Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC078880.5-201ENST00000617845 421 ntBASIC-1.07□□□□□ -2.58
HTTP42858 MIR8068-201ENST00000618032 68 ntBASIC-1.07□□□□□ -2.58
HTTP42858 RNU6-1266P-201ENST00000362794 105 ntBASIC-1.08□□□□□ -2.58
HTTP42858 SNORA2.1-201ENST00000363089 137 ntBASIC-1.08□□□□□ -2.58
HTTP42858 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.08□□□□□ -2.58
HTTP42858 RNA5SP245-201ENST00000364239 121 ntBASIC-1.08□□□□□ -2.58
HTTP42858 RNU6-312P-201ENST00000364629 107 ntBASIC-1.08□□□□□ -2.58
HTTP42858 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.08□□□□□ -2.58
HTTP42858 RNU6-354P-201ENST00000383862 107 ntBASIC-1.08□□□□□ -2.58
HTTP42858 RNU6-610P-201ENST00000384264 107 ntBASIC-1.08□□□□□ -2.58
HTTP42858 MTND1P32-201ENST00000433043 938 ntBASIC-1.08□□□□□ -2.58
HTTP42858 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-1.08□□□□□ -2.58
HTTP42858 AC104563.1-201ENST00000476147 376 ntBASIC-1.08□□□□□ -2.58
HTTP42858 MTND3P25-201ENST00000509243 135 ntBASIC-1.08□□□□□ -2.58
HTTP42858 RNU6-412P-201ENST00000516434 106 ntBASIC-1.08□□□□□ -2.58
HTTP42858 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
HTTP42858 MTATP6P2-201ENST00000603319 678 ntBASIC-1.08□□□□□ -2.58
HTTP42858 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-1.08□□□□□ -2.58
HTTP42858 MIR30D-201ENST00000362283 70 ntBASIC-1.08□□□□□ -2.58
HTTP42858 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.08□□□□□ -2.58
HTTP42858 SNORD50B-201ENST00000364995 70 ntBASIC-1.08□□□□□ -2.58
HTTP42858 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.08□□□□□ -2.58
HTTP42858 MTND1P27-201ENST00000451117 902 ntBASIC-1.08□□□□□ -2.58
HTTP42858 AC116353.2-201ENST00000505332 712 ntBASIC-1.08□□□□□ -2.58
HTTP42858 Y_RNA.665-201ENST00000516177 98 ntBASIC-1.08□□□□□ -2.58
HTTP42858 MIR4791-201ENST00000607666 84 ntBASIC-1.08□□□□□ -2.58
HTTP42858 AC087683.2-201ENST00000611384 326 ntBASIC-1.08□□□□□ -2.58
HTTP42858 MIR664B-201ENST00000626756 61 ntBASIC-1.08□□□□□ -2.58
HTTP42858 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.09□□□□□ -2.58
HTTP42858 SNORD115-35-201ENST00000365122 82 ntBASIC-1.09□□□□□ -2.58
HTTP42858 RNU6-891P-201ENST00000384280 111 ntBASIC-1.09□□□□□ -2.58
HTTP42858 SNORA49-201ENST00000386157 136 ntBASIC-1.09□□□□□ -2.58
HTTP42858 RNU2-10P-201ENST00000516375 211 ntBASIC-1.09□□□□□ -2.58
HTTP42858 RNU6-64P-201ENST00000517119 105 ntBASIC-1.09□□□□□ -2.58
HTTP42858 MTND3P13-201ENST00000574391 343 ntBASIC-1.09□□□□□ -2.58
HTTP42858 MIR548AC-201ENST00000585049 88 ntBASIC-1.09□□□□□ -2.58
HTTP42858 snoR1.1-201ENST00000628177 80 ntBASIC-1.09□□□□□ -2.58
HTTP42858 SNORD14E-201ENST00000364009 85 ntBASIC-1.09□□□□□ -2.58
HTTP42858 MIR29B1-201ENST00000385015 81 ntBASIC-1.09□□□□□ -2.58
HTTP42858 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.09□□□□□ -2.58
HTTP42858 RNU6-437P-201ENST00000459408 95 ntBASIC-1.09□□□□□ -2.58
HTTP42858 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.09□□□□□ -2.58
HTTP42858 RNU6-677P-201ENST00000516914 101 ntBASIC-1.09□□□□□ -2.58
HTTP42858 SNORD11B-201ENST00000607707 90 ntBASIC-1.09□□□□□ -2.58
HTTP42858 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.09□□□□□ -2.58
HTTP42858 MIR20A-201ENST00000362279 71 ntBASIC-1.09□□□□□ -2.58
HTTP42858 RNU6-511P-201ENST00000363496 107 ntBASIC-1.09□□□□□ -2.58
HTTP42858 SNORA72.3-201ENST00000365074 132 ntBASIC-1.09□□□□□ -2.58
HTTP42858 SNORA1.2-201ENST00000365189 134 ntBASIC-1.09□□□□□ -2.58
HTTP42858 RNU6-1005P-201ENST00000384519 107 ntBASIC-1.09□□□□□ -2.58
HTTP42858 AL353813.1-201ENST00000440700 253 ntBASIC-1.09□□□□□ -2.58
HTTP42858 FRG2DP-202ENST00000566967 323 ntBASIC-1.09□□□□□ -2.58
HTTP42858 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.1□□□□□ -2.59
HTTP42858 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.1□□□□□ -2.59
HTTP42858 RNU7-104P-201ENST00000459398 79 ntBASIC-1.1□□□□□ -2.59
HTTP42858 AL049829.1-201ENST00000465411 156 ntBASIC-1.1□□□□□ -2.59
HTTP42858 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.1□□□□□ -2.59
HTTP42858 U6.114-201ENST00000636407 96 ntBASIC-1.1□□□□□ -2.59
HTTP42858 RNU4-92P-201ENST00000363783 136 ntBASIC-1.1□□□□□ -2.59
HTTP42858 RNU6-973P-201ENST00000364690 107 ntBASIC-1.1□□□□□ -2.59
HTTP42858 RNA5SP20-201ENST00000515976 84 ntBASIC-1.1□□□□□ -2.59
HTTP42858 RNA5SP272-201ENST00000516095 111 ntBASIC-1.1□□□□□ -2.59
HTTP42858 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.1□□□□□ -2.59
HTTP42858 ADI1P3-201ENST00000549509 470 ntBASIC-1.1□□□□□ -2.59
HTTP42858 RNU6-609P-201ENST00000365459 107 ntBASIC-1.11□□□□□ -2.59
HTTP42858 RNU6-949P-201ENST00000384040 107 ntBASIC-1.11□□□□□ -2.59
HTTP42858 RNU6-692P-201ENST00000384496 107 ntBASIC-1.11□□□□□ -2.59
HTTP42858 RNU4-55P-201ENST00000410731 137 ntBASIC-1.11□□□□□ -2.59
HTTP42858 RPL30P16-201ENST00000419341 429 ntBASIC-1.11□□□□□ -2.59
HTTP42858 MRPS10P1-201ENST00000448483 130 ntBASIC-1.11□□□□□ -2.59
HTTP42858 SNORD63.1-201ENST00000516178 80 ntBASIC-1.11□□□□□ -2.59
HTTP42858 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.11□□□□□ -2.59
HTTP42858 AC109479.2-201ENST00000517842 174 ntBASIC-1.11□□□□□ -2.59
HTTP42858 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-1.11□□□□□ -2.59
HTTP42858 AC005776.1-201ENST00000603164 290 ntBASIC-1.11□□□□□ -2.59
HTTP42858 AC006435.5-201ENST00000624486 112 ntBASIC-1.11□□□□□ -2.59
HTTP42858 RNU6-289P-201ENST00000364093 107 ntBASIC-1.11□□□□□ -2.59
HTTP42858 RNU6-154P-201ENST00000384306 106 ntBASIC-1.11□□□□□ -2.59
HTTP42858 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.11□□□□□ -2.59
HTTP42858 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.11□□□□□ -2.59
HTTP42858 RNU2-62P-201ENST00000410868 191 ntBASIC-1.11□□□□□ -2.59
HTTP42858 MTATP6P14-201ENST00000455189 673 ntBASIC-1.11□□□□□ -2.59
HTTP42858 RNU7-136P-201ENST00000458819 69 ntBASIC-1.11□□□□□ -2.59
HTTP42858 AC104576.1-201ENST00000524225 88 ntBASIC-1.11□□□□□ -2.59
HTTP42858 AC127455.1-201ENST00000565496 145 ntBASIC-1.11□□□□□ -2.59
HTTP42858 AP001836.1-201ENST00000604675 523 ntBASIC-1.11□□□□□ -2.59
HTTP42858 AL121655.1-201ENST00000605811 308 ntBASIC-1.11□□□□□ -2.59
HTTP42858 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.11□□□□□ -2.59
HTTP42858 AC011603.4-201ENST00000611325 277 ntBASIC-1.11□□□□□ -2.59
HTTP42858 AL163152.1-201ENST00000642001 374 ntBASIC-1.11□□□□□ -2.59
HTTP42858 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.11□□□□□ -2.59
HTTP42858 SNORA69-201ENST00000383895 132 ntBASIC-1.11□□□□□ -2.59
HTTP42858 RNU6-847P-201ENST00000411115 108 ntBASIC-1.11□□□□□ -2.59
HTTP42858 HMGN2P32-201ENST00000444648 269 ntBASIC-1.11□□□□□ -2.59
HTTP42858 AC114982.2-201ENST00000461396 358 ntBASIC-1.11□□□□□ -2.59
HTTP42858 AC119751.4-201ENST00000507498 357 ntBASIC-1.11□□□□□ -2.59
HTTP42858 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.11□□□□□ -2.59
HTTP42858 MTND1P5-201ENST00000517906 940 ntBASIC-1.11□□□□□ -2.59
HTTP42858 MIR3139-201ENST00000579145 76 ntBASIC-1.11□□□□□ -2.59
HTTP42858 MIR3146-201ENST00000580367 79 ntBASIC-1.11□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms