Protein–RNA interactions for Protein: P14780

MMP9, Matrix metalloproteinase-9, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9P14780 RNU6-1007P-201ENST00000516586 107 ntBASIC1.28□□□□□ -2.2
MMP9P14780 SNORA27.4-201ENST00000516650 95 ntBASIC1.28□□□□□ -2.2
MMP9P14780 SNORD53B-201ENST00000577887 78 ntBASIC1.28□□□□□ -2.2
MMP9P14780 AC013791.1-201ENST00000616619 62 ntBASIC1.28□□□□□ -2.2
MMP9P14780 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
MMP9P14780 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.21
MMP9P14780 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
MMP9P14780 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
MMP9P14780 RNU1-42P-201ENST00000364033 160 ntBASIC1.27□□□□□ -2.21
MMP9P14780 Y_RNA.242-201ENST00000364473 110 ntBASIC1.27□□□□□ -2.21
MMP9P14780 RNU6-60P-201ENST00000364792 103 ntBASIC1.27□□□□□ -2.21
MMP9P14780 MIR136-201ENST00000385207 82 ntBASIC1.27□□□□□ -2.21
MMP9P14780 Y_RNA.637-201ENST00000459424 114 ntBASIC1.27□□□□□ -2.21
MMP9P14780 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.27□□□□□ -2.21
MMP9P14780 RNU6-1338P-201ENST00000516328 91 ntBASIC1.27□□□□□ -2.21
MMP9P14780 AL645939.4-201ENST00000604495 135 ntBASIC1.27□□□□□ -2.21
MMP9P14780 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
MMP9P14780 AL442644.1-201ENST00000454390 3105 ntBASIC1.27□□□□□ -2.21
MMP9P14780 UBE2WP1-201ENST00000362030 340 ntBASIC1.26□□□□□ -2.21
MMP9P14780 Y_RNA.16-201ENST00000362421 102 ntBASIC1.26□□□□□ -2.21
MMP9P14780 RNU6-694P-201ENST00000364071 147 ntBASIC1.26□□□□□ -2.21
MMP9P14780 MIR606-201ENST00000384851 96 ntBASIC1.26□□□□□ -2.21
MMP9P14780 MIR517C-201ENST00000385103 95 ntBASIC1.26□□□□□ -2.21
MMP9P14780 RNU6-1054P-201ENST00000411293 104 ntBASIC1.26□□□□□ -2.21
MMP9P14780 BTF3P4-201ENST00000418852 495 ntBASIC1.26□□□□□ -2.21
MMP9P14780 AC015922.2-201ENST00000435593 184 ntBASIC1.26□□□□□ -2.21
MMP9P14780 SNORD111.1-201ENST00000516421 86 ntBASIC1.26□□□□□ -2.21
MMP9P14780 AC090142.3-201ENST00000519012 385 ntBASIC1.26□□□□□ -2.21
MMP9P14780 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.26□□□□□ -2.21
MMP9P14780 RPL23AP91-201ENST00000569211 455 ntBASIC1.26□□□□□ -2.21
MMP9P14780 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.26□□□□□ -2.21
MMP9P14780 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
MMP9P14780 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
MMP9P14780 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
MMP9P14780 MIR378A-201ENST00000362177 66 ntBASIC1.25□□□□□ -2.21
MMP9P14780 MIR26B-201ENST00000362251 77 ntBASIC1.25□□□□□ -2.21
MMP9P14780 Y_RNA.217-201ENST00000364214 105 ntBASIC1.25□□□□□ -2.21
MMP9P14780 RNU6-442P-201ENST00000383968 104 ntBASIC1.25□□□□□ -2.21
MMP9P14780 MIR516B2-201ENST00000385190 85 ntBASIC1.25□□□□□ -2.21
MMP9P14780 MIR802-201ENST00000390235 94 ntBASIC1.25□□□□□ -2.21
MMP9P14780 SNORA67.6-201ENST00000391093 99 ntBASIC1.25□□□□□ -2.21
MMP9P14780 MIR1323-201ENST00000408090 73 ntBASIC1.25□□□□□ -2.21
MMP9P14780 AP1B1P2-201ENST00000416196 106 ntBASIC1.25□□□□□ -2.21
MMP9P14780 BTF3P11-201ENST00000426582 477 ntBASIC1.25□□□□□ -2.21
MMP9P14780 MTND5P22-201ENST00000458380 195 ntBASIC1.25□□□□□ -2.21
MMP9P14780 Y_RNA.641-201ENST00000459414 105 ntBASIC1.25□□□□□ -2.21
MMP9P14780 NDUFA4P2-201ENST00000489989 244 ntBASIC1.25□□□□□ -2.21
MMP9P14780 RNU6-635P-201ENST00000516651 102 ntBASIC1.25□□□□□ -2.21
MMP9P14780 MIR5692C2-201ENST00000577959 77 ntBASIC1.25□□□□□ -2.21
MMP9P14780 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
MMP9P14780 RNA5SP327-201ENST00000362494 101 ntBASIC1.24□□□□□ -2.21
MMP9P14780 Y_RNA.145-201ENST00000363527 102 ntBASIC1.24□□□□□ -2.21
MMP9P14780 RNU6-662P-201ENST00000384253 104 ntBASIC1.24□□□□□ -2.21
MMP9P14780 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.24□□□□□ -2.21
MMP9P14780 SNORD11-201ENST00000459124 84 ntBASIC1.24□□□□□ -2.21
MMP9P14780 TRBVB-201ENST00000477100 408 ntBASIC1.24□□□□□ -2.21
MMP9P14780 SNORA31.4-201ENST00000516049 129 ntBASIC1.24□□□□□ -2.21
MMP9P14780 RNU6-947P-201ENST00000516264 106 ntBASIC1.24□□□□□ -2.21
MMP9P14780 RNU6-570P-201ENST00000517051 105 ntBASIC1.24□□□□□ -2.21
MMP9P14780 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.24□□□□□ -2.21
MMP9P14780 MIR4498-201ENST00000577599 66 ntBASIC1.24□□□□□ -2.21
MMP9P14780 AC008507.4-201ENST00000585464 127 ntBASIC1.24□□□□□ -2.21
MMP9P14780 AL512598.1-201ENST00000610158 273 ntBASIC1.24□□□□□ -2.21
MMP9P14780 MIR7974-201ENST00000615835 79 ntBASIC1.24□□□□□ -2.21
MMP9P14780 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.24□□□□□ -2.21
MMP9P14780 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.24□□□□□ -2.21
MMP9P14780 U6.104-201ENST00000637979 90 ntBASIC1.24□□□□□ -2.21
MMP9P14780 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.23□□□□□ -2.21
MMP9P14780 SNORA63C-201ENST00000364578 129 ntBASIC1.23□□□□□ -2.21
MMP9P14780 SNORD38C-201ENST00000384381 69 ntBASIC1.23□□□□□ -2.21
MMP9P14780 MIR1304-201ENST00000408243 91 ntBASIC1.23□□□□□ -2.21
MMP9P14780 MIR1278-201ENST00000408753 81 ntBASIC1.23□□□□□ -2.21
MMP9P14780 AC245047.7-201ENST00000440265 293 ntBASIC1.23□□□□□ -2.21
MMP9P14780 RNU7-95P-201ENST00000459222 64 ntBASIC1.23□□□□□ -2.21
MMP9P14780 SNORA31.2-201ENST00000516019 134 ntBASIC1.23□□□□□ -2.21
MMP9P14780 SNORA74.3-201ENST00000517108 154 ntBASIC1.23□□□□□ -2.21
MMP9P14780 SNORA31.24-201ENST00000517232 57 ntBASIC1.23□□□□□ -2.21
MMP9P14780 DEFB108E-201ENST00000524692 240 ntBASIC1.23□□□□□ -2.21
MMP9P14780 DNAJC19P9-201ENST00000555084 351 ntBASIC1.23□□□□□ -2.21
MMP9P14780 AC019288.1-201ENST00000557918 224 ntBASIC1.23□□□□□ -2.21
MMP9P14780 snoU13.31-201ENST00000607291 104 ntBASIC1.23□□□□□ -2.21
MMP9P14780 MIR548F4-201ENST00000408515 105 ntBASIC1.22□□□□□ -2.21
MMP9P14780 AC023449.1-201ENST00000454464 154 ntBASIC1.22□□□□□ -2.21
MMP9P14780 MTATP8P1-201ENST00000467115 207 ntBASIC1.22□□□□□ -2.21
MMP9P14780 SCARNA24.2-201ENST00000516968 130 ntBASIC1.22□□□□□ -2.21
MMP9P14780 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.22□□□□□ -2.21
MMP9P14780 AP001282.2-201ENST00000616149 309 ntBASIC1.22□□□□□ -2.21
MMP9P14780 MIR367-201ENST00000362299 68 ntBASIC1.21□□□□□ -2.22
MMP9P14780 Y_RNA.14-201ENST00000362415 103 ntBASIC1.21□□□□□ -2.22
MMP9P14780 Y_RNA.275-201ENST00000364726 110 ntBASIC1.21□□□□□ -2.22
MMP9P14780 SNORA25.8-201ENST00000364831 128 ntBASIC1.21□□□□□ -2.22
MMP9P14780 Y_RNA.376-201ENST00000365638 108 ntBASIC1.21□□□□□ -2.22
MMP9P14780 SNORA25-201ENST00000384384 134 ntBASIC1.21□□□□□ -2.22
MMP9P14780 RNA5SP496-201ENST00000391240 109 ntBASIC1.21□□□□□ -2.22
MMP9P14780 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.21□□□□□ -2.22
MMP9P14780 SNRPGP14-201ENST00000435400 219 ntBASIC1.21□□□□□ -2.22
MMP9P14780 AC048334.1-201ENST00000477975 159 ntBASIC1.21□□□□□ -2.22
MMP9P14780 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.21□□□□□ -2.22
MMP9P14780 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.21□□□□□ -2.22
MMP9P14780 RNU7-43P-201ENST00000516554 64 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms