3P51956 7SK.11-201ENST00000615477 250 ntBASIC1.67□□□□□ -2.14
NEK3P51956 MIR8065-201ENST00000620577 100 ntBASIC1.67□□□□□ -2.14
NEK3P51956 7SK.13-201ENST00000622040 250 ntBASIC1.67□□□□□ -2.14
NEK3P51956 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
NEK3P51956 Y_RNA.162-201ENST00000363683 102 ntBASIC1.66□□□□□ -2.14
NEK3P51956 RNU6-442P-201ENST00000383968 104 ntBASIC1.66□□□□□ -2.14
NEK3P51956 RNU6-662P-201ENST00000384253 104 ntBASIC1.66□□□□□ -2.14
NEK3P51956 Y_RNA.461-201ENST00000384263 103 ntBASIC1.66□□□□□ -2.14
NEK3P51956 Y_RNA.556-201ENST00000384677 113 ntBASIC1.66□□□□□ -2.14
NEK3P51956 MIR136-201ENST00000385207 82 ntBASIC1.66□□□□□ -2.14
NEK3P51956 SNORD41-201ENST00000386967 70 ntBASIC1.66□□□□□ -2.14
NEK3P51956 SNORA67.5-201ENST00000391036 107 ntBASIC1.66□□□□□ -2.14
NEK3P51956 AL603825.1-201ENST00000438481 80 ntBASIC1.66□□□□□ -2.14
NEK3P51956 RNU6-922P-201ENST00000516753 99 ntBASIC1.66□□□□□ -2.14
NEK3P51956 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
NEK3P51956 U2.14-201ENST00000615943 113 ntBASIC1.66□□□□□ -2.14
NEK3P51956 Y_RNA.237-201ENST00000364439 102 ntBASIC1.65□□□□□ -2.15
NEK3P51956 SNORD26-201ENST00000384147 75 ntBASIC1.65□□□□□ -2.15
NEK3P51956 MIR526A1-201ENST00000384897 85 ntBASIC1.65□□□□□ -2.15
NEK3P51956 MIR526A2-201ENST00000390198 65 ntBASIC1.65□□□□□ -2.15
NEK3P51956 SNORA17.3-201ENST00000391159 129 ntBASIC1.65□□□□□ -2.15
NEK3P51956 RPS29P23-201ENST00000458635 123 ntBASIC1.65□□□□□ -2.15
NEK3P51956 SNORD11-201ENST00000459124 84 ntBASIC1.65□□□□□ -2.15
NEK3P51956 MTCO2P24-201ENST00000515611 426 ntBASIC1.65□□□□□ -2.15
NEK3P51956 SCARNA15.1-201ENST00000516384 125 ntBASIC1.65□□□□□ -2.15
NEK3P51956 SCARNA24.2-201ENST00000516968 130 ntBASIC1.65□□□□□ -2.15
NEK3P51956 RPL23AP91-201ENST00000569211 455 ntBASIC1.65□□□□□ -2.15
NEK3P51956 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.65□□□□□ -2.15
NEK3P51956 MIR4724-201ENST00000579485 89 ntBASIC1.65□□□□□ -2.15
NEK3P51956 FAM106DP-201ENST00000586416 501 ntBASIC1.65□□□□□ -2.15
NEK3P51956 snoU18.1-201ENST00000629629 71 ntBASIC1.65□□□□□ -2.15
NEK3P51956 MIR367-201ENST00000362299 68 ntBASIC1.64□□□□□ -2.15
NEK3P51956 Y_RNA.14-201ENST00000362415 103 ntBASIC1.64□□□□□ -2.15
NEK3P51956 Y_RNA.47-201ENST00000362697 108 ntBASIC1.64□□□□□ -2.15
NEK3P51956 MIR802-201ENST00000390235 94 ntBASIC1.64□□□□□ -2.15
NEK3P51956 AC108667.1-201ENST00000428618 249 ntBASIC1.64□□□□□ -2.15
NEK3P51956 RPL39P39-201ENST00000455840 151 ntBASIC1.64□□□□□ -2.15
NEK3P51956 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.64□□□□□ -2.15
NEK3P51956 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.64□□□□□ -2.15
NEK3P51956 CYP3A52P-201ENST00000563326 91 ntBASIC1.64□□□□□ -2.15
NEK3P51956 AC008507.4-201ENST00000585464 127 ntBASIC1.64□□□□□ -2.15
NEK3P51956 AL442644.1-201ENST00000454390 3105 ntBASIC1.64□□□□□ -2.15
NEK3P51956 Y_RNA.82-201ENST00000363000 102 ntBASIC1.63□□□□□ -2.15
NEK3P51956 Y_RNA.92-201ENST00000363043 102 ntBASIC1.63□□□□□ -2.15
NEK3P51956 Y_RNA.235-201ENST00000364412 102 ntBASIC1.63□□□□□ -2.15
NEK3P51956 Y_RNA.306-201ENST00000365015 102 ntBASIC1.63□□□□□ -2.15
NEK3P51956 Y_RNA.312-201ENST00000365089 102 ntBASIC1.63□□□□□ -2.15
NEK3P51956 Y_RNA.322-201ENST00000365151 102 ntBASIC1.63□□□□□ -2.15
NEK3P51956 SNORD38C-201ENST00000384381 69 ntBASIC1.63□□□□□ -2.15
NEK3P51956 MIR1302-3-201ENST00000408128 138 ntBASIC1.63□□□□□ -2.15
NEK3P51956 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.63□□□□□ -2.15
NEK3P51956 RN7SKP101-201ENST00000411376 320 ntBASIC1.63□□□□□ -2.15
NEK3P51956 AC015922.2-201ENST00000435593 184 ntBASIC1.63□□□□□ -2.15
NEK3P51956 Y_RNA.650-201ENST00000459002 102 ntBASIC1.63□□□□□ -2.15
NEK3P51956 NDUFA4P2-201ENST00000489989 244 ntBASIC1.63□□□□□ -2.15
NEK3P51956 Y_RNA.777-201ENST00000516982 102 ntBASIC1.63□□□□□ -2.15
NEK3P51956 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.63□□□□□ -2.15
NEK3P51956 Y_RNA.771-201ENST00000598668 102 ntBASIC1.63□□□□□ -2.15
NEK3P51956 Y_RNA.789-201ENST00000622480 102 ntBASIC1.63□□□□□ -2.15
NEK3P51956 AL161722.3-201ENST00000605789 2983 ntBASIC1.62□□□□□ -2.15
NEK3P51956 RNU6-1289P-201ENST00000384431 106 ntBASIC1.62□□□□□ -2.15
NEK3P51956 Y_RNA.512-201ENST00000384518 102 ntBASIC1.62□□□□□ -2.15
NEK3P51956 MTND2P23-201ENST00000422990 651 ntBASIC1.62□□□□□ -2.15
NEK3P51956 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.62□□□□□ -2.15
NEK3P51956 RNU6-126P-201ENST00000516685 103 ntBASIC1.62□□□□□ -2.15
NEK3P51956 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.62□□□□□ -2.15
NEK3P51956 SNORD53B-201ENST00000577887 78 ntBASIC1.62□□□□□ -2.15
NEK3P51956 AL008718.3-201ENST00000610217 321 ntBASIC1.62□□□□□ -2.15
NEK3P51956 Y_RNA.802-201ENST00000614892 130 ntBASIC1.62□□□□□ -2.15
NEK3P51956 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
NEK3P51956 Y_RNA.293-201ENST00000364908 93 ntBASIC1.61□□□□□ -2.15
NEK3P51956 RNU6-472P-201ENST00000384299 107 ntBASIC1.61□□□□□ -2.15
NEK3P51956 MTCYBP9-201ENST00000431021 303 ntBASIC1.61□□□□□ -2.15
NEK3P51956 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.61□□□□□ -2.15
NEK3P51956 RNU6-165P-201ENST00000517170 99 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 208.7 ms