Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 HMGN1P7-201ENST00000491722 313 ntBASIC1.61□□□□□ -2.15
CDH1P12830 Y_RNA.674-201ENST00000516362 113 ntBASIC1.61□□□□□ -2.15
CDH1P12830 SNORA25.15-201ENST00000516487 89 ntBASIC1.61□□□□□ -2.15
CDH1P12830 AL021707.8-201ENST00000609428 183 ntBASIC1.61□□□□□ -2.15
CDH1P12830 AL773524.1-201ENST00000614065 229 ntBASIC1.61□□□□□ -2.15
CDH1P12830 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
CDH1P12830 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CDH1P12830 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CDH1P12830 RNU6-1209P-201ENST00000363655 107 ntBASIC1.6□□□□□ -2.15
CDH1P12830 Y_RNA.229-201ENST00000364347 113 ntBASIC1.6□□□□□ -2.15
CDH1P12830 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.6□□□□□ -2.15
CDH1P12830 RNU2-64P-201ENST00000411315 191 ntBASIC1.6□□□□□ -2.15
CDH1P12830 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.6□□□□□ -2.15
CDH1P12830 AL138752.1-201ENST00000452964 351 ntBASIC1.6□□□□□ -2.15
CDH1P12830 SNORD11-201ENST00000459124 84 ntBASIC1.6□□□□□ -2.15
CDH1P12830 OR9P1P-201ENST00000496431 281 ntBASIC1.6□□□□□ -2.15
CDH1P12830 SCARNA8-201ENST00000515924 131 ntBASIC1.6□□□□□ -2.15
CDH1P12830 RNA5SP481-201ENST00000516814 122 ntBASIC1.6□□□□□ -2.15
CDH1P12830 SNORA81.3-201ENST00000517283 198 ntBASIC1.6□□□□□ -2.15
CDH1P12830 AC022254.1-201ENST00000567857 235 ntBASIC1.6□□□□□ -2.15
CDH1P12830 MIR502-201ENST00000606349 86 ntBASIC1.6□□□□□ -2.15
CDH1P12830 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.6□□□□□ -2.15
CDH1P12830 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CDH1P12830 RN7SKP200-201ENST00000410564 320 ntBASIC1.59□□□□□ -2.15
CDH1P12830 AC244636.1-201ENST00000421152 228 ntBASIC1.59□□□□□ -2.15
CDH1P12830 STAG3L5P-204ENST00000443759 179 ntBASIC1.59□□□□□ -2.15
CDH1P12830 snoU13.27-201ENST00000459278 104 ntBASIC1.59□□□□□ -2.15
CDH1P12830 RNA5SP57-201ENST00000459463 123 ntBASIC1.59□□□□□ -2.15
CDH1P12830 RN7SKP164-201ENST00000516138 266 ntBASIC1.59□□□□□ -2.15
CDH1P12830 RNU7-28P-201ENST00000516759 62 ntBASIC1.59□□□□□ -2.15
CDH1P12830 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
CDH1P12830 RPL23AP91-201ENST00000569211 455 ntBASIC1.59□□□□□ -2.15
CDH1P12830 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.59□□□□□ -2.15
CDH1P12830 MIR2681-201ENST00000581814 105 ntBASIC1.59□□□□□ -2.15
CDH1P12830 MIR4298-201ENST00000584380 73 ntBASIC1.59□□□□□ -2.15
CDH1P12830 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.59□□□□□ -2.16
CDH1P12830 Y_RNA.29-201ENST00000362570 113 ntBASIC1.58□□□□□ -2.16
CDH1P12830 RNU6-1020P-201ENST00000363684 107 ntBASIC1.58□□□□□ -2.16
CDH1P12830 Y_RNA.265-201ENST00000364677 108 ntBASIC1.58□□□□□ -2.16
CDH1P12830 Y_RNA.435-201ENST00000384095 112 ntBASIC1.58□□□□□ -2.16
CDH1P12830 RNU6-950P-201ENST00000384651 107 ntBASIC1.58□□□□□ -2.16
CDH1P12830 RNU6-1031P-201ENST00000384773 107 ntBASIC1.58□□□□□ -2.16
CDH1P12830 MIR522-201ENST00000385071 87 ntBASIC1.58□□□□□ -2.16
CDH1P12830 MIR616-201ENST00000385293 97 ntBASIC1.58□□□□□ -2.16
CDH1P12830 RNA5SP496-201ENST00000391240 109 ntBASIC1.58□□□□□ -2.16
CDH1P12830 RNA5SP482-201ENST00000391269 118 ntBASIC1.58□□□□□ -2.16
CDH1P12830 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.58□□□□□ -2.16
CDH1P12830 SNRPGP10-201ENST00000432323 225 ntBASIC1.58□□□□□ -2.16
CDH1P12830 MTND5P15-201ENST00000434246 349 ntBASIC1.58□□□□□ -2.16
CDH1P12830 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.58□□□□□ -2.16
CDH1P12830 NDUFA4P2-201ENST00000489989 244 ntBASIC1.58□□□□□ -2.16
CDH1P12830 AC099513.1-201ENST00000490423 301 ntBASIC1.58□□□□□ -2.16
CDH1P12830 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.58□□□□□ -2.16
CDH1P12830 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.58□□□□□ -2.16
CDH1P12830 RNU6-453P-201ENST00000516819 85 ntBASIC1.58□□□□□ -2.16
CDH1P12830 AC022559.1-201ENST00000520905 205 ntBASIC1.58□□□□□ -2.16
CDH1P12830 MIR4762-201ENST00000585261 75 ntBASIC1.58□□□□□ -2.16
CDH1P12830 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CDH1P12830 MIR126-201ENST00000362291 85 ntBASIC1.57□□□□□ -2.16
CDH1P12830 Y_RNA.7-201ENST00000362352 102 ntBASIC1.57□□□□□ -2.16
CDH1P12830 Y_RNA.238-201ENST00000364441 102 ntBASIC1.57□□□□□ -2.16
CDH1P12830 U8.5-201ENST00000364528 136 ntBASIC1.57□□□□□ -2.16
CDH1P12830 MT-TT-201ENST00000387460 66 ntBASIC1.57□□□□□ -2.16
CDH1P12830 RNU6-360P-201ENST00000390944 104 ntBASIC1.57□□□□□ -2.16
CDH1P12830 Y_RNA.793-201ENST00000411222 111 ntBASIC1.57□□□□□ -2.16
CDH1P12830 RPL23AP6-201ENST00000446637 472 ntBASIC1.57□□□□□ -2.16
CDH1P12830 AC245047.8-201ENST00000456455 284 ntBASIC1.57□□□□□ -2.16
CDH1P12830 RNU7-120P-201ENST00000459334 63 ntBASIC1.57□□□□□ -2.16
CDH1P12830 RNU2-4P-201ENST00000606190 192 ntBASIC1.57□□□□□ -2.16
CDH1P12830 SNORA28-201ENST00000606769 126 ntBASIC1.57□□□□□ -2.16
CDH1P12830 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.57□□□□□ -2.16
CDH1P12830 AL391903.3-201ENST00000612158 163 ntBASIC1.57□□□□□ -2.16
CDH1P12830 AC021506.2-201ENST00000612354 169 ntBASIC1.57□□□□□ -2.16
CDH1P12830 JPX_2.1-201ENST00000614161 69 ntBASIC1.57□□□□□ -2.16
CDH1P12830 AC004792.1-201ENST00000614523 137 ntBASIC1.57□□□□□ -2.16
CDH1P12830 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CDH1P12830 MIRLET7C-201ENST00000362160 84 ntBASIC1.56□□□□□ -2.16
CDH1P12830 RNA5SP190-201ENST00000365222 118 ntBASIC1.56□□□□□ -2.16
CDH1P12830 Y_RNA.571-201ENST00000384753 98 ntBASIC1.56□□□□□ -2.16
CDH1P12830 AL034345.1-201ENST00000407768 123 ntBASIC1.56□□□□□ -2.16
CDH1P12830 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.56□□□□□ -2.16
CDH1P12830 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.56□□□□□ -2.16
CDH1P12830 AP002392.1-201ENST00000537692 208 ntBASIC1.56□□□□□ -2.16
CDH1P12830 MIR4709-201ENST00000577272 72 ntBASIC1.56□□□□□ -2.16
CDH1P12830 MIR4713-201ENST00000582691 75 ntBASIC1.56□□□□□ -2.16
CDH1P12830 AL049861.1-201ENST00000603130 150 ntBASIC1.56□□□□□ -2.16
CDH1P12830 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.55□□□□□ -2.16
CDH1P12830 SNORD68-201ENST00000363214 84 ntBASIC1.55□□□□□ -2.16
CDH1P12830 Y_RNA.121-201ENST00000363309 113 ntBASIC1.55□□□□□ -2.16
CDH1P12830 Y_RNA.233-201ENST00000364407 101 ntBASIC1.55□□□□□ -2.16
CDH1P12830 RNU6-424P-201ENST00000384367 105 ntBASIC1.55□□□□□ -2.16
CDH1P12830 MIR764-201ENST00000390811 85 ntBASIC1.55□□□□□ -2.16
CDH1P12830 AL606845.1-201ENST00000404881 255 ntBASIC1.55□□□□□ -2.16
CDH1P12830 FTH1P12-201ENST00000432137 551 ntBASIC1.55□□□□□ -2.16
CDH1P12830 AL591806.2-201ENST00000433122 173 ntBASIC1.55□□□□□ -2.16
CDH1P12830 RNU7-34P-201ENST00000459394 64 ntBASIC1.55□□□□□ -2.16
CDH1P12830 RNU6-548P-201ENST00000517083 115 ntBASIC1.55□□□□□ -2.16
CDH1P12830 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.55□□□□□ -2.16
CDH1P12830 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.55□□□□□ -2.16
CDH1P12830 MIR4255-201ENST00000579351 72 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 189.9 ms