Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.28□□□□□ -2.36
COL4A2P08572 Y_RNA.101-201ENST00000363154 102 ntBASIC0.27□□□□□ -2.37
COL4A2P08572 Y_RNA.142-201ENST00000363491 102 ntBASIC0.27□□□□□ -2.37
COL4A2P08572 RNU6-1335P-201ENST00000365426 107 ntBASIC0.27□□□□□ -2.37
COL4A2P08572 Y_RNA.370-201ENST00000365589 108 ntBASIC0.27□□□□□ -2.37
COL4A2P08572 RNU6-470P-201ENST00000515954 104 ntBASIC0.27□□□□□ -2.37
COL4A2P08572 RNU6-911P-201ENST00000516523 104 ntBASIC0.27□□□□□ -2.37
COL4A2P08572 RNU6-1016P-201ENST00000516689 94 ntBASIC0.27□□□□□ -2.37
COL4A2P08572 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.27□□□□□ -2.37
COL4A2P08572 MIR4300-201ENST00000581016 96 ntBASIC0.27□□□□□ -2.37
COL4A2P08572 RBM11P1-201ENST00000604951 799 ntBASIC0.27□□□□□ -2.37
COL4A2P08572 AL355073.2-201ENST00000612106 557 ntBASIC0.27□□□□□ -2.37
COL4A2P08572 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.27□□□□□ -2.37
COL4A2P08572 SNORD18A-201ENST00000363753 72 ntBASIC0.27□□□□□ -2.37
COL4A2P08572 Y_RNA.476-201ENST00000384347 108 ntBASIC0.27□□□□□ -2.37
COL4A2P08572 Y_RNA.571-201ENST00000384753 98 ntBASIC0.27□□□□□ -2.37
COL4A2P08572 SNORD115-47-201ENST00000391226 86 ntBASIC0.27□□□□□ -2.37
COL4A2P08572 AL031003.1-201ENST00000404229 172 ntBASIC0.27□□□□□ -2.37
COL4A2P08572 MIR1302-7-201ENST00000408841 72 ntBASIC0.27□□□□□ -2.37
COL4A2P08572 RNU6-994P-201ENST00000410507 111 ntBASIC0.27□□□□□ -2.37
COL4A2P08572 MTCO2P12-201ENST00000427426 682 ntBASIC0.27□□□□□ -2.37
COL4A2P08572 SNRPGP10-201ENST00000432323 225 ntBASIC0.27□□□□□ -2.37
COL4A2P08572 MTND1P4-201ENST00000435196 415 ntBASIC0.27□□□□□ -2.37
COL4A2P08572 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.27□□□□□ -2.37
COL4A2P08572 AC067940.1-201ENST00000458411 300 ntBASIC0.27□□□□□ -2.37
COL4A2P08572 EIF1P4-201ENST00000572664 335 ntBASIC0.27□□□□□ -2.37
COL4A2P08572 AL355375.2-201ENST00000574825 175 ntBASIC0.27□□□□□ -2.37
COL4A2P08572 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.27□□□□□ -2.37
COL4A2P08572 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
COL4A2P08572 Y_RNA.3-201ENST00000362331 103 ntBASIC0.26□□□□□ -2.37
COL4A2P08572 Y_RNA.172-201ENST00000363765 102 ntBASIC0.26□□□□□ -2.37
COL4A2P08572 RNU6-580P-201ENST00000365159 107 ntBASIC0.26□□□□□ -2.37
COL4A2P08572 Y_RNA.341-201ENST00000365341 102 ntBASIC0.26□□□□□ -2.37
COL4A2P08572 SNORD14.1-201ENST00000365609 90 ntBASIC0.26□□□□□ -2.37
COL4A2P08572 Y_RNA.450-201ENST00000384198 113 ntBASIC0.26□□□□□ -2.37
COL4A2P08572 RNU6-1297P-201ENST00000384415 104 ntBASIC0.26□□□□□ -2.37
COL4A2P08572 RNU6-1215P-201ENST00000384441 102 ntBASIC0.26□□□□□ -2.37
COL4A2P08572 MT-TN-201ENST00000387400 73 ntBASIC0.26□□□□□ -2.37
COL4A2P08572 RNA5SP222-201ENST00000411039 105 ntBASIC0.26□□□□□ -2.37
COL4A2P08572 RNU6-1199P-201ENST00000411249 104 ntBASIC0.26□□□□□ -2.37
COL4A2P08572 RNU6-1304P-201ENST00000411374 106 ntBASIC0.26□□□□□ -2.37
COL4A2P08572 AC016907.1-201ENST00000419483 435 ntBASIC0.26□□□□□ -2.37
COL4A2P08572 SNORD123-201ENST00000459473 70 ntBASIC0.26□□□□□ -2.37
COL4A2P08572 RNU6-1007P-201ENST00000516586 107 ntBASIC0.26□□□□□ -2.37
COL4A2P08572 MIR4723-201ENST00000585070 81 ntBASIC0.26□□□□□ -2.37
COL4A2P08572 AC012433.1-201ENST00000588916 398 ntBASIC0.26□□□□□ -2.37
COL4A2P08572 Pinc.1-201ENST00000616452 154 ntBASIC0.26□□□□□ -2.37
COL4A2P08572 MIR409-201ENST00000362237 79 ntBASIC0.25□□□□□ -2.37
COL4A2P08572 SNORD115-30-201ENST00000364117 82 ntBASIC0.25□□□□□ -2.37
COL4A2P08572 U8.5-201ENST00000364528 136 ntBASIC0.25□□□□□ -2.37
COL4A2P08572 RNU6-442P-201ENST00000383968 104 ntBASIC0.25□□□□□ -2.37
COL4A2P08572 RNU6-20P-201ENST00000384106 107 ntBASIC0.25□□□□□ -2.37
COL4A2P08572 Y_RNA.446-201ENST00000384178 104 ntBASIC0.25□□□□□ -2.37
COL4A2P08572 SNORA72-201ENST00000384339 132 ntBASIC0.25□□□□□ -2.37
COL4A2P08572 RNY3P4-201ENST00000384428 101 ntBASIC0.25□□□□□ -2.37
COL4A2P08572 RNU6-192P-201ENST00000391253 100 ntBASIC0.25□□□□□ -2.37
COL4A2P08572 MIR548F5-201ENST00000408421 86 ntBASIC0.25□□□□□ -2.37
COL4A2P08572 Y_RNA.605-201ENST00000410577 105 ntBASIC0.25□□□□□ -2.37
COL4A2P08572 MTATP6P26-201ENST00000445926 662 ntBASIC0.25□□□□□ -2.37
COL4A2P08572 RNU7-169P-201ENST00000459456 61 ntBASIC0.25□□□□□ -2.37
COL4A2P08572 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.25□□□□□ -2.37
COL4A2P08572 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.25□□□□□ -2.37
COL4A2P08572 RN7SKP164-201ENST00000516138 266 ntBASIC0.25□□□□□ -2.37
COL4A2P08572 AC093027.1-201ENST00000546698 429 ntBASIC0.25□□□□□ -2.37
COL4A2P08572 MIR5190-201ENST00000581537 80 ntBASIC0.25□□□□□ -2.37
COL4A2P08572 AC005176.2-201ENST00000596933 147 ntBASIC0.25□□□□□ -2.37
COL4A2P08572 AC080013.6-201ENST00000606185 215 ntBASIC0.25□□□□□ -2.37
COL4A2P08572 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.25□□□□□ -2.37
COL4A2P08572 MIR3688-2-201ENST00000636963 87 ntBASIC0.25□□□□□ -2.37
COL4A2P08572 AC090625.1-201ENST00000357130 210 ntBASIC0.24□□□□□ -2.37
COL4A2P08572 RNU6-934P-201ENST00000365154 107 ntBASIC0.24□□□□□ -2.37
COL4A2P08572 SNORA36.2-201ENST00000384004 127 ntBASIC0.24□□□□□ -2.37
COL4A2P08572 Y_RNA.537-201ENST00000384626 109 ntBASIC0.24□□□□□ -2.37
COL4A2P08572 MIR15B-201ENST00000385045 98 ntBASIC0.24□□□□□ -2.37
COL4A2P08572 RNU6-1012P-201ENST00000516606 109 ntBASIC0.24□□□□□ -2.37
COL4A2P08572 RNU7-116P-201ENST00000516940 62 ntBASIC0.24□□□□□ -2.37
COL4A2P08572 MIR4251-201ENST00000635819 61 ntBASIC0.24□□□□□ -2.37
COL4A2P08572 RNU6-845P-201ENST00000362578 103 ntBASIC0.24□□□□□ -2.37
COL4A2P08572 Y_RNA.86-201ENST00000363020 111 ntBASIC0.24□□□□□ -2.37
COL4A2P08572 Y_RNA.253-201ENST00000364562 112 ntBASIC0.24□□□□□ -2.37
COL4A2P08572 RNU6-767P-201ENST00000384132 107 ntBASIC0.24□□□□□ -2.37
COL4A2P08572 U8.17-201ENST00000391292 132 ntBASIC0.24□□□□□ -2.37
COL4A2P08572 MIR1277-201ENST00000408536 78 ntBASIC0.24□□□□□ -2.37
COL4A2P08572 RNU2-61P-201ENST00000411069 191 ntBASIC0.24□□□□□ -2.37
COL4A2P08572 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.24□□□□□ -2.37
COL4A2P08572 RNU6-718P-201ENST00000516166 105 ntBASIC0.24□□□□□ -2.37
COL4A2P08572 RNU6-830P-201ENST00000516353 107 ntBASIC0.24□□□□□ -2.37
COL4A2P08572 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
COL4A2P08572 AC022441.3-201ENST00000605737 136 ntBASIC0.24□□□□□ -2.37
COL4A2P08572 JPX_2.1-201ENST00000614161 69 ntBASIC0.24□□□□□ -2.37
COL4A2P08572 MIR6516-201ENST00000630554 81 ntBASIC0.24□□□□□ -2.37
COL4A2P08572 AC073869.6-201ENST00000640656 341 ntBASIC0.24□□□□□ -2.37
COL4A2P08572 Y_RNA.318-201ENST00000365131 97 ntBASIC0.23□□□□□ -2.37
COL4A2P08572 Y_RNA.329-201ENST00000365209 107 ntBASIC0.23□□□□□ -2.37
COL4A2P08572 RNU6-613P-201ENST00000410412 108 ntBASIC0.23□□□□□ -2.37
COL4A2P08572 SNRPGP12-201ENST00000449481 213 ntBASIC0.23□□□□□ -2.37
COL4A2P08572 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.23□□□□□ -2.37
COL4A2P08572 RNU6-977P-201ENST00000516411 103 ntBASIC0.23□□□□□ -2.37
COL4A2P08572 RNU6-358P-201ENST00000516564 75 ntBASIC0.23□□□□□ -2.37
COL4A2P08572 MIR4305-201ENST00000583252 102 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 196.6 ms