Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 Y_RNA.446-201ENST00000384178 104 ntBASIC0.33□□□□□ -2.36
BRCA1P38398 RNU6-1199P-201ENST00000411249 104 ntBASIC0.33□□□□□ -2.36
BRCA1P38398 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.33□□□□□ -2.36
BRCA1P38398 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.33□□□□□ -2.36
BRCA1P38398 Y_RNA.708-201ENST00000516950 96 ntBASIC0.33□□□□□ -2.36
BRCA1P38398 AC002553.4-201ENST00000616896 331 ntBASIC0.33□□□□□ -2.36
BRCA1P38398 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.33□□□□□ -2.36
BRCA1P38398 RNU6-626P-201ENST00000363354 107 ntBASIC0.32□□□□□ -2.36
BRCA1P38398 RNU6-831P-201ENST00000384548 107 ntBASIC0.32□□□□□ -2.36
BRCA1P38398 MIR522-201ENST00000385071 87 ntBASIC0.32□□□□□ -2.36
BRCA1P38398 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.32□□□□□ -2.36
BRCA1P38398 MTND5P5-201ENST00000503764 376 ntBASIC0.32□□□□□ -2.36
BRCA1P38398 AC144568.1-201ENST00000520139 137 ntBASIC0.32□□□□□ -2.36
BRCA1P38398 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.32□□□□□ -2.36
BRCA1P38398 MIR5190-201ENST00000581537 80 ntBASIC0.32□□□□□ -2.36
BRCA1P38398 MIR548F5-201ENST00000408421 86 ntBASIC0.31□□□□□ -2.36
BRCA1P38398 RNU6-613P-201ENST00000410412 108 ntBASIC0.31□□□□□ -2.36
BRCA1P38398 RNU6-994P-201ENST00000410507 111 ntBASIC0.31□□□□□ -2.36
BRCA1P38398 RNU7-169P-201ENST00000459456 61 ntBASIC0.31□□□□□ -2.36
BRCA1P38398 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.31□□□□□ -2.36
BRCA1P38398 RNU6-718P-201ENST00000516166 105 ntBASIC0.31□□□□□ -2.36
BRCA1P38398 AC131055.1-201ENST00000584626 316 ntBASIC0.31□□□□□ -2.36
BRCA1P38398 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.31□□□□□ -2.36
BRCA1P38398 AC134026.1-201ENST00000623249 2239 ntBASIC0.31□□□□□ -2.36
BRCA1P38398 Y_RNA.27-201ENST00000362540 103 ntBASIC0.31□□□□□ -2.36
BRCA1P38398 SNORD18A-201ENST00000363753 72 ntBASIC0.31□□□□□ -2.36
BRCA1P38398 RNU6-1327P-201ENST00000365302 105 ntBASIC0.31□□□□□ -2.36
BRCA1P38398 Y_RNA.341-201ENST00000365341 102 ntBASIC0.31□□□□□ -2.36
BRCA1P38398 SNORA36.2-201ENST00000384004 127 ntBASIC0.31□□□□□ -2.36
BRCA1P38398 Y_RNA.456-201ENST00000384232 111 ntBASIC0.31□□□□□ -2.36
BRCA1P38398 RNU6-470P-201ENST00000515954 104 ntBASIC0.31□□□□□ -2.36
BRCA1P38398 SNORD45.4-201ENST00000516629 73 ntBASIC0.31□□□□□ -2.36
BRCA1P38398 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.31□□□□□ -2.36
BRCA1P38398 AC113139.1-201ENST00000605049 239 ntBASIC0.31□□□□□ -2.36
BRCA1P38398 RNU6-801P-201ENST00000364087 105 ntBASIC0.3□□□□□ -2.36
BRCA1P38398 RNU6-654P-201ENST00000364373 107 ntBASIC0.3□□□□□ -2.36
BRCA1P38398 RNU6-580P-201ENST00000365159 107 ntBASIC0.3□□□□□ -2.36
BRCA1P38398 MIR570-201ENST00000384917 97 ntBASIC0.3□□□□□ -2.36
BRCA1P38398 MIR15B-201ENST00000385045 98 ntBASIC0.3□□□□□ -2.36
BRCA1P38398 U8.17-201ENST00000391292 132 ntBASIC0.3□□□□□ -2.36
BRCA1P38398 MIR873-201ENST00000401120 77 ntBASIC0.3□□□□□ -2.36
BRCA1P38398 MIR548K-201ENST00000408406 116 ntBASIC0.3□□□□□ -2.36
BRCA1P38398 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.3□□□□□ -2.36
BRCA1P38398 TRBVB-201ENST00000477100 408 ntBASIC0.3□□□□□ -2.36
BRCA1P38398 PRDX4P1-201ENST00000507189 574 ntBASIC0.3□□□□□ -2.36
BRCA1P38398 RNU6-1170P-201ENST00000515974 106 ntBASIC0.3□□□□□ -2.36
BRCA1P38398 RN7SKP164-201ENST00000516138 266 ntBASIC0.3□□□□□ -2.36
BRCA1P38398 RNU6-358P-201ENST00000516564 75 ntBASIC0.3□□□□□ -2.36
BRCA1P38398 RNU4-77P-201ENST00000516692 156 ntBASIC0.3□□□□□ -2.36
BRCA1P38398 RNU6-264P-201ENST00000517134 104 ntBASIC0.3□□□□□ -2.36
BRCA1P38398 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.3□□□□□ -2.36
BRCA1P38398 MIR4264-201ENST00000583520 66 ntBASIC0.3□□□□□ -2.36
BRCA1P38398 Y_RNA.329-201ENST00000365209 107 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 SNORA72-201ENST00000384339 132 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 Y_RNA.573-201ENST00000384763 105 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
BRCA1P38398 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.29□□□□□ -2.36
BRCA1P38398 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.29□□□□□ -2.36
BRCA1P38398 AC069439.1-201ENST00000494739 167 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 MIR5701-3-201ENST00000578890 82 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 MIR5701-1-201ENST00000585138 82 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 AC012433.1-201ENST00000588916 398 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 AC060780.3-201ENST00000589464 80 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 RBM11P1-201ENST00000604951 799 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 AC090517.2-201ENST00000614966 680 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 MIR5701-2-201ENST00000615634 82 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 Y_RNA.3-201ENST00000362331 103 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 RNU6-623P-201ENST00000363143 105 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 Y_RNA.310-201ENST00000365063 113 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 RNU6-934P-201ENST00000365154 107 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 SNORA1.2-201ENST00000365189 134 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 RNU6-364P-201ENST00000384387 107 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 Y_RNA.516-201ENST00000384541 124 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 MIR520F-201ENST00000384824 87 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 SNORD115-47-201ENST00000391226 86 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 MTCO2P33-201ENST00000402100 465 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 MIR1277-201ENST00000408536 78 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 RNA5SP222-201ENST00000411039 105 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 RNU2-61P-201ENST00000411069 191 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.29□□□□□ -2.36
BRCA1P38398 RNU7-56P-201ENST00000458744 62 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 RNU7-116P-201ENST00000516940 62 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 AP000753.3-201ENST00000604083 169 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 MIR4251-201ENST00000635819 61 ntBASIC0.29□□□□□ -2.36
BRCA1P38398 Y_RNA.314-201ENST00000365114 102 ntBASIC0.28□□□□□ -2.36
BRCA1P38398 Y_RNA.482-201ENST00000384377 111 ntBASIC0.28□□□□□ -2.36
BRCA1P38398 MIR520H-201ENST00000385126 88 ntBASIC0.28□□□□□ -2.36
BRCA1P38398 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.28□□□□□ -2.36
BRCA1P38398 AC016907.1-201ENST00000419483 435 ntBASIC0.28□□□□□ -2.36
BRCA1P38398 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.28□□□□□ -2.36
BRCA1P38398 AC091951.2-201ENST00000500762 203 ntBASIC0.28□□□□□ -2.36
BRCA1P38398 RNU7-181P-201ENST00000517234 74 ntBASIC0.28□□□□□ -2.36
BRCA1P38398 uc_338.4-201ENST00000616635 176 ntBASIC0.28□□□□□ -2.36
BRCA1P38398 RNU4-14P-201ENST00000410858 122 ntBASIC0.27□□□□□ -2.37
BRCA1P38398 AC005042.3-201ENST00000453230 174 ntBASIC0.27□□□□□ -2.37
BRCA1P38398 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.27□□□□□ -2.37
BRCA1P38398 SNORA25.12-201ENST00000516202 82 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms