Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 Y_RNA.528-201ENST00000384575 108 ntBASIC2.32□□□□□ -2.04
KRT4P19013 MIR570-201ENST00000384917 97 ntBASIC2.32□□□□□ -2.04
KRT4P19013 MIR561-201ENST00000385216 97 ntBASIC2.32□□□□□ -2.04
KRT4P19013 SNORD23.1-201ENST00000408212 104 ntBASIC2.32□□□□□ -2.04
KRT4P19013 SNORA11-201ENST00000408789 128 ntBASIC2.32□□□□□ -2.04
KRT4P19013 RNY4P30-201ENST00000410216 95 ntBASIC2.32□□□□□ -2.04
KRT4P19013 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.32□□□□□ -2.04
KRT4P19013 NDUFA4P2-201ENST00000489989 244 ntBASIC2.32□□□□□ -2.04
KRT4P19013 HMGN1P7-201ENST00000491722 313 ntBASIC2.32□□□□□ -2.04
KRT4P19013 RNU6-965P-201ENST00000516721 96 ntBASIC2.32□□□□□ -2.04
KRT4P19013 RNU6-856P-201ENST00000516959 98 ntBASIC2.32□□□□□ -2.04
KRT4P19013 U2.20-201ENST00000613956 192 ntBASIC2.32□□□□□ -2.04
KRT4P19013 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.32□□□□□ -2.04
KRT4P19013 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
KRT4P19013 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.32□□□□□ -2.04
KRT4P19013 RNU6-888P-201ENST00000363010 101 ntBASIC2.31□□□□□ -2.04
KRT4P19013 Y_RNA.85-201ENST00000363014 111 ntBASIC2.31□□□□□ -2.04
KRT4P19013 RNU6-525P-201ENST00000363685 104 ntBASIC2.31□□□□□ -2.04
KRT4P19013 RNU1-96P-201ENST00000364163 162 ntBASIC2.31□□□□□ -2.04
KRT4P19013 SNORA1-201ENST00000384107 130 ntBASIC2.31□□□□□ -2.04
KRT4P19013 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
KRT4P19013 SNORA48.7-201ENST00000391302 135 ntBASIC2.31□□□□□ -2.04
KRT4P19013 RNU6-554P-201ENST00000410466 106 ntBASIC2.31□□□□□ -2.04
KRT4P19013 Y_RNA.621-201ENST00000411065 96 ntBASIC2.31□□□□□ -2.04
KRT4P19013 AC123900.1-201ENST00000420390 96 ntBASIC2.31□□□□□ -2.04
KRT4P19013 RPS15AP28-201ENST00000435088 386 ntBASIC2.31□□□□□ -2.04
KRT4P19013 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.31□□□□□ -2.04
KRT4P19013 AC079804.2-201ENST00000490376 200 ntBASIC2.31□□□□□ -2.04
KRT4P19013 COX6CP6-201ENST00000490840 228 ntBASIC2.31□□□□□ -2.04
KRT4P19013 MRPS17P9-201ENST00000511924 393 ntBASIC2.31□□□□□ -2.04
KRT4P19013 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.31□□□□□ -2.04
KRT4P19013 AC007012.1-201ENST00000567192 175 ntBASIC2.31□□□□□ -2.04
KRT4P19013 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
KRT4P19013 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
KRT4P19013 RNU6-766P-201ENST00000362478 107 ntBASIC2.3□□□□□ -2.04
KRT4P19013 SNORD61-201ENST00000384252 73 ntBASIC2.3□□□□□ -2.04
KRT4P19013 SNORD12C-201ENST00000386307 89 ntBASIC2.3□□□□□ -2.04
KRT4P19013 RNU2-32P-201ENST00000411193 191 ntBASIC2.3□□□□□ -2.04
KRT4P19013 AC107083.1-201ENST00000439643 279 ntBASIC2.3□□□□□ -2.04
KRT4P19013 AC090255.1-201ENST00000495779 349 ntBASIC2.3□□□□□ -2.04
KRT4P19013 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.3□□□□□ -2.04
KRT4P19013 AC093259.1-201ENST00000509755 300 ntBASIC2.3□□□□□ -2.04
KRT4P19013 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.3□□□□□ -2.04
KRT4P19013 RNU6-844P-201ENST00000517175 102 ntBASIC2.3□□□□□ -2.04
KRT4P19013 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.3□□□□□ -2.04
KRT4P19013 MIR1254-2-201ENST00000579553 63 ntBASIC2.3□□□□□ -2.04
KRT4P19013 MIR3944-201ENST00000581277 108 ntBASIC2.3□□□□□ -2.04
KRT4P19013 AC087685.1-201ENST00000587507 141 ntBASIC2.3□□□□□ -2.04
KRT4P19013 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.3□□□□□ -2.04
KRT4P19013 Y_RNA.332-201ENST00000365271 113 ntBASIC2.29□□□□□ -2.04
KRT4P19013 MIR1302-5-201ENST00000408164 150 ntBASIC2.29□□□□□ -2.04
KRT4P19013 CALM2P4-201ENST00000430810 426 ntBASIC2.29□□□□□ -2.04
KRT4P19013 SNRPGP10-201ENST00000432323 225 ntBASIC2.29□□□□□ -2.04
KRT4P19013 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.29□□□□□ -2.04
KRT4P19013 RNU7-99P-201ENST00000516271 62 ntBASIC2.29□□□□□ -2.04
KRT4P19013 RNU6-1149P-201ENST00000516810 97 ntBASIC2.29□□□□□ -2.04
KRT4P19013 SNORA48.11-201ENST00000517015 89 ntBASIC2.29□□□□□ -2.04
KRT4P19013 Y_RNA.714-201ENST00000517065 90 ntBASIC2.29□□□□□ -2.04
KRT4P19013 RNU6-1270P-201ENST00000517128 108 ntBASIC2.29□□□□□ -2.04
KRT4P19013 AL358944.1-201ENST00000528537 144 ntBASIC2.29□□□□□ -2.04
KRT4P19013 GTF3AP2-201ENST00000557014 266 ntBASIC2.29□□□□□ -2.04
KRT4P19013 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.29□□□□□ -2.04
KRT4P19013 AC007229.1-201ENST00000590455 412 ntBASIC2.29□□□□□ -2.04
KRT4P19013 AC073413.2-201ENST00000604332 360 ntBASIC2.29□□□□□ -2.04
KRT4P19013 AC103810.6-201ENST00000606708 136 ntBASIC2.29□□□□□ -2.04
KRT4P19013 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.29□□□□□ -2.04
KRT4P19013 AL137067.1-201ENST00000615933 120 ntBASIC2.29□□□□□ -2.04
KRT4P19013 MIR6766-201ENST00000622641 72 ntBASIC2.29□□□□□ -2.04
KRT4P19013 AC018630.2-201ENST00000534866 2403 ntBASIC2.29□□□□□ -2.04
KRT4P19013 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
KRT4P19013 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.28□□□□□ -2.04
KRT4P19013 RNU1-23P-201ENST00000363361 144 ntBASIC2.28□□□□□ -2.04
KRT4P19013 Y_RNA.253-201ENST00000364562 112 ntBASIC2.28□□□□□ -2.04
KRT4P19013 SNORA25B-201ENST00000365507 128 ntBASIC2.28□□□□□ -2.04
KRT4P19013 SNORD72-201ENST00000390994 80 ntBASIC2.28□□□□□ -2.04
KRT4P19013 EDDM3CP-201ENST00000415977 425 ntBASIC2.28□□□□□ -2.04
KRT4P19013 HMGN2P38-201ENST00000423806 265 ntBASIC2.28□□□□□ -2.04
KRT4P19013 HMGN2P34-201ENST00000437647 269 ntBASIC2.28□□□□□ -2.04
KRT4P19013 AC008507.4-201ENST00000585464 127 ntBASIC2.28□□□□□ -2.04
KRT4P19013 AC022202.1-201ENST00000613515 211 ntBASIC2.28□□□□□ -2.04
KRT4P19013 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRT4P19013 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
KRT4P19013 Y_RNA.49-201ENST00000362714 112 ntBASIC2.27□□□□□ -2.05
KRT4P19013 Y_RNA.163-201ENST00000363702 113 ntBASIC2.27□□□□□ -2.05
KRT4P19013 Y_RNA.348-201ENST00000365403 103 ntBASIC2.27□□□□□ -2.05
KRT4P19013 MIR95-201ENST00000385072 81 ntBASIC2.27□□□□□ -2.05
KRT4P19013 SNORA12.1-201ENST00000390873 148 ntBASIC2.27□□□□□ -2.05
KRT4P19013 RNU6-1186P-201ENST00000410429 97 ntBASIC2.27□□□□□ -2.05
KRT4P19013 AC060773.1-201ENST00000421698 310 ntBASIC2.27□□□□□ -2.05
KRT4P19013 SNRPGP13-201ENST00000442212 177 ntBASIC2.27□□□□□ -2.05
KRT4P19013 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.27□□□□□ -2.05
KRT4P19013 AC233266.1-201ENST00000454518 96 ntBASIC2.27□□□□□ -2.05
KRT4P19013 RPS27P21-201ENST00000486977 252 ntBASIC2.27□□□□□ -2.05
KRT4P19013 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.27□□□□□ -2.05
KRT4P19013 RNU6-693P-201ENST00000516134 107 ntBASIC2.27□□□□□ -2.05
KRT4P19013 AC046143.2-201ENST00000609789 160 ntBASIC2.27□□□□□ -2.05
KRT4P19013 AC242852.1-201ENST00000612151 96 ntBASIC2.27□□□□□ -2.05
KRT4P19013 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.27□□□□□ -2.05
KRT4P19013 AL591926.4-201ENST00000616895 298 ntBASIC2.27□□□□□ -2.05
KRT4P19013 AC009831.4-201ENST00000620744 325 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms