Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 RNU2-70P-201ENST00000410718 179 ntBASIC0.3□□□□□ -2.36
USF1P22415 PRDX4P1-201ENST00000507189 574 ntBASIC0.3□□□□□ -2.36
USF1P22415 RNU4-57P-201ENST00000515980 135 ntBASIC0.3□□□□□ -2.36
USF1P22415 MIR4514-201ENST00000581410 57 ntBASIC0.3□□□□□ -2.36
USF1P22415 AC012433.1-201ENST00000588916 398 ntBASIC0.3□□□□□ -2.36
USF1P22415 AC080013.6-201ENST00000606185 215 ntBASIC0.3□□□□□ -2.36
USF1P22415 Y_RNA.230-201ENST00000364348 109 ntBASIC0.29□□□□□ -2.36
USF1P22415 Y_RNA.516-201ENST00000384541 124 ntBASIC0.29□□□□□ -2.36
USF1P22415 SNORD78.2-201ENST00000391076 69 ntBASIC0.29□□□□□ -2.36
USF1P22415 MIR1277-201ENST00000408536 78 ntBASIC0.29□□□□□ -2.36
USF1P22415 AC016907.1-201ENST00000419483 435 ntBASIC0.29□□□□□ -2.36
USF1P22415 MTCO2P12-201ENST00000427426 682 ntBASIC0.29□□□□□ -2.36
USF1P22415 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.29□□□□□ -2.36
USF1P22415 RNU6-830P-201ENST00000516353 107 ntBASIC0.29□□□□□ -2.36
USF1P22415 RNU7-116P-201ENST00000516940 62 ntBASIC0.29□□□□□ -2.36
USF1P22415 RNU6-264P-201ENST00000517134 104 ntBASIC0.29□□□□□ -2.36
USF1P22415 AC144568.1-201ENST00000520139 137 ntBASIC0.29□□□□□ -2.36
USF1P22415 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.29□□□□□ -2.36
USF1P22415 AC002553.4-201ENST00000616896 331 ntBASIC0.29□□□□□ -2.36
USF1P22415 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
USF1P22415 RNA5SP257-201ENST00000363023 116 ntBASIC0.28□□□□□ -2.36
USF1P22415 Y_RNA.146-201ENST00000363549 102 ntBASIC0.28□□□□□ -2.36
USF1P22415 Y_RNA.376-201ENST00000365638 108 ntBASIC0.28□□□□□ -2.36
USF1P22415 RNU6-442P-201ENST00000383968 104 ntBASIC0.28□□□□□ -2.36
USF1P22415 RNY1P8-201ENST00000383970 114 ntBASIC0.28□□□□□ -2.36
USF1P22415 MIR573-201ENST00000384964 99 ntBASIC0.28□□□□□ -2.36
USF1P22415 RNU7-4P-201ENST00000516961 62 ntBASIC0.28□□□□□ -2.36
USF1P22415 Pinc.1-201ENST00000616452 154 ntBASIC0.28□□□□□ -2.36
USF1P22415 AL669831.3-213ENST00000636676 183 ntBASIC0.28□□□□□ -2.36
USF1P22415 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.27□□□□□ -2.37
USF1P22415 Y_RNA.72-201ENST00000362894 103 ntBASIC0.27□□□□□ -2.37
USF1P22415 RNU6-855P-201ENST00000410395 104 ntBASIC0.27□□□□□ -2.37
USF1P22415 MTCO2P27-201ENST00000420740 428 ntBASIC0.27□□□□□ -2.37
USF1P22415 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.27□□□□□ -2.37
USF1P22415 AC002350.1-201ENST00000490759 375 ntBASIC0.27□□□□□ -2.37
USF1P22415 SNORA68.3-201ENST00000515906 83 ntBASIC0.27□□□□□ -2.37
USF1P22415 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.27□□□□□ -2.37
USF1P22415 AC022441.3-201ENST00000605737 136 ntBASIC0.27□□□□□ -2.37
USF1P22415 JPX_2.1-201ENST00000614161 69 ntBASIC0.27□□□□□ -2.37
USF1P22415 AC015726.2-201ENST00000620112 122 ntBASIC0.27□□□□□ -2.37
USF1P22415 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
USF1P22415 AC090625.1-201ENST00000357130 210 ntBASIC0.26□□□□□ -2.37
USF1P22415 MIR377-201ENST00000362145 69 ntBASIC0.26□□□□□ -2.37
USF1P22415 Y_RNA.203-201ENST00000364106 102 ntBASIC0.26□□□□□ -2.37
USF1P22415 RNU6-580P-201ENST00000365159 107 ntBASIC0.26□□□□□ -2.37
USF1P22415 RNU4-45P-201ENST00000365469 141 ntBASIC0.26□□□□□ -2.37
USF1P22415 SNORA51.10-201ENST00000384418 136 ntBASIC0.26□□□□□ -2.37
USF1P22415 Y_RNA.537-201ENST00000384626 109 ntBASIC0.26□□□□□ -2.37
USF1P22415 MT-TN-201ENST00000387400 73 ntBASIC0.26□□□□□ -2.37
USF1P22415 MIR802-201ENST00000390235 94 ntBASIC0.26□□□□□ -2.37
USF1P22415 U8.17-201ENST00000391292 132 ntBASIC0.26□□□□□ -2.37
USF1P22415 MCFD2P1-201ENST00000417812 300 ntBASIC0.26□□□□□ -2.37
USF1P22415 MTND1P2-201ENST00000430604 821 ntBASIC0.26□□□□□ -2.37
USF1P22415 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.26□□□□□ -2.37
USF1P22415 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.26□□□□□ -2.37
USF1P22415 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.26□□□□□ -2.37
USF1P22415 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
USF1P22415 POLR3GP1-201ENST00000594073 261 ntBASIC0.26□□□□□ -2.37
USF1P22415 AC023932.2-201ENST00000603176 175 ntBASIC0.26□□□□□ -2.37
USF1P22415 MIRLET7D-201ENST00000362263 87 ntBASIC0.25□□□□□ -2.37
USF1P22415 RNU6-369P-201ENST00000362515 102 ntBASIC0.25□□□□□ -2.37
USF1P22415 Y_RNA.329-201ENST00000365209 107 ntBASIC0.25□□□□□ -2.37
USF1P22415 Y_RNA.341-201ENST00000365341 102 ntBASIC0.25□□□□□ -2.37
USF1P22415 MIR570-201ENST00000384917 97 ntBASIC0.25□□□□□ -2.37
USF1P22415 MIR548F1-201ENST00000408667 84 ntBASIC0.25□□□□□ -2.37
USF1P22415 SNRPGP14-201ENST00000435400 219 ntBASIC0.25□□□□□ -2.37
USF1P22415 RNU6-966P-201ENST00000516479 104 ntBASIC0.25□□□□□ -2.37
USF1P22415 RNU6-1213P-201ENST00000517075 94 ntBASIC0.25□□□□□ -2.37
USF1P22415 MIR4659A-201ENST00000580269 81 ntBASIC0.25□□□□□ -2.37
USF1P22415 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.25□□□□□ -2.37
USF1P22415 RNU6-767P-201ENST00000384132 107 ntBASIC0.24□□□□□ -2.37
USF1P22415 Y_RNA.456-201ENST00000384232 111 ntBASIC0.24□□□□□ -2.37
USF1P22415 RNU6-1215P-201ENST00000384441 102 ntBASIC0.24□□□□□ -2.37
USF1P22415 RNA5SP63-201ENST00000391225 112 ntBASIC0.24□□□□□ -2.37
USF1P22415 SNORA75.6-201ENST00000391318 127 ntBASIC0.24□□□□□ -2.37
USF1P22415 RPL30P15-201ENST00000457129 321 ntBASIC0.24□□□□□ -2.37
USF1P22415 HMGN1P10-201ENST00000474557 553 ntBASIC0.24□□□□□ -2.37
USF1P22415 RNU6-470P-201ENST00000515954 104 ntBASIC0.24□□□□□ -2.37
USF1P22415 RNU6-718P-201ENST00000516166 105 ntBASIC0.24□□□□□ -2.37
USF1P22415 Y_RNA.681-201ENST00000516445 113 ntBASIC0.24□□□□□ -2.37
USF1P22415 RN7SKP295-201ENST00000517264 153 ntBASIC0.24□□□□□ -2.37
USF1P22415 MIR548AO-201ENST00000579992 96 ntBASIC0.24□□□□□ -2.37
USF1P22415 AP000753.3-201ENST00000604083 169 ntBASIC0.24□□□□□ -2.37
USF1P22415 AP003357.1-201ENST00000604497 148 ntBASIC0.24□□□□□ -2.37
USF1P22415 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.24□□□□□ -2.37
USF1P22415 MIR18A-201ENST00000362310 71 ntBASIC0.23□□□□□ -2.37
USF1P22415 RNU6-268P-201ENST00000364174 107 ntBASIC0.23□□□□□ -2.37
USF1P22415 Y_RNA.310-201ENST00000365063 113 ntBASIC0.23□□□□□ -2.37
USF1P22415 RNU6-934P-201ENST00000365154 107 ntBASIC0.23□□□□□ -2.37
USF1P22415 SNORA1.2-201ENST00000365189 134 ntBASIC0.23□□□□□ -2.37
USF1P22415 MIR520F-201ENST00000384824 87 ntBASIC0.23□□□□□ -2.37
USF1P22415 MIR520H-201ENST00000385126 88 ntBASIC0.23□□□□□ -2.37
USF1P22415 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
USF1P22415 Y_RNA.605-201ENST00000410577 105 ntBASIC0.23□□□□□ -2.37
USF1P22415 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.23□□□□□ -2.37
USF1P22415 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.23□□□□□ -2.37
USF1P22415 MTATP6P26-201ENST00000445926 662 ntBASIC0.23□□□□□ -2.37
USF1P22415 SCARNA8-201ENST00000515924 131 ntBASIC0.23□□□□□ -2.37
USF1P22415 RNU6-120P-201ENST00000516077 103 ntBASIC0.23□□□□□ -2.37
USF1P22415 RNU6-977P-201ENST00000516411 103 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms