| YY1 | P25490 | 5S_rRNA.3-201 | ENST00000517021 | 110 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| YY1 | P25490 | AC127455.1-201 | ENST00000565496 | 145 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| YY1 | P25490 | MIR5688-201 | ENST00000580619 | 83 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| YY1 | P25490 | AC022217.4-201 | ENST00000604389 | 163 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| YY1 | P25490 | AC069114.2-201 | ENST00000604699 | 304 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| YY1 | P25490 | 5S_rRNA.19-201 | ENST00000612131 | 110 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| YY1 | P25490 | AL442067.1-201 | ENST00000613261 | 223 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| YY1 | P25490 | AC073349.3-201 | ENST00000617616 | 186 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| YY1 | P25490 | 5S_rRNA.18-201 | ENST00000621941 | 110 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| YY1 | P25490 | AC100821.1-201 | ENST00000523153 | 2479 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| YY1 | P25490 | RNU6-112P-201 | ENST00000363599 | 104 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| YY1 | P25490 | SNORD114-27-201 | ENST00000363766 | 70 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| YY1 | P25490 | RNU6-674P-201 | ENST00000363831 | 107 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| YY1 | P25490 | SNORA20.1-201 | ENST00000364790 | 130 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| YY1 | P25490 | RNU6-338P-201 | ENST00000383888 | 105 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| YY1 | P25490 | RNU6-211P-201 | ENST00000384047 | 107 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| YY1 | P25490 | Y_RNA.477-201 | ENST00000384352 | 108 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| YY1 | P25490 | MIR520G-201 | ENST00000385064 | 90 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| YY1 | P25490 | AC009310.1-201 | ENST00000414414 | 451 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| YY1 | P25490 | AL606517.2-201 | ENST00000442855 | 241 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| YY1 | P25490 | U8.19-201 | ENST00000459095 | 133 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| YY1 | P25490 | RNU7-141P-201 | ENST00000459304 | 62 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| YY1 | P25490 | AC137770.1-201 | ENST00000504620 | 530 nt | TSL 3 BASIC | 2.09 | □□□□□ -2.07 | | |
| YY1 | P25490 | RNU7-116P-201 | ENST00000516940 | 62 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| YY1 | P25490 | AC027419.1-201 | ENST00000522976 | 328 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| YY1 | P25490 | AC084364.2-201 | ENST00000546924 | 395 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| YY1 | P25490 | AC022254.1-201 | ENST00000567857 | 235 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| YY1 | P25490 | AC135050.6-201 | ENST00000610813 | 528 nt | TSL 3 BASIC | 2.09 | □□□□□ -2.07 | | |
| YY1 | P25490 | AL627230.6-201 | ENST00000611129 | 280 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| YY1 | P25490 | MIR6086-201 | ENST00000638065 | 55 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| YY1 | P25490 | GNPDA2-204 | ENST00000509756 | 5382 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.09 | □□□□□ -2.08 | | |
| YY1 | P25490 | MGAT4C-207 | ENST00000552808 | 1937 nt | APPRIS P1 TSL 2 BASIC | 2.09 | □□□□□ -2.08 | | |
| YY1 | P25490 | RNA5SP257-201 | ENST00000363023 | 116 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| YY1 | P25490 | RNU6-653P-201 | ENST00000363074 | 106 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| YY1 | P25490 | RNU6-899P-201 | ENST00000363947 | 107 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| YY1 | P25490 | U8.7-201 | ENST00000364940 | 136 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| YY1 | P25490 | SNORA67.6-201 | ENST00000391093 | 99 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| YY1 | P25490 | AC010409.1-201 | ENST00000487382 | 476 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| YY1 | P25490 | SNORD116-28-201 | ENST00000516123 | 91 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| YY1 | P25490 | RNU1-142P-201 | ENST00000516682 | 145 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| YY1 | P25490 | MIR5692C2-201 | ENST00000577959 | 77 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| YY1 | P25490 | AC005357.1-201 | ENST00000588399 | 301 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| YY1 | P25490 | AC073413.2-201 | ENST00000604332 | 360 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| YY1 | P25490 | MIR548AY-201 | ENST00000617669 | 107 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| YY1 | P25490 | U1.36-201 | ENST00000620684 | 176 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| YY1 | P25490 | MIR6079-201 | ENST00000635807 | 62 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| YY1 | P25490 | OSBPL1A-217 | ENST00000638614 | 84 nt | TSL 5 BASIC | 2.08 | □□□□□ -2.08 | | |
| YY1 | P25490 | SYT14-201 | ENST00000367015 | 5094 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.08 | □□□□□ -2.08 | | |
| YY1 | P25490 | CYLC2-202 | ENST00000487798 | 2053 nt | APPRIS P1 TSL 5 BASIC | 2.08 | □□□□□ -2.08 | | |
| YY1 | P25490 | ASPN-202 | ENST00000375544 | 2470 nt | APPRIS P1 TSL 1 (best) BASIC | 2.07 | □□□□□ -2.08 | | |
| YY1 | P25490 | SNORD27-201 | ENST00000363981 | 72 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| YY1 | P25490 | RNU6-1048P-201 | ENST00000364054 | 107 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| YY1 | P25490 | Y_RNA.257-201 | ENST00000364596 | 102 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| YY1 | P25490 | RNU6-969P-201 | ENST00000383900 | 105 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| YY1 | P25490 | SNORA72-201 | ENST00000384339 | 132 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| YY1 | P25490 | TRAJ41-201 | ENST00000390496 | 62 nt | APPRIS P1 BASIC | 2.07 | □□□□□ -2.08 | | |
| YY1 | P25490 | SNORA12.1-201 | ENST00000390873 | 148 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| YY1 | P25490 | RNU11-5P-201 | ENST00000391216 | 129 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| YY1 | P25490 | SUMO2P12-201 | ENST00000405924 | 140 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| YY1 | P25490 | MIR1278-201 | ENST00000408753 | 81 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| YY1 | P25490 | RNU7-94P-201 | ENST00000459576 | 63 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| YY1 | P25490 | AC025033.1-201 | ENST00000463883 | 194 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| YY1 | P25490 | AC100767.1-201 | ENST00000528178 | 123 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| YY1 | P25490 | AC084365.1-201 | ENST00000552470 | 310 nt | TSL 3 BASIC | 2.07 | □□□□□ -2.08 | | |
| YY1 | P25490 | GS1-279B7.1-204 | ENST00000641809 | 378 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| YY1 | P25490 | Y_RNA.294-201 | ENST00000364916 | 102 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| YY1 | P25490 | RNA5SP363-201 | ENST00000365072 | 115 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| YY1 | P25490 | RNU6-144P-201 | ENST00000383951 | 107 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| YY1 | P25490 | MIR526A2-201 | ENST00000390198 | 65 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| YY1 | P25490 | RPL31P63-201 | ENST00000422565 | 375 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| YY1 | P25490 | AC108059.2-201 | ENST00000434626 | 151 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| YY1 | P25490 | AC092783.1-201 | ENST00000435832 | 231 nt | TSL 3 BASIC | 2.06 | □□□□□ -2.08 | | |
| YY1 | P25490 | AL121580.1-201 | ENST00000449941 | 219 nt | TSL 3 BASIC | 2.06 | □□□□□ -2.08 | | |
| YY1 | P25490 | AC091021.1-201 | ENST00000468051 | 388 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| YY1 | P25490 | AC095059.1-201 | ENST00000502570 | 349 nt | TSL 5 BASIC | 2.06 | □□□□□ -2.08 | | |
| YY1 | P25490 | MRPS17P9-201 | ENST00000511924 | 393 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| YY1 | P25490 | RNU6-388P-201 | ENST00000517012 | 105 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| YY1 | P25490 | RNU6-389P-201 | ENST00000517048 | 105 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| YY1 | P25490 | AC024405.2-202 | ENST00000532731 | 184 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| YY1 | P25490 | MIR3122-201 | ENST00000577243 | 73 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| YY1 | P25490 | AC078899.2-201 | ENST00000595282 | 212 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| YY1 | P25490 | 5S_rRNA.11-201 | ENST00000618635 | 84 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| YY1 | P25490 | AC008555.8-201 | ENST00000623602 | 2168 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| YY1 | P25490 | AC134026.1-201 | ENST00000623249 | 2239 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| YY1 | P25490 | Y_RNA.292-201 | ENST00000364904 | 97 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| YY1 | P25490 | SNORA8-201 | ENST00000384574 | 139 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| YY1 | P25490 | Y_RNA.552-201 | ENST00000384665 | 112 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| YY1 | P25490 | MIR562-201 | ENST00000384894 | 95 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| YY1 | P25490 | AL158823.1-201 | ENST00000418441 | 478 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| YY1 | P25490 | HMGN2P19-201 | ENST00000425149 | 265 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| YY1 | P25490 | BTF3P11-201 | ENST00000426582 | 477 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| YY1 | P25490 | AC069257.2-201 | ENST00000441819 | 155 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| YY1 | P25490 | MIR5094-201 | ENST00000578766 | 85 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| YY1 | P25490 | MIR4287-201 | ENST00000579398 | 78 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| YY1 | P25490 | AL161716.1-201 | ENST00000606365 | 273 nt | TSL 5 BASIC | 2.05 | □□□□□ -2.08 | | |
| YY1 | P25490 | AL021707.8-201 | ENST00000609428 | 183 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| YY1 | P25490 | AC078938.1-201 | ENST00000620993 | 318 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| YY1 | P25490 | AL442644.1-201 | ENST00000454390 | 3105 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| YY1 | P25490 | LRRIQ3-204 | ENST00000395089 | 2673 nt | APPRIS P2 TSL 5 BASIC | 2.04 | □□□□□ -2.08 | | |
| YY1 | P25490 | RNU6-1186P-201 | ENST00000410429 | 97 nt | BASIC | 2.04 | □□□□□ -2.08 | | |