Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC074085.1-201ENST00000413598 418 ntBASIC-0.13□□□□□ -2.43
RPA3P35244 RNU7-102P-201ENST00000458948 62 ntBASIC-0.13□□□□□ -2.43
RPA3P35244 AC091959.1-201ENST00000495857 238 ntBASIC-0.13□□□□□ -2.43
RPA3P35244 AC026782.1-201ENST00000512952 449 ntBASIC-0.13□□□□□ -2.43
RPA3P35244 SNORA18.4-201ENST00000516440 124 ntBASIC-0.13□□□□□ -2.43
RPA3P35244 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.13□□□□□ -2.43
RPA3P35244 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.13□□□□□ -2.43
RPA3P35244 MTND3P12-201ENST00000559068 328 ntBASIC-0.13□□□□□ -2.43
RPA3P35244 RPL23AP91-201ENST00000569211 455 ntBASIC-0.13□□□□□ -2.43
RPA3P35244 MIR3974-201ENST00000637126 96 ntBASIC-0.13□□□□□ -2.43
RPA3P35244 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.14□□□□□ -2.43
RPA3P35244 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.14□□□□□ -2.43
RPA3P35244 SNORD114-5-201ENST00000362928 70 ntBASIC-0.14□□□□□ -2.43
RPA3P35244 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.14□□□□□ -2.43
RPA3P35244 RNU6-364P-201ENST00000384387 107 ntBASIC-0.14□□□□□ -2.43
RPA3P35244 RNU6-847P-201ENST00000411115 108 ntBASIC-0.14□□□□□ -2.43
RPA3P35244 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.14□□□□□ -2.43
RPA3P35244 SCARNA8-201ENST00000515924 131 ntBASIC-0.14□□□□□ -2.43
RPA3P35244 RNU6-436P-201ENST00000516171 114 ntBASIC-0.14□□□□□ -2.43
RPA3P35244 RNA5SP227-201ENST00000516184 113 ntBASIC-0.14□□□□□ -2.43
RPA3P35244 MIR4790-201ENST00000577799 79 ntBASIC-0.14□□□□□ -2.43
RPA3P35244 MIR6779-201ENST00000617283 64 ntBASIC-0.14□□□□□ -2.43
RPA3P35244 AC098679.4-201ENST00000624241 654 ntBASIC-0.14□□□□□ -2.43
RPA3P35244 AC010332.2-201ENST00000613083 1904 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 SNORA1.2-201ENST00000365189 134 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 RNU6-747P-201ENST00000390928 104 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 RNU6-241P-201ENST00000391148 104 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 RNU6-447P-201ENST00000410293 104 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 Y_RNA.594-201ENST00000410373 140 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 RNU6-855P-201ENST00000410395 104 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 RNU6-355P-201ENST00000410427 104 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 RNU6-791P-201ENST00000410467 104 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 RNU6-705P-201ENST00000410601 104 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 RNU6-860P-201ENST00000410860 104 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 RNU6-785P-201ENST00000411324 104 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 MTND3P21-201ENST00000433774 331 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.15□□□□□ -2.43
RPA3P35244 RPL23AP54-201ENST00000495129 419 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 RNU2-13P-201ENST00000515909 113 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 RNU6-155P-201ENST00000516347 100 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 RNU6-966P-201ENST00000516479 104 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 AC087685.1-201ENST00000587507 141 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 MIR1244-1-201ENST00000612829 85 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 U6.90-201ENST00000614007 104 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 JPX_2.1-201ENST00000614161 69 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 U6.70-201ENST00000620287 104 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 MIR1244-3-201ENST00000635744 85 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 MIR1244-2-201ENST00000636449 85 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 MIR1244-4-202ENST00000636813 85 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 MIR371B-201ENST00000638082 66 ntBASIC-0.15□□□□□ -2.43
RPA3P35244 SNORA36.1-201ENST00000363424 132 ntBASIC-0.16□□□□□ -2.44
RPA3P35244 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.16□□□□□ -2.44
RPA3P35244 RNA5SP117-201ENST00000365294 118 ntBASIC-0.16□□□□□ -2.44
RPA3P35244 MIR125B2-201ENST00000385128 89 ntBASIC-0.16□□□□□ -2.44
RPA3P35244 RNU2-59P-201ENST00000410482 191 ntBASIC-0.16□□□□□ -2.44
RPA3P35244 RNU6-373P-201ENST00000411247 98 ntBASIC-0.16□□□□□ -2.44
RPA3P35244 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.16□□□□□ -2.44
RPA3P35244 AC133485.4-201ENST00000561835 220 ntBASIC-0.16□□□□□ -2.44
RPA3P35244 AC060780.3-201ENST00000589464 80 ntBASIC-0.16□□□□□ -2.44
RPA3P35244 MIR6740-201ENST00000618268 113 ntBASIC-0.16□□□□□ -2.44
RPA3P35244 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.17□□□□□ -2.44
RPA3P35244 Y_RNA.301-201ENST00000364990 103 ntBASIC-0.17□□□□□ -2.44
RPA3P35244 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.17□□□□□ -2.44
RPA3P35244 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.17□□□□□ -2.44
RPA3P35244 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.17□□□□□ -2.44
RPA3P35244 MTND2P22-201ENST00000444325 1033 ntBASIC-0.17□□□□□ -2.44
RPA3P35244 MTND5P5-201ENST00000503764 376 ntBASIC-0.17□□□□□ -2.44
RPA3P35244 MIR4290-201ENST00000583807 95 ntBASIC-0.17□□□□□ -2.44
RPA3P35244 POLR3GP1-201ENST00000594073 261 ntBASIC-0.17□□□□□ -2.44
RPA3P35244 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.18□□□□□ -2.44
RPA3P35244 RPL30P15-201ENST00000457129 321 ntBASIC-0.18□□□□□ -2.44
RPA3P35244 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.18□□□□□ -2.44
RPA3P35244 RNU7-156P-201ENST00000517214 74 ntBASIC-0.18□□□□□ -2.44
RPA3P35244 AC005176.2-201ENST00000596933 147 ntBASIC-0.18□□□□□ -2.44
RPA3P35244 MIR2909-201ENST00000617113 69 ntBASIC-0.18□□□□□ -2.44
RPA3P35244 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.18□□□□□ -2.44
RPA3P35244 SNORA9.1-201ENST00000362412 131 ntBASIC-0.19□□□□□ -2.44
RPA3P35244 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.19□□□□□ -2.44
RPA3P35244 RNU6-601P-201ENST00000384540 107 ntBASIC-0.19□□□□□ -2.44
RPA3P35244 PCNPP3-201ENST00000393579 471 ntBASIC-0.19□□□□□ -2.44
RPA3P35244 AC009161.1-201ENST00000417306 376 ntBASIC-0.19□□□□□ -2.44
RPA3P35244 MIR18B-201ENST00000454574 71 ntBASIC-0.19□□□□□ -2.44
RPA3P35244 RNU7-185P-201ENST00000459215 60 ntBASIC-0.19□□□□□ -2.44
RPA3P35244 Y_RNA.682-201ENST00000516457 100 ntBASIC-0.19□□□□□ -2.44
RPA3P35244 MIR2355-201ENST00000517199 87 ntBASIC-0.19□□□□□ -2.44
RPA3P35244 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.19□□□□□ -2.44
RPA3P35244 SNORD92-201ENST00000585078 85 ntBASIC-0.19□□□□□ -2.44
RPA3P35244 AC008507.4-201ENST00000585464 127 ntBASIC-0.19□□□□□ -2.44
RPA3P35244 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.2□□□□□ -2.44
RPA3P35244 RNU6-20P-201ENST00000384106 107 ntBASIC-0.2□□□□□ -2.44
RPA3P35244 SNORD72-201ENST00000390994 80 ntBASIC-0.2□□□□□ -2.44
RPA3P35244 AC236972.2-201ENST00000434979 310 ntBASIC-0.2□□□□□ -2.44
RPA3P35244 MTND1P1-201ENST00000445453 368 ntBASIC-0.2□□□□□ -2.44
RPA3P35244 MIR2053-201ENST00000459295 91 ntBASIC-0.2□□□□□ -2.44
RPA3P35244 RPL7P42-201ENST00000481005 679 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms