Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 RNU6-1298P-201ENST00000362456 101 ntBASIC2.27□□□□□ -2.05
POLR2AP24928 MIR562-201ENST00000384894 95 ntBASIC2.27□□□□□ -2.05
POLR2AP24928 RNA5SP127-201ENST00000411051 133 ntBASIC2.27□□□□□ -2.05
POLR2AP24928 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.27□□□□□ -2.05
POLR2AP24928 MIR3199-1-201ENST00000582434 88 ntBASIC2.27□□□□□ -2.05
POLR2AP24928 AL929325.1-201ENST00000603096 117 ntBASIC2.27□□□□□ -2.05
POLR2AP24928 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.27□□□□□ -2.05
POLR2AP24928 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.27□□□□□ -2.05
POLR2AP24928 RNU1-72P-201ENST00000362976 153 ntBASIC2.27□□□□□ -2.05
POLR2AP24928 Y_RNA.116-201ENST00000363292 103 ntBASIC2.27□□□□□ -2.05
POLR2AP24928 RNU6-647P-201ENST00000364243 107 ntBASIC2.27□□□□□ -2.05
POLR2AP24928 MIR873-201ENST00000401120 77 ntBASIC2.27□□□□□ -2.05
POLR2AP24928 RNU6-1186P-201ENST00000410429 97 ntBASIC2.27□□□□□ -2.05
POLR2AP24928 HMGN2P35-201ENST00000412164 270 ntBASIC2.27□□□□□ -2.05
POLR2AP24928 MTCO1P44-201ENST00000441935 243 ntBASIC2.27□□□□□ -2.05
POLR2AP24928 SNORD77.4-201ENST00000516158 81 ntBASIC2.27□□□□□ -2.05
POLR2AP24928 RNU6-659P-201ENST00000516454 104 ntBASIC2.27□□□□□ -2.05
POLR2AP24928 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
POLR2AP24928 SNORA63.4-201ENST00000362763 126 ntBASIC2.26□□□□□ -2.05
POLR2AP24928 RNU6-486P-201ENST00000363116 107 ntBASIC2.26□□□□□ -2.05
POLR2AP24928 SNORA68.1-201ENST00000364537 132 ntBASIC2.26□□□□□ -2.05
POLR2AP24928 AC010598.1-201ENST00000510378 103 ntBASIC2.26□□□□□ -2.05
POLR2AP24928 AC011406.1-201ENST00000512440 370 ntBASIC2.26□□□□□ -2.05
POLR2AP24928 Y_RNA.677-201ENST00000516401 85 ntBASIC2.26□□□□□ -2.05
POLR2AP24928 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
POLR2AP24928 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
POLR2AP24928 SNORD114-6-201ENST00000364393 72 ntBASIC2.25□□□□□ -2.05
POLR2AP24928 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
POLR2AP24928 Y_RNA.714-201ENST00000517065 90 ntBASIC2.25□□□□□ -2.05
POLR2AP24928 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.25□□□□□ -2.05
POLR2AP24928 MTND5P34-201ENST00000568888 325 ntBASIC2.25□□□□□ -2.05
POLR2AP24928 RNU6-661P-201ENST00000362409 107 ntBASIC2.25□□□□□ -2.05
POLR2AP24928 AL627390.1-201ENST00000396055 340 ntBASIC2.25□□□□□ -2.05
POLR2AP24928 RNU2-32P-201ENST00000411193 191 ntBASIC2.25□□□□□ -2.05
POLR2AP24928 HMGN2P34-201ENST00000437647 269 ntBASIC2.25□□□□□ -2.05
POLR2AP24928 AC027419.1-201ENST00000522976 328 ntBASIC2.25□□□□□ -2.05
POLR2AP24928 MIR7515-201ENST00000637837 67 ntBASIC2.25□□□□□ -2.05
POLR2AP24928 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
POLR2AP24928 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
POLR2AP24928 RNU6-862P-201ENST00000362804 105 ntBASIC2.24□□□□□ -2.05
POLR2AP24928 RNU6-442P-201ENST00000383968 104 ntBASIC2.24□□□□□ -2.05
POLR2AP24928 Y_RNA.466-201ENST00000384294 113 ntBASIC2.24□□□□□ -2.05
POLR2AP24928 MIR561-201ENST00000385216 97 ntBASIC2.24□□□□□ -2.05
POLR2AP24928 AC006461.1-201ENST00000412637 326 ntBASIC2.24□□□□□ -2.05
POLR2AP24928 AL035461.1-201ENST00000421490 332 ntBASIC2.24□□□□□ -2.05
POLR2AP24928 AC080013.2-201ENST00000460866 323 ntBASIC2.24□□□□□ -2.05
POLR2AP24928 RNA5SP182-201ENST00000516064 82 ntBASIC2.24□□□□□ -2.05
POLR2AP24928 RNU6-1291P-201ENST00000516591 104 ntBASIC2.24□□□□□ -2.05
POLR2AP24928 SNORD59.2-201ENST00000516873 68 ntBASIC2.24□□□□□ -2.05
POLR2AP24928 RNU7-172P-201ENST00000517125 64 ntBASIC2.24□□□□□ -2.05
POLR2AP24928 MIR4662B-201ENST00000579498 81 ntBASIC2.24□□□□□ -2.05
POLR2AP24928 AC011603.4-201ENST00000611325 277 ntBASIC2.24□□□□□ -2.05
POLR2AP24928 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.24□□□□□ -2.05
POLR2AP24928 AC084768.2-201ENST00000622736 221 ntBASIC2.24□□□□□ -2.05
POLR2AP24928 MIR1248-201ENST00000629190 106 ntBASIC2.24□□□□□ -2.05
POLR2AP24928 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.24□□□□□ -2.05
POLR2AP24928 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
POLR2AP24928 MIR367-201ENST00000362299 68 ntBASIC2.23□□□□□ -2.05
POLR2AP24928 Y_RNA.91-201ENST00000363042 107 ntBASIC2.23□□□□□ -2.05
POLR2AP24928 RNU6-1138P-201ENST00000365359 106 ntBASIC2.23□□□□□ -2.05
POLR2AP24928 RNU6-1336P-201ENST00000383886 109 ntBASIC2.23□□□□□ -2.05
POLR2AP24928 RNU6-476P-201ENST00000384726 107 ntBASIC2.23□□□□□ -2.05
POLR2AP24928 AC245047.4-201ENST00000433189 144 ntBASIC2.23□□□□□ -2.05
POLR2AP24928 AC245102.2-201ENST00000448956 180 ntBASIC2.23□□□□□ -2.05
POLR2AP24928 RNU7-95P-201ENST00000459222 64 ntBASIC2.23□□□□□ -2.05
POLR2AP24928 AL049830.1-201ENST00000468034 425 ntBASIC2.23□□□□□ -2.05
POLR2AP24928 RNU6-63P-201ENST00000516690 95 ntBASIC2.23□□□□□ -2.05
POLR2AP24928 AL358944.1-201ENST00000528537 144 ntBASIC2.23□□□□□ -2.05
POLR2AP24928 AP001328.1-201ENST00000528550 176 ntBASIC2.23□□□□□ -2.05
POLR2AP24928 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
POLR2AP24928 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
POLR2AP24928 RNU1-22P-201ENST00000363334 158 ntBASIC2.23□□□□□ -2.05
POLR2AP24928 MIR570-201ENST00000384917 97 ntBASIC2.23□□□□□ -2.05
POLR2AP24928 MIR1253-201ENST00000408273 105 ntBASIC2.23□□□□□ -2.05
POLR2AP24928 RNU7-107P-201ENST00000459121 61 ntBASIC2.23□□□□□ -2.05
POLR2AP24928 AC104435.1-201ENST00000483483 166 ntBASIC2.23□□□□□ -2.05
POLR2AP24928 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.23□□□□□ -2.05
POLR2AP24928 AC007751.1-201ENST00000529260 376 ntBASIC2.23□□□□□ -2.05
POLR2AP24928 AL355297.2-201ENST00000604792 129 ntBASIC2.23□□□□□ -2.05
POLR2AP24928 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
POLR2AP24928 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
POLR2AP24928 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
POLR2AP24928 RNU6-1084P-201ENST00000362498 107 ntBASIC2.22□□□□□ -2.05
POLR2AP24928 MIR1323-201ENST00000408090 73 ntBASIC2.22□□□□□ -2.05
POLR2AP24928 SRIP3-201ENST00000413200 219 ntBASIC2.22□□□□□ -2.05
POLR2AP24928 RPS27P1-201ENST00000450552 247 ntBASIC2.22□□□□□ -2.05
POLR2AP24928 SNORD33.1-201ENST00000516213 88 ntBASIC2.22□□□□□ -2.05
POLR2AP24928 AC010297.1-201ENST00000623948 149 ntBASIC2.22□□□□□ -2.05
POLR2AP24928 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
POLR2AP24928 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
POLR2AP24928 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
POLR2AP24928 RNU6-508P-201ENST00000363231 103 ntBASIC2.21□□□□□ -2.05
POLR2AP24928 SNORA22-201ENST00000383907 134 ntBASIC2.21□□□□□ -2.05
POLR2AP24928 MIR520G-201ENST00000385064 90 ntBASIC2.21□□□□□ -2.05
POLR2AP24928 RNU6-412P-201ENST00000516434 106 ntBASIC2.21□□□□□ -2.05
POLR2AP24928 RNU6-113P-201ENST00000516653 101 ntBASIC2.21□□□□□ -2.05
POLR2AP24928 RNU6-856P-201ENST00000516959 98 ntBASIC2.21□□□□□ -2.05
POLR2AP24928 SNORA31.26-201ENST00000517250 137 ntBASIC2.21□□□□□ -2.05
POLR2AP24928 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.21□□□□□ -2.05
POLR2AP24928 MIR3683-201ENST00000580847 82 ntBASIC2.21□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms