Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 RNU6-102P-201ENST00000384485 104 ntBASIC0.96□□□□□ -2.26
VIMP08670 MIR200A-201ENST00000384875 90 ntBASIC0.96□□□□□ -2.26
VIMP08670 RNU6-823P-201ENST00000391042 103 ntBASIC0.96□□□□□ -2.26
VIMP08670 RNU6-1248P-201ENST00000391096 64 ntBASIC0.96□□□□□ -2.26
VIMP08670 RNU6-191P-201ENST00000516295 94 ntBASIC0.96□□□□□ -2.26
VIMP08670 AP003716.2-201ENST00000528260 108 ntBASIC0.96□□□□□ -2.26
VIMP08670 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.96□□□□□ -2.26
VIMP08670 AC087685.1-201ENST00000587507 141 ntBASIC0.96□□□□□ -2.26
VIMP08670 C8orf59P2-201ENST00000603441 271 ntBASIC0.96□□□□□ -2.26
VIMP08670 AC104695.3-201ENST00000604052 296 ntBASIC0.96□□□□□ -2.26
VIMP08670 RAC1P9-201ENST00000604990 392 ntBASIC0.96□□□□□ -2.26
VIMP08670 AL020996.3-201ENST00000606617 222 ntBASIC0.96□□□□□ -2.26
VIMP08670 Y_RNA.183-201ENST00000363882 113 ntBASIC0.95□□□□□ -2.26
VIMP08670 RNU4-38P-201ENST00000364472 129 ntBASIC0.95□□□□□ -2.26
VIMP08670 SNORA63.7-201ENST00000365579 123 ntBASIC0.95□□□□□ -2.26
VIMP08670 RNU6-474P-201ENST00000384243 107 ntBASIC0.95□□□□□ -2.26
VIMP08670 SNORD38C-201ENST00000384381 69 ntBASIC0.95□□□□□ -2.26
VIMP08670 MIR802-201ENST00000390235 94 ntBASIC0.95□□□□□ -2.26
VIMP08670 SNORA26.5-201ENST00000391215 123 ntBASIC0.95□□□□□ -2.26
VIMP08670 SNORA11.2-201ENST00000408318 127 ntBASIC0.95□□□□□ -2.26
VIMP08670 MIR1185-1-201ENST00000408598 86 ntBASIC0.95□□□□□ -2.26
VIMP08670 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.95□□□□□ -2.26
VIMP08670 RNU6-897P-201ENST00000517135 105 ntBASIC0.95□□□□□ -2.26
VIMP08670 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.95□□□□□ -2.26
VIMP08670 RPL23AP91-201ENST00000569211 455 ntBASIC0.95□□□□□ -2.26
VIMP08670 MIR4661-201ENST00000582720 75 ntBASIC0.95□□□□□ -2.26
VIMP08670 AC005357.1-201ENST00000588399 301 ntBASIC0.95□□□□□ -2.26
VIMP08670 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.95□□□□□ -2.26
VIMP08670 AL160413.1-201ENST00000622780 310 ntBASIC0.95□□□□□ -2.26
VIMP08670 MTND4P29-201ENST00000503122 1372 ntBASIC0.95□□□□□ -2.26
VIMP08670 AC134026.1-201ENST00000623249 2239 ntBASIC0.95□□□□□ -2.26
VIMP08670 Y_RNA.28-201ENST00000362554 111 ntBASIC0.94□□□□□ -2.26
VIMP08670 RNU6-674P-201ENST00000363831 107 ntBASIC0.94□□□□□ -2.26
VIMP08670 RNU6-442P-201ENST00000383968 104 ntBASIC0.94□□□□□ -2.26
VIMP08670 SNORD115-46-201ENST00000390982 71 ntBASIC0.94□□□□□ -2.26
VIMP08670 MIR942-201ENST00000401111 86 ntBASIC0.94□□□□□ -2.26
VIMP08670 POLR2J4-204ENST00000418424 324 ntBASIC0.94□□□□□ -2.26
VIMP08670 AC108667.1-201ENST00000428618 249 ntBASIC0.94□□□□□ -2.26
VIMP08670 HSPE1P25-201ENST00000455484 251 ntBASIC0.94□□□□□ -2.26
VIMP08670 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.94□□□□□ -2.26
VIMP08670 PDCD5P2-201ENST00000507570 312 ntBASIC0.94□□□□□ -2.26
VIMP08670 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.94□□□□□ -2.26
VIMP08670 MIR2681-201ENST00000581814 105 ntBASIC0.94□□□□□ -2.26
VIMP08670 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.94□□□□□ -2.26
VIMP08670 SEPT14P17-201ENST00000617978 177 ntBASIC0.94□□□□□ -2.26
VIMP08670 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.94□□□□□ -2.26
VIMP08670 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.94□□□□□ -2.26
VIMP08670 RNA5SP48-201ENST00000363969 126 ntBASIC0.93□□□□□ -2.26
VIMP08670 Y_RNA.389-201ENST00000383924 113 ntBASIC0.93□□□□□ -2.26
VIMP08670 Y_RNA.394-201ENST00000383942 103 ntBASIC0.93□□□□□ -2.26
VIMP08670 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
VIMP08670 MTCO2P33-201ENST00000402100 465 ntBASIC0.93□□□□□ -2.26
VIMP08670 MIR1252-201ENST00000408861 65 ntBASIC0.93□□□□□ -2.26
VIMP08670 RNU6-101P-201ENST00000410323 104 ntBASIC0.93□□□□□ -2.26
VIMP08670 SNRPGP14-201ENST00000435400 219 ntBASIC0.93□□□□□ -2.26
VIMP08670 RNU6-496P-201ENST00000516145 99 ntBASIC0.93□□□□□ -2.26
VIMP08670 MIR548AR-201ENST00000582191 57 ntBASIC0.93□□□□□ -2.26
VIMP08670 MIR4781-201ENST00000585250 76 ntBASIC0.93□□□□□ -2.26
VIMP08670 AC008507.4-201ENST00000585464 127 ntBASIC0.93□□□□□ -2.26
VIMP08670 RNU5E-4P-201ENST00000364931 120 ntBASIC0.92□□□□□ -2.26
VIMP08670 RNU1-36P-201ENST00000365130 165 ntBASIC0.92□□□□□ -2.26
VIMP08670 SNORD28B-201ENST00000390993 75 ntBASIC0.92□□□□□ -2.26
VIMP08670 Y_RNA.631-201ENST00000459607 101 ntBASIC0.92□□□□□ -2.26
VIMP08670 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.92□□□□□ -2.26
VIMP08670 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.92□□□□□ -2.26
VIMP08670 RN7SKP164-201ENST00000516138 266 ntBASIC0.92□□□□□ -2.26
VIMP08670 ACA64.5-201ENST00000516207 127 ntBASIC0.92□□□□□ -2.26
VIMP08670 RNU6-764P-201ENST00000516396 105 ntBASIC0.92□□□□□ -2.26
VIMP08670 MIR4524B-201ENST00000581569 115 ntBASIC0.92□□□□□ -2.26
VIMP08670 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.92□□□□□ -2.26
VIMP08670 RNU4-90P-201ENST00000362773 141 ntBASIC0.91□□□□□ -2.26
VIMP08670 Y_RNA.105-201ENST00000363182 111 ntBASIC0.91□□□□□ -2.26
VIMP08670 Y_RNA.136-201ENST00000363444 102 ntBASIC0.91□□□□□ -2.26
VIMP08670 RNU6-268P-201ENST00000364174 107 ntBASIC0.91□□□□□ -2.26
VIMP08670 RNU6-867P-201ENST00000364956 107 ntBASIC0.91□□□□□ -2.26
VIMP08670 Y_RNA.460-201ENST00000384255 102 ntBASIC0.91□□□□□ -2.26
VIMP08670 Y_RNA.569-201ENST00000384749 103 ntBASIC0.91□□□□□ -2.26
VIMP08670 SNORD72-201ENST00000390994 80 ntBASIC0.91□□□□□ -2.26
VIMP08670 AP1B1P2-201ENST00000416196 106 ntBASIC0.91□□□□□ -2.26
VIMP08670 SNORD11-201ENST00000459124 84 ntBASIC0.91□□□□□ -2.26
VIMP08670 MRPS35P2-201ENST00000508242 191 ntBASIC0.91□□□□□ -2.26
VIMP08670 RNU6-988P-201ENST00000519081 107 ntBASIC0.91□□□□□ -2.26
VIMP08670 AC023827.1-201ENST00000569247 97 ntBASIC0.91□□□□□ -2.26
VIMP08670 MIR4653-201ENST00000585107 83 ntBASIC0.91□□□□□ -2.26
VIMP08670 AC013244.2-201ENST00000603396 103 ntBASIC0.91□□□□□ -2.26
VIMP08670 AP000942.3-201ENST00000603702 160 ntBASIC0.91□□□□□ -2.26
VIMP08670 AC136443.5-201ENST00000603741 370 ntBASIC0.91□□□□□ -2.26
VIMP08670 Pinc.1-201ENST00000616452 154 ntBASIC0.91□□□□□ -2.26
VIMP08670 AC008133.2-201ENST00000624540 351 ntBASIC0.91□□□□□ -2.26
VIMP08670 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.91□□□□□ -2.26
VIMP08670 RNU6-899P-201ENST00000363947 107 ntBASIC0.9□□□□□ -2.27
VIMP08670 RNU6-763P-201ENST00000390865 106 ntBASIC0.9□□□□□ -2.27
VIMP08670 Y_RNA.721-201ENST00000517207 102 ntBASIC0.9□□□□□ -2.27
VIMP08670 AC104984.5-201ENST00000586878 94 ntBASIC0.9□□□□□ -2.27
VIMP08670 MIR4251-201ENST00000635819 61 ntBASIC0.9□□□□□ -2.27
VIMP08670 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
VIMP08670 Y_RNA.140-201ENST00000363474 103 ntBASIC0.89□□□□□ -2.27
VIMP08670 MIR146A-201ENST00000385201 99 ntBASIC0.89□□□□□ -2.27
VIMP08670 MIR764-201ENST00000390811 85 ntBASIC0.89□□□□□ -2.27
VIMP08670 AL603910.2-201ENST00000407268 136 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms