Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RNU6-1135P-201ENST00000411083 103 ntBASIC2.78□□□□□ -1.96
ERCC3P19447 RNU2-55P-201ENST00000411146 174 ntBASIC2.78□□□□□ -1.96
ERCC3P19447 AL356320.1-201ENST00000429616 163 ntBASIC2.78□□□□□ -1.96
ERCC3P19447 RPS27P21-201ENST00000486977 252 ntBASIC2.78□□□□□ -1.96
ERCC3P19447 RNA5SP281-201ENST00000516504 135 ntBASIC2.78□□□□□ -1.96
ERCC3P19447 SCARNA16.3-201ENST00000516595 184 ntBASIC2.78□□□□□ -1.96
ERCC3P19447 RNA5SP168-201ENST00000516642 112 ntBASIC2.78□□□□□ -1.96
ERCC3P19447 RNU6-365P-201ENST00000517113 106 ntBASIC2.78□□□□□ -1.96
ERCC3P19447 IGKV3-31-201ENST00000523109 329 ntBASIC2.78□□□□□ -1.96
ERCC3P19447 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.78□□□□□ -1.96
ERCC3P19447 AC008507.4-201ENST00000585464 127 ntBASIC2.78□□□□□ -1.96
ERCC3P19447 AC087685.1-201ENST00000587507 141 ntBASIC2.78□□□□□ -1.96
ERCC3P19447 AC021753.1-201ENST00000635724 168 ntBASIC2.78□□□□□ -1.96
ERCC3P19447 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.78□□□□□ -1.96
ERCC3P19447 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.97
ERCC3P19447 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ERCC3P19447 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
ERCC3P19447 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ERCC3P19447 Y_RNA.242-201ENST00000364473 110 ntBASIC2.77□□□□□ -1.97
ERCC3P19447 RNU6-442P-201ENST00000383968 104 ntBASIC2.77□□□□□ -1.97
ERCC3P19447 Y_RNA.464-201ENST00000384282 110 ntBASIC2.77□□□□□ -1.97
ERCC3P19447 Y_RNA.486-201ENST00000384398 107 ntBASIC2.77□□□□□ -1.97
ERCC3P19447 RNU6-237P-201ENST00000515985 71 ntBASIC2.77□□□□□ -1.97
ERCC3P19447 MIR3144-201ENST00000579460 79 ntBASIC2.77□□□□□ -1.97
ERCC3P19447 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.77□□□□□ -1.97
ERCC3P19447 AC008555.8-201ENST00000623602 2168 ntBASIC2.76□□□□□ -1.97
ERCC3P19447 Y_RNA.91-201ENST00000363042 107 ntBASIC2.76□□□□□ -1.97
ERCC3P19447 RNU4-84P-201ENST00000364200 139 ntBASIC2.76□□□□□ -1.97
ERCC3P19447 RNU6-239P-201ENST00000390990 99 ntBASIC2.76□□□□□ -1.97
ERCC3P19447 SNORD37.2-201ENST00000391075 66 ntBASIC2.76□□□□□ -1.97
ERCC3P19447 AC005840.1-201ENST00000498412 377 ntBASIC2.76□□□□□ -1.97
ERCC3P19447 CYCTP-201ENST00000504253 315 ntBASIC2.76□□□□□ -1.97
ERCC3P19447 AC026436.1-201ENST00000510537 270 ntBASIC2.76□□□□□ -1.97
ERCC3P19447 RNU6-197P-201ENST00000516680 100 ntBASIC2.76□□□□□ -1.97
ERCC3P19447 AC007336.1-201ENST00000576365 3828 ntBASIC2.76□□□□□ -1.97
ERCC3P19447 AL137847.3-201ENST00000611521 109 ntBASIC2.76□□□□□ -1.97
ERCC3P19447 AC021506.2-201ENST00000612354 169 ntBASIC2.76□□□□□ -1.97
ERCC3P19447 AL773524.1-201ENST00000614065 229 ntBASIC2.76□□□□□ -1.97
ERCC3P19447 MIR1291-201ENST00000627649 87 ntBASIC2.76□□□□□ -1.97
ERCC3P19447 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
ERCC3P19447 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
ERCC3P19447 AP000648.3-201ENST00000623539 4507 ntBASIC2.75□□□□□ -1.97
ERCC3P19447 RNU6-414P-201ENST00000363705 104 ntBASIC2.75□□□□□ -1.97
ERCC3P19447 U8.5-201ENST00000364528 136 ntBASIC2.75□□□□□ -1.97
ERCC3P19447 Y_RNA.337-201ENST00000365312 102 ntBASIC2.75□□□□□ -1.97
ERCC3P19447 RNU6-1138P-201ENST00000365359 106 ntBASIC2.75□□□□□ -1.97
ERCC3P19447 RNU6-484P-201ENST00000384016 107 ntBASIC2.75□□□□□ -1.97
ERCC3P19447 RNU6-126P-201ENST00000516685 103 ntBASIC2.75□□□□□ -1.97
ERCC3P19447 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
ERCC3P19447 MIR1273D-201ENST00000577266 86 ntBASIC2.75□□□□□ -1.97
ERCC3P19447 MIR4524B-201ENST00000581569 115 ntBASIC2.75□□□□□ -1.97
ERCC3P19447 MIR5092-201ENST00000583139 88 ntBASIC2.75□□□□□ -1.97
ERCC3P19447 MIR4762-201ENST00000585261 75 ntBASIC2.75□□□□□ -1.97
ERCC3P19447 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
ERCC3P19447 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
ERCC3P19447 Y_RNA.634-201ENST00000364811 113 ntBASIC2.74□□□□□ -1.97
ERCC3P19447 RNU6-449P-201ENST00000383914 107 ntBASIC2.74□□□□□ -1.97
ERCC3P19447 Y_RNA.398-201ENST00000383952 99 ntBASIC2.74□□□□□ -1.97
ERCC3P19447 Y_RNA.441-201ENST00000384123 112 ntBASIC2.74□□□□□ -1.97
ERCC3P19447 RNU6-360P-201ENST00000390944 104 ntBASIC2.74□□□□□ -1.97
ERCC3P19447 RPL30P13-201ENST00000418873 348 ntBASIC2.74□□□□□ -1.97
ERCC3P19447 AC244636.1-201ENST00000421152 228 ntBASIC2.74□□□□□ -1.97
ERCC3P19447 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.74□□□□□ -1.97
ERCC3P19447 AC093850.1-201ENST00000454121 251 ntBASIC2.74□□□□□ -1.97
ERCC3P19447 MIR4778-201ENST00000577635 80 ntBASIC2.74□□□□□ -1.97
ERCC3P19447 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.74□□□□□ -1.97
ERCC3P19447 SNORD3E-202ENST00000627253 216 ntBASIC2.74□□□□□ -1.97
ERCC3P19447 AC016717.2-201ENST00000609089 5141 ntBASIC2.74□□□□□ -1.97
ERCC3P19447 RNU6-774P-201ENST00000363238 107 ntBASIC2.73□□□□□ -1.97
ERCC3P19447 RNU6-424P-201ENST00000384367 105 ntBASIC2.73□□□□□ -1.97
ERCC3P19447 MIR891A-201ENST00000401237 79 ntBASIC2.73□□□□□ -1.97
ERCC3P19447 HMGN2P32-201ENST00000444648 269 ntBASIC2.73□□□□□ -1.97
ERCC3P19447 Y_RNA.666-201ENST00000516187 112 ntBASIC2.73□□□□□ -1.97
ERCC3P19447 RNU6-1270P-201ENST00000517128 108 ntBASIC2.73□□□□□ -1.97
ERCC3P19447 MIR378D2-201ENST00000580636 98 ntBASIC2.73□□□□□ -1.97
ERCC3P19447 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.73□□□□□ -1.97
ERCC3P19447 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.73□□□□□ -1.97
ERCC3P19447 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
ERCC3P19447 RNU6-199P-201ENST00000362954 107 ntBASIC2.72□□□□□ -1.97
ERCC3P19447 RNU6-151P-201ENST00000364158 107 ntBASIC2.72□□□□□ -1.97
ERCC3P19447 RNU6-1130P-201ENST00000365434 107 ntBASIC2.72□□□□□ -1.97
ERCC3P19447 MIR548M-201ENST00000408260 86 ntBASIC2.72□□□□□ -1.97
ERCC3P19447 RNU4-43P-201ENST00000410628 137 ntBASIC2.72□□□□□ -1.97
ERCC3P19447 RNU6-394P-201ENST00000410735 107 ntBASIC2.72□□□□□ -1.97
ERCC3P19447 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
ERCC3P19447 PGBD4P5-201ENST00000445958 426 ntBASIC2.72□□□□□ -1.97
ERCC3P19447 RNA5SP153-201ENST00000516498 76 ntBASIC2.72□□□□□ -1.97
ERCC3P19447 RNU6-255P-201ENST00000516957 105 ntBASIC2.72□□□□□ -1.97
ERCC3P19447 MIR4299-201ENST00000577899 72 ntBASIC2.72□□□□□ -1.97
ERCC3P19447 MIR4769-201ENST00000584126 77 ntBASIC2.72□□□□□ -1.97
ERCC3P19447 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
ERCC3P19447 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
ERCC3P19447 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.71□□□□□ -1.98
ERCC3P19447 RNU6-439P-201ENST00000384188 106 ntBASIC2.71□□□□□ -1.98
ERCC3P19447 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.71□□□□□ -1.98
ERCC3P19447 CYCSP49-201ENST00000420810 319 ntBASIC2.71□□□□□ -1.98
ERCC3P19447 SNORD116-25-201ENST00000516517 92 ntBASIC2.71□□□□□ -1.98
ERCC3P19447 RNU6-504P-201ENST00000516568 104 ntBASIC2.71□□□□□ -1.98
ERCC3P19447 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.71□□□□□ -1.98
ERCC3P19447 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms