| MUC1 | P15941 | SNORA25-201 | ENST00000384384 | 134 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC1 | P15941 | TRAJ48-201 | ENST00000390489 | 63 nt | APPRIS P1 BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC1 | P15941 | SNORD115-46-201 | ENST00000390982 | 71 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC1 | P15941 | SNORA26.5-201 | ENST00000391215 | 123 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC1 | P15941 | RNU6ATAC19P-201 | ENST00000408096 | 110 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC1 | P15941 | MIR1278-201 | ENST00000408753 | 81 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC1 | P15941 | MIR1252-201 | ENST00000408861 | 65 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC1 | P15941 | RNU6-101P-201 | ENST00000410323 | 104 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC1 | P15941 | RNU6-1054P-201 | ENST00000411293 | 104 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC1 | P15941 | AL365434.1-201 | ENST00000412362 | 380 nt | TSL 3 BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC1 | P15941 | AC024067.1-201 | ENST00000426199 | 223 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC1 | P15941 | AC098869.1-201 | ENST00000481627 | 292 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC1 | P15941 | RPL23AP54-201 | ENST00000495129 | 419 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC1 | P15941 | RNU7-116P-201 | ENST00000516940 | 62 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC1 | P15941 | AC090142.3-201 | ENST00000519012 | 385 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC1 | P15941 | AC127455.1-201 | ENST00000565496 | 145 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC1 | P15941 | MIR3171-201 | ENST00000584270 | 74 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC1 | P15941 | MIR3192-201 | ENST00000584920 | 77 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC1 | P15941 | MIR4653-201 | ENST00000585107 | 83 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC1 | P15941 | AC013244.2-201 | ENST00000603396 | 103 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC1 | P15941 | MIR376A1-201 | ENST00000616574 | 68 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC1 | P15941 | MIR548AY-201 | ENST00000617669 | 107 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC1 | P15941 | ZNF732-201 | ENST00000419098 | 2193 nt | APPRIS P2 TSL 2 BASIC | 0.73 | □□□□□ -2.29 | | |
| MUC1 | P15941 | HSBP1P2-201 | ENST00000299671 | 229 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| MUC1 | P15941 | Y_RNA.26-201 | ENST00000362539 | 101 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| MUC1 | P15941 | Y_RNA.203-201 | ENST00000364106 | 102 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| MUC1 | P15941 | Y_RNA.214-201 | ENST00000364201 | 112 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| MUC1 | P15941 | RNU6-806P-201 | ENST00000365147 | 105 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| MUC1 | P15941 | Y_RNA.527-201 | ENST00000384573 | 102 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| MUC1 | P15941 | RNU6-910P-201 | ENST00000390844 | 107 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| MUC1 | P15941 | RNU6-131P-201 | ENST00000391144 | 107 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| MUC1 | P15941 | RNU6ATAC8P-201 | ENST00000408460 | 126 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| MUC1 | P15941 | ELOCP20-201 | ENST00000422460 | 345 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| MUC1 | P15941 | AC245047.7-201 | ENST00000440265 | 293 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| MUC1 | P15941 | RNU7-141P-201 | ENST00000459304 | 62 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| MUC1 | P15941 | RNU6-496P-201 | ENST00000516145 | 99 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| MUC1 | P15941 | RNU6-191P-201 | ENST00000516295 | 94 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| MUC1 | P15941 | RNU6-1137P-201 | ENST00000517073 | 99 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| MUC1 | P15941 | RNA5SP404-201 | ENST00000517118 | 132 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| MUC1 | P15941 | AC136628.3-201 | ENST00000521868 | 290 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| MUC1 | P15941 | BX284668.6-201 | ENST00000606899 | 438 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| MUC1 | P15941 | ZFAT-AS1_2.1-201 | ENST00000613742 | 201 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| MUC1 | P15941 | AC027335.2-201 | ENST00000624030 | 375 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| MUC1 | P15941 | ABCA9-AS1-203 | ENST00000627596 | 426 nt | TSL 5 BASIC | 0.73 | □□□□□ -2.29 | | |
| MUC1 | P15941 | CCDC14-221 | ENST00000489746 | 6476 nt | APPRIS ALT2 TSL 1 (best) BASIC | 0.72 | □□□□□ -2.29 | | |
| MUC1 | P15941 | Y_RNA.158-201 | ENST00000363651 | 101 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| MUC1 | P15941 | RNU6-1209P-201 | ENST00000363655 | 107 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| MUC1 | P15941 | SNORD114-27-201 | ENST00000363766 | 70 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| MUC1 | P15941 | Y_RNA.796-201 | ENST00000364268 | 102 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| MUC1 | P15941 | Y_RNA.799-201 | ENST00000364992 | 102 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| MUC1 | P15941 | AC117470.1-201 | ENST00000381974 | 330 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| MUC1 | P15941 | SNORA72.4-201 | ENST00000384174 | 132 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| MUC1 | P15941 | MIR215-201 | ENST00000384858 | 110 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| MUC1 | P15941 | MIR452-201 | ENST00000385020 | 85 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| MUC1 | P15941 | RNU6ATAC31P-201 | ENST00000408513 | 126 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| MUC1 | P15941 | MIR1276-201 | ENST00000408707 | 83 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| MUC1 | P15941 | LINC01399-202 | ENST00000458450 | 244 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| MUC1 | P15941 | NDUFA4P2-201 | ENST00000489989 | 244 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| MUC1 | P15941 | AC017015.2-201 | ENST00000497946 | 376 nt | TSL 2 BASIC | 0.72 | □□□□□ -2.29 | | |
| MUC1 | P15941 | AC122707.1-201 | ENST00000502882 | 219 nt | TSL 2 BASIC | 0.72 | □□□□□ -2.29 | | |
| MUC1 | P15941 | RNU6-764P-201 | ENST00000516396 | 105 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| MUC1 | P15941 | SNORD111.1-201 | ENST00000516421 | 86 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| MUC1 | P15941 | RNU6-1153P-201 | ENST00000516760 | 105 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| MUC1 | P15941 | SNORA70.22-201 | ENST00000517160 | 124 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| MUC1 | P15941 | Y_RNA.721-201 | ENST00000517207 | 102 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| MUC1 | P15941 | MIR4661-201 | ENST00000582720 | 75 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| MUC1 | P15941 | AL357312.1-201 | ENST00000603879 | 298 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| MUC1 | P15941 | snoU2_19.2-201 | ENST00000363024 | 80 nt | BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | Y_RNA.136-201 | ENST00000363444 | 102 nt | BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | snoU2-30.1-201 | ENST00000365012 | 70 nt | BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | RNU6-969P-201 | ENST00000383900 | 105 nt | BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | Y_RNA.569-201 | ENST00000384749 | 103 nt | BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | TRAJ3-201 | ENST00000390534 | 62 nt | APPRIS P1 BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | SNORA36B-201 | ENST00000410438 | 131 nt | BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | RPL21P38-201 | ENST00000418090 | 167 nt | BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | POLR2J4-204 | ENST00000418424 | 324 nt | BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | AJ239322.2-201 | ENST00000421696 | 575 nt | TSL 5 BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | MTCO1P5-201 | ENST00000433573 | 344 nt | BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | AL138808.1-201 | ENST00000441428 | 371 nt | TSL 2 BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | RPS26P48-201 | ENST00000491713 | 339 nt | BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | MRPS35P2-201 | ENST00000508242 | 191 nt | BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | Y_RNA.701-201 | ENST00000516812 | 110 nt | BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | SNORA18.7-201 | ENST00000516910 | 131 nt | BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | AC131281.1-201 | ENST00000522984 | 164 nt | BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | AC107973.1-201 | ENST00000530249 | 576 nt | TSL 4 BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | AC113195.1-201 | ENST00000579952 | 141 nt | BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | MIR4680-201 | ENST00000580906 | 66 nt | BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | FAM71BP1-201 | ENST00000604431 | 523 nt | BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | AC211469.2-201 | ENST00000605461 | 205 nt | BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | MIR6504-201 | ENST00000613520 | 61 nt | BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | MIR8070-201 | ENST00000616510 | 88 nt | BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | SENP7-201 | ENST00000314261 | 4736 nt | APPRIS ALT2 TSL 1 (best) BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | AC068700.1-201 | ENST00000565862 | 3754 nt | BASIC | 0.71 | □□□□□ -2.3 | | |
| MUC1 | P15941 | RNU4-90P-201 | ENST00000362773 | 141 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| MUC1 | P15941 | Y_RNA.164-201 | ENST00000363709 | 102 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| MUC1 | P15941 | RNU6-770P-201 | ENST00000363929 | 105 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| MUC1 | P15941 | SNORD114-2-201 | ENST00000363953 | 78 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| MUC1 | P15941 | Y_RNA.210-201 | ENST00000364161 | 110 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| MUC1 | P15941 | RNU1-93P-201 | ENST00000364704 | 169 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| MUC1 | P15941 | SNORA25.9-201 | ENST00000365087 | 128 nt | BASIC | 0.7 | □□□□□ -2.3 | | |