Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 SNRPGP13-201ENST00000442212 177 ntBASIC2.47□□□□□ -2.01
HOXC12P31275 SNORA9.3-201ENST00000516383 129 ntBASIC2.47□□□□□ -2.01
HOXC12P31275 IGLV3-17-201ENST00000519099 244 ntBASIC2.47□□□□□ -2.01
HOXC12P31275 ZNF861P-201ENST00000588126 639 ntBASIC2.47□□□□□ -2.01
HOXC12P31275 AC078899.2-201ENST00000595282 212 ntBASIC2.47□□□□□ -2.01
HOXC12P31275 AL365222.1-201ENST00000614661 98 ntBASIC2.47□□□□□ -2.01
HOXC12P31275 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.01
HOXC12P31275 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HOXC12P31275 U8.1-201ENST00000362843 134 ntBASIC2.46□□□□□ -2.02
HOXC12P31275 SNORD18B-201ENST00000365659 72 ntBASIC2.46□□□□□ -2.02
HOXC12P31275 SNORA80E-201ENST00000384744 137 ntBASIC2.46□□□□□ -2.02
HOXC12P31275 MIR520A-201ENST00000384862 85 ntBASIC2.46□□□□□ -2.02
HOXC12P31275 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
HOXC12P31275 RNU6-1154P-201ENST00000391001 104 ntBASIC2.46□□□□□ -2.02
HOXC12P31275 SNORD23.1-201ENST00000408212 104 ntBASIC2.46□□□□□ -2.02
HOXC12P31275 RNU2-52P-201ENST00000410680 190 ntBASIC2.46□□□□□ -2.02
HOXC12P31275 RNA5SP127-201ENST00000411051 133 ntBASIC2.46□□□□□ -2.02
HOXC12P31275 AL158823.1-201ENST00000418441 478 ntBASIC2.46□□□□□ -2.02
HOXC12P31275 HSPE1P9-201ENST00000440046 311 ntBASIC2.46□□□□□ -2.02
HOXC12P31275 AL513328.1-201ENST00000446460 224 ntBASIC2.46□□□□□ -2.02
HOXC12P31275 AC079600.2-201ENST00000550076 130 ntBASIC2.46□□□□□ -2.02
HOXC12P31275 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.46□□□□□ -2.02
HOXC12P31275 MIR7843-201ENST00000622274 79 ntBASIC2.46□□□□□ -2.02
HOXC12P31275 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
HOXC12P31275 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HOXC12P31275 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
HOXC12P31275 RNU6-888P-201ENST00000363010 101 ntBASIC2.45□□□□□ -2.02
HOXC12P31275 SNORA63D-201ENST00000364359 132 ntBASIC2.45□□□□□ -2.02
HOXC12P31275 SNORA4.2-201ENST00000365313 147 ntBASIC2.45□□□□□ -2.02
HOXC12P31275 RNU6-950P-201ENST00000384651 107 ntBASIC2.45□□□□□ -2.02
HOXC12P31275 RNU2-51P-201ENST00000410708 197 ntBASIC2.45□□□□□ -2.02
HOXC12P31275 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.45□□□□□ -2.02
HOXC12P31275 AP004217.1-201ENST00000480579 346 ntBASIC2.45□□□□□ -2.02
HOXC12P31275 RNU6-313P-201ENST00000516317 112 ntBASIC2.45□□□□□ -2.02
HOXC12P31275 RNU6-479P-201ENST00000516348 105 ntBASIC2.45□□□□□ -2.02
HOXC12P31275 RNU6-1234P-201ENST00000516877 103 ntBASIC2.45□□□□□ -2.02
HOXC12P31275 RNU6-1116P-201ENST00000517269 99 ntBASIC2.45□□□□□ -2.02
HOXC12P31275 AC004486.1-201ENST00000546846 233 ntBASIC2.45□□□□□ -2.02
HOXC12P31275 SUB1P4-201ENST00000566062 339 ntBASIC2.45□□□□□ -2.02
HOXC12P31275 AL365205.2-201ENST00000594586 68 ntBASIC2.45□□□□□ -2.02
HOXC12P31275 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.45□□□□□ -2.02
HOXC12P31275 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HOXC12P31275 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
HOXC12P31275 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.44□□□□□ -2.02
HOXC12P31275 Y_RNA.71-201ENST00000362892 104 ntBASIC2.44□□□□□ -2.02
HOXC12P31275 Y_RNA.218-201ENST00000364218 104 ntBASIC2.44□□□□□ -2.02
HOXC12P31275 RNU1-51P-201ENST00000365345 176 ntBASIC2.44□□□□□ -2.02
HOXC12P31275 RNU6-163P-201ENST00000384396 106 ntBASIC2.44□□□□□ -2.02
HOXC12P31275 MIR504-201ENST00000385065 83 ntBASIC2.44□□□□□ -2.02
HOXC12P31275 MIR624-201ENST00000385217 97 ntBASIC2.44□□□□□ -2.02
HOXC12P31275 AL034345.1-201ENST00000407768 123 ntBASIC2.44□□□□□ -2.02
HOXC12P31275 AC114811.1-201ENST00000507207 168 ntBASIC2.44□□□□□ -2.02
HOXC12P31275 RNU7-193P-201ENST00000516723 65 ntBASIC2.44□□□□□ -2.02
HOXC12P31275 SNORA31.25-201ENST00000517242 134 ntBASIC2.44□□□□□ -2.02
HOXC12P31275 MIR5694-201ENST00000581190 76 ntBASIC2.44□□□□□ -2.02
HOXC12P31275 U7.2-201ENST00000607576 63 ntBASIC2.44□□□□□ -2.02
HOXC12P31275 U1.36-201ENST00000620684 176 ntBASIC2.44□□□□□ -2.02
HOXC12P31275 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HOXC12P31275 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.44□□□□□ -2.02
HOXC12P31275 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.44□□□□□ -2.02
HOXC12P31275 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.43□□□□□ -2.02
HOXC12P31275 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
HOXC12P31275 RNU6-268P-201ENST00000364174 107 ntBASIC2.43□□□□□ -2.02
HOXC12P31275 Y_RNA.336-201ENST00000365307 109 ntBASIC2.43□□□□□ -2.02
HOXC12P31275 MIR9-1-201ENST00000385198 89 ntBASIC2.43□□□□□ -2.02
HOXC12P31275 RNU6-1168P-201ENST00000390831 104 ntBASIC2.43□□□□□ -2.02
HOXC12P31275 MIR548O-201ENST00000408583 114 ntBASIC2.43□□□□□ -2.02
HOXC12P31275 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.43□□□□□ -2.02
HOXC12P31275 AC008267.6-201ENST00000441664 139 ntBASIC2.43□□□□□ -2.02
HOXC12P31275 RPL23AP63-201ENST00000498752 471 ntBASIC2.43□□□□□ -2.02
HOXC12P31275 Y_RNA.686-201ENST00000516548 134 ntBASIC2.43□□□□□ -2.02
HOXC12P31275 MIR4529-201ENST00000578110 78 ntBASIC2.43□□□□□ -2.02
HOXC12P31275 MIR6840-201ENST00000611937 71 ntBASIC2.43□□□□□ -2.02
HOXC12P31275 AC006441.5-201ENST00000612680 209 ntBASIC2.43□□□□□ -2.02
HOXC12P31275 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HOXC12P31275 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
HOXC12P31275 RNU6-859P-201ENST00000362728 107 ntBASIC2.42□□□□□ -2.02
HOXC12P31275 Y_RNA.120-201ENST00000363304 110 ntBASIC2.42□□□□□ -2.02
HOXC12P31275 RNU6-112P-201ENST00000363599 104 ntBASIC2.42□□□□□ -2.02
HOXC12P31275 SNORA22C-201ENST00000384614 134 ntBASIC2.42□□□□□ -2.02
HOXC12P31275 MIR548A2-201ENST00000384956 97 ntBASIC2.42□□□□□ -2.02
HOXC12P31275 AL138827.1-201ENST00000402666 306 ntBASIC2.42□□□□□ -2.02
HOXC12P31275 snoU13.26-201ENST00000459452 105 ntBASIC2.42□□□□□ -2.02
HOXC12P31275 Y_RNA.692-201ENST00000516627 105 ntBASIC2.42□□□□□ -2.02
HOXC12P31275 Y_RNA.757-201ENST00000578934 114 ntBASIC2.42□□□□□ -2.02
HOXC12P31275 MIR4524B-201ENST00000581569 115 ntBASIC2.42□□□□□ -2.02
HOXC12P31275 MIR4769-201ENST00000584126 77 ntBASIC2.42□□□□□ -2.02
HOXC12P31275 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
HOXC12P31275 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXC12P31275 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
HOXC12P31275 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
HOXC12P31275 RNA5SP68-201ENST00000363885 119 ntBASIC2.41□□□□□ -2.02
HOXC12P31275 Y_RNA.261-201ENST00000364631 102 ntBASIC2.41□□□□□ -2.02
HOXC12P31275 Y_RNA.294-201ENST00000364916 102 ntBASIC2.41□□□□□ -2.02
HOXC12P31275 RNU6-1292P-201ENST00000383856 107 ntBASIC2.41□□□□□ -2.02
HOXC12P31275 MIR518F-201ENST00000384973 87 ntBASIC2.41□□□□□ -2.02
HOXC12P31275 RNA5SP21-201ENST00000410917 96 ntBASIC2.41□□□□□ -2.02
HOXC12P31275 RNA5SP450-201ENST00000411206 102 ntBASIC2.41□□□□□ -2.02
HOXC12P31275 CALM2P4-201ENST00000430810 426 ntBASIC2.41□□□□□ -2.02
HOXC12P31275 HMGN2P32-201ENST00000444648 269 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms