Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 Y_RNA.651-201ENST00000459380 103 ntBASIC2.26□□□□□ -2.05
CLK3P49761 RNA5SP320-201ENST00000516263 124 ntBASIC2.26□□□□□ -2.05
CLK3P49761 RNU6-856P-201ENST00000516959 98 ntBASIC2.26□□□□□ -2.05
CLK3P49761 AC022202.1-201ENST00000613515 211 ntBASIC2.26□□□□□ -2.05
CLK3P49761 U2.20-201ENST00000613956 192 ntBASIC2.26□□□□□ -2.05
CLK3P49761 AL121890.5-201ENST00000620848 304 ntBASIC2.26□□□□□ -2.05
CLK3P49761 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.26□□□□□ -2.05
CLK3P49761 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.26□□□□□ -2.05
CLK3P49761 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.26□□□□□ -2.05
CLK3P49761 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CLK3P49761 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CLK3P49761 ZNF720P1-201ENST00000562403 1939 ntBASIC2.25□□□□□ -2.05
CLK3P49761 Y_RNA.35-201ENST00000362601 101 ntBASIC2.25□□□□□ -2.05
CLK3P49761 RNU6-1164P-201ENST00000364428 107 ntBASIC2.25□□□□□ -2.05
CLK3P49761 Y_RNA.332-201ENST00000365271 113 ntBASIC2.25□□□□□ -2.05
CLK3P49761 RNU6-880P-201ENST00000384526 107 ntBASIC2.25□□□□□ -2.05
CLK3P49761 RNU11-5P-201ENST00000391216 129 ntBASIC2.25□□□□□ -2.05
CLK3P49761 AL359511.1-201ENST00000402970 211 ntBASIC2.25□□□□□ -2.05
CLK3P49761 MIR1253-201ENST00000408273 105 ntBASIC2.25□□□□□ -2.05
CLK3P49761 AC018634.1-201ENST00000437554 401 ntBASIC2.25□□□□□ -2.05
CLK3P49761 RNU6-781P-201ENST00000516377 101 ntBASIC2.25□□□□□ -2.05
CLK3P49761 RNU6-504P-201ENST00000516568 104 ntBASIC2.25□□□□□ -2.05
CLK3P49761 RNA5SP137-201ENST00000516833 135 ntBASIC2.25□□□□□ -2.05
CLK3P49761 RNU6-1096P-201ENST00000517089 102 ntBASIC2.25□□□□□ -2.05
CLK3P49761 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.25□□□□□ -2.05
CLK3P49761 AC007751.1-201ENST00000529260 376 ntBASIC2.25□□□□□ -2.05
CLK3P49761 AL022345.2-201ENST00000606307 135 ntBASIC2.25□□□□□ -2.05
CLK3P49761 CTSLP2-204ENST00000629029 392 ntBASIC2.25□□□□□ -2.05
CLK3P49761 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CLK3P49761 Y_RNA.99-201ENST00000363138 105 ntBASIC2.24□□□□□ -2.05
CLK3P49761 RNU6-508P-201ENST00000363231 103 ntBASIC2.24□□□□□ -2.05
CLK3P49761 SNORA3A-201ENST00000364113 130 ntBASIC2.24□□□□□ -2.05
CLK3P49761 RNU1-96P-201ENST00000364163 162 ntBASIC2.24□□□□□ -2.05
CLK3P49761 SNORA6-201ENST00000384033 151 ntBASIC2.24□□□□□ -2.05
CLK3P49761 MIR1262-201ENST00000408276 93 ntBASIC2.24□□□□□ -2.05
CLK3P49761 AF228730.3-201ENST00000436691 102 ntBASIC2.24□□□□□ -2.05
CLK3P49761 AL513328.1-201ENST00000446460 224 ntBASIC2.24□□□□□ -2.05
CLK3P49761 RNU6-168P-201ENST00000516189 101 ntBASIC2.24□□□□□ -2.05
CLK3P49761 AC025166.1-201ENST00000612411 163 ntBASIC2.24□□□□□ -2.05
CLK3P49761 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
CLK3P49761 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.23□□□□□ -2.05
CLK3P49761 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
CLK3P49761 RNU6-1292P-201ENST00000383856 107 ntBASIC2.23□□□□□ -2.05
CLK3P49761 RNA5SP89-201ENST00000410300 108 ntBASIC2.23□□□□□ -2.05
CLK3P49761 RN7SKP284-201ENST00000411002 343 ntBASIC2.23□□□□□ -2.05
CLK3P49761 RNA5SP270-201ENST00000411361 118 ntBASIC2.23□□□□□ -2.05
CLK3P49761 HMGN2P38-201ENST00000423806 265 ntBASIC2.23□□□□□ -2.05
CLK3P49761 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.23□□□□□ -2.05
CLK3P49761 Y_RNA.649-201ENST00000459077 103 ntBASIC2.23□□□□□ -2.05
CLK3P49761 NDUFA4P2-201ENST00000489989 244 ntBASIC2.23□□□□□ -2.05
CLK3P49761 RNU6-1146P-201ENST00000516282 102 ntBASIC2.23□□□□□ -2.05
CLK3P49761 AL021397.1-201ENST00000451806 248 ntBASIC2.22□□□□□ -2.05
CLK3P49761 HMGN1P7-201ENST00000491722 313 ntBASIC2.22□□□□□ -2.05
CLK3P49761 AC090255.1-201ENST00000495779 349 ntBASIC2.22□□□□□ -2.05
CLK3P49761 RNU7-99P-201ENST00000516271 62 ntBASIC2.22□□□□□ -2.05
CLK3P49761 MIR3129-201ENST00000581095 76 ntBASIC2.22□□□□□ -2.05
CLK3P49761 AC073413.2-201ENST00000604332 360 ntBASIC2.22□□□□□ -2.05
CLK3P49761 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CLK3P49761 MTND5P18-201ENST00000445624 1801 ntBASIC2.21□□□□□ -2.05
CLK3P49761 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.21□□□□□ -2.05
CLK3P49761 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.21□□□□□ -2.06
CLK3P49761 MIR340-201ENST00000362125 95 ntBASIC2.21□□□□□ -2.06
CLK3P49761 SNORD115-3-201ENST00000363100 82 ntBASIC2.21□□□□□ -2.06
CLK3P49761 Y_RNA.242-201ENST00000364473 110 ntBASIC2.21□□□□□ -2.06
CLK3P49761 SNORD24-201ENST00000383884 75 ntBASIC2.21□□□□□ -2.06
CLK3P49761 SNORA1-201ENST00000384107 130 ntBASIC2.21□□□□□ -2.06
CLK3P49761 MIR548A1-201ENST00000385041 97 ntBASIC2.21□□□□□ -2.06
CLK3P49761 MIR29C-201ENST00000385231 88 ntBASIC2.21□□□□□ -2.06
CLK3P49761 Y_RNA.621-201ENST00000411065 96 ntBASIC2.21□□□□□ -2.06
CLK3P49761 AC060773.1-201ENST00000421698 310 ntBASIC2.21□□□□□ -2.06
CLK3P49761 RPS15AP28-201ENST00000435088 386 ntBASIC2.21□□□□□ -2.06
CLK3P49761 HMGN2P34-201ENST00000437647 269 ntBASIC2.21□□□□□ -2.06
CLK3P49761 MRPS17P9-201ENST00000511924 393 ntBASIC2.21□□□□□ -2.06
CLK3P49761 RNA5SP236-201ENST00000516169 116 ntBASIC2.21□□□□□ -2.06
CLK3P49761 Y_RNA.694-201ENST00000516677 117 ntBASIC2.21□□□□□ -2.06
CLK3P49761 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.21□□□□□ -2.06
CLK3P49761 AC007229.1-201ENST00000590455 412 ntBASIC2.21□□□□□ -2.06
CLK3P49761 AC008555.8-201ENST00000623602 2168 ntBASIC2.21□□□□□ -2.06
CLK3P49761 MIR1291-201ENST00000627649 87 ntBASIC2.21□□□□□ -2.06
CLK3P49761 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.21□□□□□ -2.06
CLK3P49761 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CLK3P49761 AL596028.1-201ENST00000326971 197 ntBASIC2.2□□□□□ -2.06
CLK3P49761 snoU2-30.2-201ENST00000362805 70 ntBASIC2.2□□□□□ -2.06
CLK3P49761 RNU6-888P-201ENST00000363010 101 ntBASIC2.2□□□□□ -2.06
CLK3P49761 RNU4-52P-201ENST00000384209 138 ntBASIC2.2□□□□□ -2.06
CLK3P49761 RNU6-301P-201ENST00000384277 107 ntBASIC2.2□□□□□ -2.06
CLK3P49761 RNU6-160P-201ENST00000384591 107 ntBASIC2.2□□□□□ -2.06
CLK3P49761 SNRPGP10-201ENST00000432323 225 ntBASIC2.2□□□□□ -2.06
CLK3P49761 AC026436.1-201ENST00000510537 270 ntBASIC2.2□□□□□ -2.06
CLK3P49761 SNORA72.7-201ENST00000516349 94 ntBASIC2.2□□□□□ -2.06
CLK3P49761 RNU6-113P-201ENST00000516653 101 ntBASIC2.2□□□□□ -2.06
CLK3P49761 AC087685.1-201ENST00000587507 141 ntBASIC2.2□□□□□ -2.06
CLK3P49761 AC067747.1-201ENST00000608026 250 ntBASIC2.2□□□□□ -2.06
CLK3P49761 MIR4679-1-201ENST00000637619 75 ntBASIC2.2□□□□□ -2.06
CLK3P49761 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.2□□□□□ -2.06
CLK3P49761 AP000553.5-201ENST00000641933 54 ntBASIC2.2□□□□□ -2.06
CLK3P49761 AC018630.2-201ENST00000534866 2403 ntBASIC2.2□□□□□ -2.06
CLK3P49761 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CLK3P49761 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CLK3P49761 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 280.2 ms