Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 RNU4-76P-201ENST00000364509 141 ntBASIC0.94□□□□□ -2.26
MMP1P03956 Y_RNA.368-201ENST00000365547 113 ntBASIC0.94□□□□□ -2.26
MMP1P03956 Y_RNA.424-201ENST00000384063 103 ntBASIC0.94□□□□□ -2.26
MMP1P03956 RNU6-102P-201ENST00000384485 104 ntBASIC0.94□□□□□ -2.26
MMP1P03956 MIR653-201ENST00000385279 96 ntBASIC0.94□□□□□ -2.26
MMP1P03956 SNORD41-201ENST00000386967 70 ntBASIC0.94□□□□□ -2.26
MMP1P03956 MIR548P-201ENST00000408336 84 ntBASIC0.94□□□□□ -2.26
MMP1P03956 AL390729.2-201ENST00000416137 156 ntBASIC0.94□□□□□ -2.26
MMP1P03956 AC004941.2-201ENST00000427009 228 ntBASIC0.94□□□□□ -2.26
MMP1P03956 MTCO2P12-201ENST00000427426 682 ntBASIC0.94□□□□□ -2.26
MMP1P03956 MTCYBP6-201ENST00000441810 138 ntBASIC0.94□□□□□ -2.26
MMP1P03956 RNU6-397P-201ENST00000516226 104 ntBASIC0.94□□□□□ -2.26
MMP1P03956 AC022616.4-201ENST00000522985 181 ntBASIC0.94□□□□□ -2.26
MMP1P03956 MIR4300-201ENST00000581016 96 ntBASIC0.94□□□□□ -2.26
MMP1P03956 MIR3171-201ENST00000584270 74 ntBASIC0.94□□□□□ -2.26
MMP1P03956 HSPE1P19-201ENST00000603327 295 ntBASIC0.94□□□□□ -2.26
MMP1P03956 AC124312.5-201ENST00000604451 268 ntBASIC0.94□□□□□ -2.26
MMP1P03956 AC005972.2-201ENST00000604690 348 ntBASIC0.94□□□□□ -2.26
MMP1P03956 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.94□□□□□ -2.26
MMP1P03956 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.94□□□□□ -2.26
MMP1P03956 AL442644.1-201ENST00000454390 3105 ntBASIC0.94□□□□□ -2.26
MMP1P03956 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
MMP1P03956 Y_RNA.222-201ENST00000364264 102 ntBASIC0.93□□□□□ -2.26
MMP1P03956 MIR1252-201ENST00000408861 65 ntBASIC0.93□□□□□ -2.26
MMP1P03956 RNU6-855P-201ENST00000410395 104 ntBASIC0.93□□□□□ -2.26
MMP1P03956 RNU6-121P-201ENST00000410525 99 ntBASIC0.93□□□□□ -2.26
MMP1P03956 AC005534.2-201ENST00000431047 433 ntBASIC0.93□□□□□ -2.26
MMP1P03956 DYNLT3P2-201ENST00000442517 295 ntBASIC0.93□□□□□ -2.26
MMP1P03956 HMGN1P10-201ENST00000474557 553 ntBASIC0.93□□□□□ -2.26
MMP1P03956 Y_RNA.713-201ENST00000517013 96 ntBASIC0.93□□□□□ -2.26
MMP1P03956 RNU6-1137P-201ENST00000517073 99 ntBASIC0.93□□□□□ -2.26
MMP1P03956 RNU6-897P-201ENST00000517135 105 ntBASIC0.93□□□□□ -2.26
MMP1P03956 MIR4762-201ENST00000585261 75 ntBASIC0.93□□□□□ -2.26
MMP1P03956 RNU6-199P-201ENST00000362954 107 ntBASIC0.92□□□□□ -2.26
MMP1P03956 U8.5-201ENST00000364528 136 ntBASIC0.92□□□□□ -2.26
MMP1P03956 Y_RNA.253-201ENST00000364562 112 ntBASIC0.92□□□□□ -2.26
MMP1P03956 Y_RNA.383-201ENST00000383855 97 ntBASIC0.92□□□□□ -2.26
MMP1P03956 Y_RNA.418-201ENST00000384029 102 ntBASIC0.92□□□□□ -2.26
MMP1P03956 SNORA72-201ENST00000384339 132 ntBASIC0.92□□□□□ -2.26
MMP1P03956 MIR526A1-201ENST00000384897 85 ntBASIC0.92□□□□□ -2.26
MMP1P03956 SNORD115-46-201ENST00000390982 71 ntBASIC0.92□□□□□ -2.26
MMP1P03956 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.92□□□□□ -2.26
MMP1P03956 HSPE1P25-201ENST00000455484 251 ntBASIC0.92□□□□□ -2.26
MMP1P03956 RNU7-12P-201ENST00000516030 62 ntBASIC0.92□□□□□ -2.26
MMP1P03956 RNU6-922P-201ENST00000516753 99 ntBASIC0.92□□□□□ -2.26
MMP1P03956 SNORA70.22-201ENST00000517160 124 ntBASIC0.92□□□□□ -2.26
MMP1P03956 GHRLOS.1-201ENST00000610995 70 ntBASIC0.92□□□□□ -2.26
MMP1P03956 AL391516.1-201ENST00000554380 2449 ntBASIC0.91□□□□□ -2.26
MMP1P03956 RNU4-80P-201ENST00000363200 141 ntBASIC0.91□□□□□ -2.26
MMP1P03956 Y_RNA.183-201ENST00000363882 113 ntBASIC0.91□□□□□ -2.26
MMP1P03956 Y_RNA.341-201ENST00000365341 102 ntBASIC0.91□□□□□ -2.26
MMP1P03956 SNORA63.7-201ENST00000365579 123 ntBASIC0.91□□□□□ -2.26
MMP1P03956 RNU6-1323P-201ENST00000384025 107 ntBASIC0.91□□□□□ -2.26
MMP1P03956 Y_RNA.456-201ENST00000384232 111 ntBASIC0.91□□□□□ -2.26
MMP1P03956 MIR522-201ENST00000385071 87 ntBASIC0.91□□□□□ -2.26
MMP1P03956 RNU6-710P-201ENST00000410424 105 ntBASIC0.91□□□□□ -2.26
MMP1P03956 RNU2-14P-201ENST00000411053 191 ntBASIC0.91□□□□□ -2.26
MMP1P03956 RNU6-1054P-201ENST00000411293 104 ntBASIC0.91□□□□□ -2.26
MMP1P03956 AC104332.1-201ENST00000440471 797 ntBASIC0.91□□□□□ -2.26
MMP1P03956 SNORA31.2-201ENST00000516019 134 ntBASIC0.91□□□□□ -2.26
MMP1P03956 SNORA31.4-201ENST00000516049 129 ntBASIC0.91□□□□□ -2.26
MMP1P03956 RNU6-496P-201ENST00000516145 99 ntBASIC0.91□□□□□ -2.26
MMP1P03956 RNU6-1153P-201ENST00000516760 105 ntBASIC0.91□□□□□ -2.26
MMP1P03956 Y_RNA.701-201ENST00000516812 110 ntBASIC0.91□□□□□ -2.26
MMP1P03956 RNU6-988P-201ENST00000519081 107 ntBASIC0.91□□□□□ -2.26
MMP1P03956 AC090049.2-201ENST00000550377 109 ntBASIC0.91□□□□□ -2.26
MMP1P03956 MIR4680-201ENST00000580906 66 ntBASIC0.91□□□□□ -2.26
MMP1P03956 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.91□□□□□ -2.26
MMP1P03956 AC120024.3-201ENST00000603167 156 ntBASIC0.91□□□□□ -2.26
MMP1P03956 SNORD113-5-201ENST00000607261 78 ntBASIC0.91□□□□□ -2.26
MMP1P03956 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.91□□□□□ -2.26
MMP1P03956 Y_RNA.26-201ENST00000362539 101 ntBASIC0.9□□□□□ -2.27
MMP1P03956 SNORD68-201ENST00000363214 84 ntBASIC0.9□□□□□ -2.27
MMP1P03956 RNU6-833P-201ENST00000363486 107 ntBASIC0.9□□□□□ -2.27
MMP1P03956 SNORD113-8-201ENST00000363497 74 ntBASIC0.9□□□□□ -2.27
MMP1P03956 Y_RNA.158-201ENST00000363651 101 ntBASIC0.9□□□□□ -2.27
MMP1P03956 RNU6-1048P-201ENST00000364054 107 ntBASIC0.9□□□□□ -2.27
MMP1P03956 RNU6-801P-201ENST00000364087 105 ntBASIC0.9□□□□□ -2.27
MMP1P03956 Y_RNA.214-201ENST00000364201 112 ntBASIC0.9□□□□□ -2.27
MMP1P03956 U8.7-201ENST00000364940 136 ntBASIC0.9□□□□□ -2.27
MMP1P03956 Y_RNA.389-201ENST00000383924 113 ntBASIC0.9□□□□□ -2.27
MMP1P03956 Y_RNA.527-201ENST00000384573 102 ntBASIC0.9□□□□□ -2.27
MMP1P03956 RNU6-21P-201ENST00000384710 107 ntBASIC0.9□□□□□ -2.27
MMP1P03956 Y_RNA.621-201ENST00000411065 96 ntBASIC0.9□□□□□ -2.27
MMP1P03956 ELOCP20-201ENST00000422460 345 ntBASIC0.9□□□□□ -2.27
MMP1P03956 PIGPP3-201ENST00000425307 415 ntBASIC0.9□□□□□ -2.27
MMP1P03956 AC114811.1-201ENST00000507207 168 ntBASIC0.9□□□□□ -2.27
MMP1P03956 SEPT14P8-201ENST00000508026 178 ntBASIC0.9□□□□□ -2.27
MMP1P03956 AC024405.2-202ENST00000532731 184 ntBASIC0.9□□□□□ -2.27
MMP1P03956 AC113195.1-201ENST00000579952 141 ntBASIC0.9□□□□□ -2.27
MMP1P03956 AP003357.1-201ENST00000604497 148 ntBASIC0.9□□□□□ -2.27
MMP1P03956 MIR376A1-201ENST00000616574 68 ntBASIC0.9□□□□□ -2.27
MMP1P03956 AC012676.2-201ENST00000619258 186 ntBASIC0.9□□□□□ -2.27
MMP1P03956 MIR6513-201ENST00000621188 64 ntBASIC0.9□□□□□ -2.27
MMP1P03956 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
MMP1P03956 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.89□□□□□ -2.27
MMP1P03956 Y_RNA.153-201ENST00000363615 91 ntBASIC0.89□□□□□ -2.27
MMP1P03956 RNU6-806P-201ENST00000365147 105 ntBASIC0.89□□□□□ -2.27
MMP1P03956 MIR19B1-201ENST00000384829 87 ntBASIC0.89□□□□□ -2.27
MMP1P03956 RNU6-101P-201ENST00000410323 104 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms