Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 RNU6-1061P-201ENST00000516530 99 ntBASIC2.28□□□□□ -2.04
COL3A1P02461 MIR2681-201ENST00000581814 105 ntBASIC2.28□□□□□ -2.04
COL3A1P02461 snoZ196.1-201ENST00000625269 89 ntBASIC2.28□□□□□ -2.04
COL3A1P02461 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.28□□□□□ -2.04
COL3A1P02461 RNA5SP295-201ENST00000362655 121 ntBASIC2.27□□□□□ -2.05
COL3A1P02461 RNU4-13P-201ENST00000364019 141 ntBASIC2.27□□□□□ -2.05
COL3A1P02461 RNU6-647P-201ENST00000364243 107 ntBASIC2.27□□□□□ -2.05
COL3A1P02461 SNORD32B-201ENST00000364460 84 ntBASIC2.27□□□□□ -2.05
COL3A1P02461 SNORD14D-201ENST00000384390 87 ntBASIC2.27□□□□□ -2.05
COL3A1P02461 SNORD116-21-201ENST00000384507 92 ntBASIC2.27□□□□□ -2.05
COL3A1P02461 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
COL3A1P02461 SNORA26-201ENST00000391286 122 ntBASIC2.27□□□□□ -2.05
COL3A1P02461 AL603914.1-201ENST00000401964 204 ntBASIC2.27□□□□□ -2.05
COL3A1P02461 RNU6-221P-201ENST00000459541 99 ntBASIC2.27□□□□□ -2.05
COL3A1P02461 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.27□□□□□ -2.05
COL3A1P02461 MIR4679-1-201ENST00000637619 75 ntBASIC2.27□□□□□ -2.05
COL3A1P02461 Z82209.1-201ENST00000422141 2135 ntBASIC2.27□□□□□ -2.05
COL3A1P02461 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
COL3A1P02461 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.27□□□□□ -2.05
COL3A1P02461 AC002546.1-201ENST00000588041 2504 ntBASIC2.27□□□□□ -2.05
COL3A1P02461 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.27□□□□□ -2.05
COL3A1P02461 RNU6-978P-201ENST00000364371 103 ntBASIC2.26□□□□□ -2.05
COL3A1P02461 SNORA25.9-201ENST00000365087 128 ntBASIC2.26□□□□□ -2.05
COL3A1P02461 RNU6-1336P-201ENST00000383886 109 ntBASIC2.26□□□□□ -2.05
COL3A1P02461 RNU6-484P-201ENST00000384016 107 ntBASIC2.26□□□□□ -2.05
COL3A1P02461 RNA5SP89-201ENST00000410300 108 ntBASIC2.26□□□□□ -2.05
COL3A1P02461 RNU2-70P-201ENST00000410718 179 ntBASIC2.26□□□□□ -2.05
COL3A1P02461 MLLT10P1-201ENST00000418346 262 ntBASIC2.26□□□□□ -2.05
COL3A1P02461 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.26□□□□□ -2.05
COL3A1P02461 RNU6-168P-201ENST00000516189 101 ntBASIC2.26□□□□□ -2.05
COL3A1P02461 RNU6-948P-201ENST00000516374 107 ntBASIC2.26□□□□□ -2.05
COL3A1P02461 RPL30P11-203ENST00000598995 310 ntBASIC2.26□□□□□ -2.05
COL3A1P02461 AL049861.1-201ENST00000603130 150 ntBASIC2.26□□□□□ -2.05
COL3A1P02461 AC006435.5-201ENST00000624486 112 ntBASIC2.26□□□□□ -2.05
COL3A1P02461 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.26□□□□□ -2.05
COL3A1P02461 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
COL3A1P02461 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
COL3A1P02461 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.26□□□□□ -2.05
COL3A1P02461 MIR337-201ENST00000362281 93 ntBASIC2.26□□□□□ -2.05
COL3A1P02461 Y_RNA.280-201ENST00000364765 112 ntBASIC2.26□□□□□ -2.05
COL3A1P02461 Y_RNA.346-201ENST00000365385 112 ntBASIC2.26□□□□□ -2.05
COL3A1P02461 RNU6-975P-201ENST00000384296 105 ntBASIC2.26□□□□□ -2.05
COL3A1P02461 Y_RNA.630-201ENST00000411370 108 ntBASIC2.26□□□□□ -2.05
COL3A1P02461 snoU13.18-201ENST00000459483 104 ntBASIC2.26□□□□□ -2.05
COL3A1P02461 Y_RNA.694-201ENST00000516677 117 ntBASIC2.26□□□□□ -2.05
COL3A1P02461 RNU6-126P-201ENST00000516685 103 ntBASIC2.26□□□□□ -2.05
COL3A1P02461 AC024614.2-201ENST00000577584 372 ntBASIC2.26□□□□□ -2.05
COL3A1P02461 AL021707.8-201ENST00000609428 183 ntBASIC2.26□□□□□ -2.05
COL3A1P02461 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.26□□□□□ -2.05
COL3A1P02461 SNORA72-201ENST00000384339 132 ntBASIC2.25□□□□□ -2.05
COL3A1P02461 MIR1323-201ENST00000408090 73 ntBASIC2.25□□□□□ -2.05
COL3A1P02461 RNA5SP511-201ENST00000410487 115 ntBASIC2.25□□□□□ -2.05
COL3A1P02461 EIF4EP4-201ENST00000424916 578 ntBASIC2.25□□□□□ -2.05
COL3A1P02461 AC010531.2-201ENST00000465012 153 ntBASIC2.25□□□□□ -2.05
COL3A1P02461 AC090515.1-201ENST00000465295 476 ntBASIC2.25□□□□□ -2.05
COL3A1P02461 Y_RNA.690-201ENST00000516603 95 ntBASIC2.25□□□□□ -2.05
COL3A1P02461 RNU6-63P-201ENST00000516690 95 ntBASIC2.25□□□□□ -2.05
COL3A1P02461 AC027419.1-201ENST00000522976 328 ntBASIC2.25□□□□□ -2.05
COL3A1P02461 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.25□□□□□ -2.05
COL3A1P02461 uc_338.4-201ENST00000616635 176 ntBASIC2.25□□□□□ -2.05
COL3A1P02461 AL121890.5-201ENST00000620848 304 ntBASIC2.25□□□□□ -2.05
COL3A1P02461 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.25□□□□□ -2.05
COL3A1P02461 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.25□□□□□ -2.05
COL3A1P02461 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
COL3A1P02461 MIR7-2-201ENST00000384970 110 ntBASIC2.24□□□□□ -2.05
COL3A1P02461 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
COL3A1P02461 RNU4-62P-201ENST00000410125 130 ntBASIC2.24□□□□□ -2.05
COL3A1P02461 Y_RNA.617-201ENST00000410920 90 ntBASIC2.24□□□□□ -2.05
COL3A1P02461 RNU6-57P-201ENST00000411348 103 ntBASIC2.24□□□□□ -2.05
COL3A1P02461 Y_RNA.651-201ENST00000459380 103 ntBASIC2.24□□□□□ -2.05
COL3A1P02461 SNORD33.1-201ENST00000516213 88 ntBASIC2.24□□□□□ -2.05
COL3A1P02461 SNORA18.4-201ENST00000516440 124 ntBASIC2.24□□□□□ -2.05
COL3A1P02461 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.24□□□□□ -2.05
COL3A1P02461 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL3A1P02461 AC008555.8-201ENST00000623602 2168 ntBASIC2.23□□□□□ -2.05
COL3A1P02461 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
COL3A1P02461 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.23□□□□□ -2.05
COL3A1P02461 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL3A1P02461 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
COL3A1P02461 Y_RNA.35-201ENST00000362601 101 ntBASIC2.23□□□□□ -2.05
COL3A1P02461 RNU6-309P-201ENST00000364573 106 ntBASIC2.23□□□□□ -2.05
COL3A1P02461 Y_RNA.634-201ENST00000364811 113 ntBASIC2.23□□□□□ -2.05
COL3A1P02461 SNORD58C-201ENST00000365223 64 ntBASIC2.23□□□□□ -2.05
COL3A1P02461 U6atac.2-201ENST00000408644 118 ntBASIC2.23□□□□□ -2.05
COL3A1P02461 RN7SKP19-201ENST00000516016 252 ntBASIC2.23□□□□□ -2.05
COL3A1P02461 AC015720.1-201ENST00000565251 277 ntBASIC2.23□□□□□ -2.05
COL3A1P02461 MIR4303-201ENST00000581299 66 ntBASIC2.23□□□□□ -2.05
COL3A1P02461 AC090517.3-201ENST00000625170 141 ntBASIC2.23□□□□□ -2.05
COL3A1P02461 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.23□□□□□ -2.05
COL3A1P02461 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.22□□□□□ -2.05
COL3A1P02461 RNU1-105P-201ENST00000363470 161 ntBASIC2.22□□□□□ -2.05
COL3A1P02461 SNORD31B-201ENST00000364977 69 ntBASIC2.22□□□□□ -2.05
COL3A1P02461 RNU6-1240P-201ENST00000365155 104 ntBASIC2.22□□□□□ -2.05
COL3A1P02461 RNU6-234P-201ENST00000365229 104 ntBASIC2.22□□□□□ -2.05
COL3A1P02461 RNA5SP38-201ENST00000410750 119 ntBASIC2.22□□□□□ -2.05
COL3A1P02461 AC008134.1-201ENST00000420943 193 ntBASIC2.22□□□□□ -2.05
COL3A1P02461 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.22□□□□□ -2.05
COL3A1P02461 AC080013.2-201ENST00000460866 323 ntBASIC2.22□□□□□ -2.05
COL3A1P02461 RPS26P45-201ENST00000471748 340 ntBASIC2.22□□□□□ -2.05
COL3A1P02461 MIR449C-201ENST00000516047 92 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms