Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 MIR6513-201ENST00000621188 64 ntBASIC0.6□□□□□ -2.31
CCDC130P13994 U6.92-201ENST00000636464 89 ntBASIC0.6□□□□□ -2.31
CCDC130P13994 AC134026.1-201ENST00000623249 2239 ntBASIC0.6□□□□□ -2.31
CCDC130P13994 SNORD114-23-201ENST00000363536 72 ntBASIC0.59□□□□□ -2.31
CCDC130P13994 RNU6-654P-201ENST00000364373 107 ntBASIC0.59□□□□□ -2.31
CCDC130P13994 Y_RNA.310-201ENST00000365063 113 ntBASIC0.59□□□□□ -2.31
CCDC130P13994 MIR559-201ENST00000385188 96 ntBASIC0.59□□□□□ -2.31
CCDC130P13994 Y_RNA.619-201ENST00000410951 90 ntBASIC0.59□□□□□ -2.31
CCDC130P13994 AC098869.1-201ENST00000481627 292 ntBASIC0.59□□□□□ -2.31
CCDC130P13994 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.59□□□□□ -2.31
CCDC130P13994 MIR548AR-201ENST00000582191 57 ntBASIC0.59□□□□□ -2.31
CCDC130P13994 AL512605.2-201ENST00000592972 256 ntBASIC0.59□□□□□ -2.31
CCDC130P13994 MIR6516-201ENST00000630554 81 ntBASIC0.59□□□□□ -2.31
CCDC130P13994 RNU6-1323P-201ENST00000384025 107 ntBASIC0.58□□□□□ -2.32
CCDC130P13994 Y_RNA.505-201ENST00000384489 102 ntBASIC0.58□□□□□ -2.32
CCDC130P13994 RNU6-855P-201ENST00000410395 104 ntBASIC0.58□□□□□ -2.32
CCDC130P13994 AC098934.3-201ENST00000430450 190 ntBASIC0.58□□□□□ -2.32
CCDC130P13994 AC098614.3-201ENST00000438957 440 ntBASIC0.58□□□□□ -2.32
CCDC130P13994 AC005042.3-201ENST00000453230 174 ntBASIC0.58□□□□□ -2.32
CCDC130P13994 RNU4-54P-201ENST00000516428 129 ntBASIC0.58□□□□□ -2.32
CCDC130P13994 RNA5SP121-201ENST00000516537 101 ntBASIC0.58□□□□□ -2.32
CCDC130P13994 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.58□□□□□ -2.32
CCDC130P13994 VN1R91P-201ENST00000594377 169 ntBASIC0.58□□□□□ -2.32
CCDC130P13994 7SK.10-201ENST00000621414 298 ntBASIC0.58□□□□□ -2.32
CCDC130P13994 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.58□□□□□ -2.32
CCDC130P13994 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
CCDC130P13994 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
CCDC130P13994 Y_RNA.148-201ENST00000363557 117 ntBASIC0.57□□□□□ -2.32
CCDC130P13994 Y_RNA.259-201ENST00000364619 101 ntBASIC0.57□□□□□ -2.32
CCDC130P13994 RNU6-1175P-201ENST00000365200 107 ntBASIC0.57□□□□□ -2.32
CCDC130P13994 Y_RNA.387-201ENST00000383918 102 ntBASIC0.57□□□□□ -2.32
CCDC130P13994 Y_RNA.570-201ENST00000384750 101 ntBASIC0.57□□□□□ -2.32
CCDC130P13994 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.57□□□□□ -2.32
CCDC130P13994 AC091951.2-201ENST00000500762 203 ntBASIC0.57□□□□□ -2.32
CCDC130P13994 RNU11-2P-201ENST00000516898 142 ntBASIC0.57□□□□□ -2.32
CCDC130P13994 RNU7-116P-201ENST00000516940 62 ntBASIC0.57□□□□□ -2.32
CCDC130P13994 MIR4423-201ENST00000580922 80 ntBASIC0.57□□□□□ -2.32
CCDC130P13994 AL355073.2-201ENST00000612106 557 ntBASIC0.57□□□□□ -2.32
CCDC130P13994 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
CCDC130P13994 SNORD81.1-201ENST00000363064 77 ntBASIC0.56□□□□□ -2.32
CCDC130P13994 Y_RNA.374-201ENST00000365606 101 ntBASIC0.56□□□□□ -2.32
CCDC130P13994 RNU6-1040P-201ENST00000383974 107 ntBASIC0.56□□□□□ -2.32
CCDC130P13994 AL590004.1-201ENST00000405321 300 ntBASIC0.56□□□□□ -2.32
CCDC130P13994 AF228730.4-201ENST00000421457 183 ntBASIC0.56□□□□□ -2.32
CCDC130P13994 RNU6-1110P-201ENST00000516462 101 ntBASIC0.56□□□□□ -2.32
CCDC130P13994 SNORA20.3-201ENST00000516880 132 ntBASIC0.56□□□□□ -2.32
CCDC130P13994 AC087685.1-201ENST00000587507 141 ntBASIC0.56□□□□□ -2.32
CCDC130P13994 AC010205.1-201ENST00000616668 449 ntBASIC0.56□□□□□ -2.32
CCDC130P13994 AC010487.4-201ENST00000637027 61 ntBASIC0.56□□□□□ -2.32
CCDC130P13994 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
CCDC130P13994 RNA5SP457-201ENST00000363657 124 ntBASIC0.55□□□□□ -2.32
CCDC130P13994 SNORD14E-201ENST00000364009 85 ntBASIC0.55□□□□□ -2.32
CCDC130P13994 Y_RNA.341-201ENST00000365341 102 ntBASIC0.55□□□□□ -2.32
CCDC130P13994 Y_RNA.456-201ENST00000384232 111 ntBASIC0.55□□□□□ -2.32
CCDC130P13994 RNY4P36-201ENST00000391116 96 ntBASIC0.55□□□□□ -2.32
CCDC130P13994 SNORD111-201ENST00000408139 94 ntBASIC0.55□□□□□ -2.32
CCDC130P13994 RNA5SP95-201ENST00000410319 137 ntBASIC0.55□□□□□ -2.32
CCDC130P13994 AC138393.2-201ENST00000414742 246 ntBASIC0.55□□□□□ -2.32
CCDC130P13994 AC024067.1-201ENST00000426199 223 ntBASIC0.55□□□□□ -2.32
CCDC130P13994 SNRPGP14-201ENST00000435400 219 ntBASIC0.55□□□□□ -2.32
CCDC130P13994 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.55□□□□□ -2.32
CCDC130P13994 NDUFA4P2-201ENST00000489989 244 ntBASIC0.55□□□□□ -2.32
CCDC130P13994 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.55□□□□□ -2.32
CCDC130P13994 RNU6-229P-201ENST00000516614 102 ntBASIC0.55□□□□□ -2.32
CCDC130P13994 RNU6-699P-201ENST00000517081 110 ntBASIC0.55□□□□□ -2.32
CCDC130P13994 AC006600.1-201ENST00000572529 153 ntBASIC0.55□□□□□ -2.32
CCDC130P13994 AC025627.3-201ENST00000582078 182 ntBASIC0.55□□□□□ -2.32
CCDC130P13994 POLR3GP1-201ENST00000594073 261 ntBASIC0.55□□□□□ -2.32
CCDC130P13994 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.55□□□□□ -2.32
CCDC130P13994 MIR4251-201ENST00000635819 61 ntBASIC0.55□□□□□ -2.32
CCDC130P13994 MTND4LP32-201ENST00000636111 270 ntBASIC0.55□□□□□ -2.32
CCDC130P13994 MIR924-201ENST00000638017 53 ntBASIC0.55□□□□□ -2.32
CCDC130P13994 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
CCDC130P13994 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
CCDC130P13994 RNA5SP347-201ENST00000362445 119 ntBASIC0.54□□□□□ -2.32
CCDC130P13994 Y_RNA.142-201ENST00000363491 102 ntBASIC0.54□□□□□ -2.32
CCDC130P13994 Y_RNA.384-201ENST00000383909 102 ntBASIC0.54□□□□□ -2.32
CCDC130P13994 Y_RNA.428-201ENST00000384078 102 ntBASIC0.54□□□□□ -2.32
CCDC130P13994 Y_RNA.462-201ENST00000384268 102 ntBASIC0.54□□□□□ -2.32
CCDC130P13994 SNORD38C-201ENST00000384381 69 ntBASIC0.54□□□□□ -2.32
CCDC130P13994 MIR570-201ENST00000384917 97 ntBASIC0.54□□□□□ -2.32
CCDC130P13994 MIR936-201ENST00000401264 98 ntBASIC0.54□□□□□ -2.32
CCDC130P13994 AC244098.3-201ENST00000424803 96 ntBASIC0.54□□□□□ -2.32
CCDC130P13994 AC092628.1-201ENST00000436250 252 ntBASIC0.54□□□□□ -2.32
CCDC130P13994 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.54□□□□□ -2.32
CCDC130P13994 SNORD116.3-201ENST00000517176 78 ntBASIC0.54□□□□□ -2.32
CCDC130P13994 AP003357.1-201ENST00000604497 148 ntBASIC0.54□□□□□ -2.32
CCDC130P13994 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.54□□□□□ -2.32
CCDC130P13994 MIR4272-201ENST00000635924 64 ntBASIC0.54□□□□□ -2.32
CCDC130P13994 AC099654.14-201ENST00000638599 341 ntBASIC0.54□□□□□ -2.32
CCDC130P13994 Y_RNA.203-201ENST00000364106 102 ntBASIC0.53□□□□□ -2.32
CCDC130P13994 SNORD113.3-201ENST00000364630 78 ntBASIC0.53□□□□□ -2.32
CCDC130P13994 U8.7-201ENST00000364940 136 ntBASIC0.53□□□□□ -2.32
CCDC130P13994 SNORD116-29-201ENST00000384516 83 ntBASIC0.53□□□□□ -2.32
CCDC130P13994 AC067940.1-201ENST00000458411 300 ntBASIC0.53□□□□□ -2.32
CCDC130P13994 RNU6-277P-201ENST00000516272 106 ntBASIC0.53□□□□□ -2.32
CCDC130P13994 AC024405.2-202ENST00000532731 184 ntBASIC0.53□□□□□ -2.32
CCDC130P13994 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.53□□□□□ -2.32
CCDC130P13994 DEFB117-201ENST00000602356 141 ntBASIC0.53□□□□□ -2.32
CCDC130P13994 Y_RNA.772-201ENST00000606692 102 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms