Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 RNU7-4P-201ENST00000516961 62 ntBASIC0.59□□□□□ -2.31
COL5A3P25940 RNU7-128P-201ENST00000517247 62 ntBASIC0.59□□□□□ -2.31
COL5A3P25940 MIR5188-201ENST00000583467 113 ntBASIC0.59□□□□□ -2.31
COL5A3P25940 POLR3GP1-201ENST00000594073 261 ntBASIC0.59□□□□□ -2.31
COL5A3P25940 AC011373.1-201ENST00000607270 237 ntBASIC0.59□□□□□ -2.31
COL5A3P25940 U6.92-201ENST00000636464 89 ntBASIC0.59□□□□□ -2.31
COL5A3P25940 Y_RNA.368-201ENST00000365547 113 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 Y_RNA.431-201ENST00000384086 102 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 RNU6-439P-201ENST00000384188 106 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 Y_RNA.551-201ENST00000384661 102 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 MIR653-201ENST00000385279 96 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 AL031003.1-201ENST00000404229 172 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 RNU6-101P-201ENST00000410323 104 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 RNU6-710P-201ENST00000410424 105 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 RNU6-1054P-201ENST00000411293 104 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 MCFD2P1-201ENST00000417812 300 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 RPEP5-201ENST00000441137 268 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 MTND4P19-201ENST00000446659 478 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 AC233266.1-201ENST00000454518 96 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 RNU6-947P-201ENST00000516264 106 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 RNU7-28P-201ENST00000516759 62 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 SNORD116.3-201ENST00000517176 78 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 AC040926.1-201ENST00000530195 238 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 AL512310.8-201ENST00000550183 120 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 MIR3684-201ENST00000579779 74 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 MIR4514-201ENST00000581410 57 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.58□□□□□ -2.32
COL5A3P25940 RPS29P30-201ENST00000600975 111 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 AC242852.1-201ENST00000612151 96 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 Y_RNA.804-201ENST00000615262 101 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 AC010205.1-201ENST00000616668 449 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 AL138825.1-201ENST00000618587 192 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 AC244015.1-201ENST00000622301 99 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 AC134503.1-201ENST00000633048 54 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 MIR4272-201ENST00000635924 64 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
COL5A3P25940 SNORD68-201ENST00000363214 84 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 RNU1-124P-201ENST00000363861 145 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 Y_RNA.230-201ENST00000364348 109 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 RNU5E-4P-201ENST00000364931 120 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 RNU6-117P-201ENST00000365415 107 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 SNORA25-201ENST00000384384 134 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 RNU6-308P-201ENST00000390957 107 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.58□□□□□ -2.32
COL5A3P25940 RNU7-34P-201ENST00000459394 64 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 Y_RNA.631-201ENST00000459607 101 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 SEPT14P8-201ENST00000508026 178 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 RNU6-976P-201ENST00000516086 111 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 RNU6-155P-201ENST00000516347 100 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 RN7SKP88-201ENST00000516847 250 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 CYP3A52P-201ENST00000563326 91 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 AC055872.1-201ENST00000570978 278 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 SNORA28-201ENST00000606769 126 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 7SK.8-201ENST00000612110 250 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 AC040896.1-201ENST00000613819 479 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 7SK.11-201ENST00000615477 250 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 7SK.13-201ENST00000622040 250 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.58□□□□□ -2.32
COL5A3P25940 MIRLET7C-201ENST00000362160 84 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 RNU6-1123P-201ENST00000362347 106 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 Y_RNA.39-201ENST00000362620 98 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 RNU6-797P-201ENST00000363101 109 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 SNORD115-30-201ENST00000364117 82 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 Y_RNA.310-201ENST00000365063 113 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 Y_RNA.361-201ENST00000365515 120 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 RNA5SP259-201ENST00000365541 109 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 Y_RNA.383-201ENST00000383855 97 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 SNORA22B-201ENST00000383876 138 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 Y_RNA.439-201ENST00000384119 94 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 RNU6-424P-201ENST00000384367 105 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 MIR520G-201ENST00000385064 90 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 RNA5SP299-201ENST00000391203 116 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 AL034345.1-201ENST00000407768 123 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.57□□□□□ -2.32
COL5A3P25940 PIGPP3-201ENST00000425307 415 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 AL162725.1-201ENST00000435405 301 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 AC093850.1-201ENST00000454121 251 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 RNU6-966P-201ENST00000516479 104 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 Y_RNA.713-201ENST00000517013 96 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 AP002004.2-201ENST00000531656 154 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.57□□□□□ -2.32
COL5A3P25940 AL513534.2-201ENST00000603836 250 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 AL121655.1-201ENST00000605811 308 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 AC090574.1-201ENST00000623186 233 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 SNORD3E-202ENST00000627253 216 ntBASIC0.57□□□□□ -2.32
COL5A3P25940 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.57□□□□□ -2.32
COL5A3P25940 MIR302D-201ENST00000362275 68 ntBASIC0.56□□□□□ -2.32
COL5A3P25940 RNU6-199P-201ENST00000362954 107 ntBASIC0.56□□□□□ -2.32
COL5A3P25940 SNORD81.1-201ENST00000363064 77 ntBASIC0.56□□□□□ -2.32
COL5A3P25940 Y_RNA.124-201ENST00000363339 93 ntBASIC0.56□□□□□ -2.32
COL5A3P25940 Y_RNA.152-201ENST00000363578 100 ntBASIC0.56□□□□□ -2.32
COL5A3P25940 Y_RNA.222-201ENST00000364264 102 ntBASIC0.56□□□□□ -2.32
COL5A3P25940 RNU4-50P-201ENST00000364361 141 ntBASIC0.56□□□□□ -2.32
COL5A3P25940 RNU1-115P-201ENST00000365329 160 ntBASIC0.56□□□□□ -2.32
COL5A3P25940 Y_RNA.456-201ENST00000384232 111 ntBASIC0.56□□□□□ -2.32
COL5A3P25940 Y_RNA.570-201ENST00000384750 101 ntBASIC0.56□□□□□ -2.32
COL5A3P25940 MIR215-201ENST00000384858 110 ntBASIC0.56□□□□□ -2.32
COL5A3P25940 RNU6-823P-201ENST00000391042 103 ntBASIC0.56□□□□□ -2.32
COL5A3P25940 RNU4-30P-201ENST00000410245 143 ntBASIC0.56□□□□□ -2.32
COL5A3P25940 RNA5SP266-201ENST00000410273 108 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms