Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 SNORA20.3-201ENST00000516880 132 ntBASIC0.6□□□□□ -2.31
MBD3O95983 MIR5000-201ENST00000577717 103 ntBASIC0.6□□□□□ -2.31
MBD3O95983 MIR2681-201ENST00000581814 105 ntBASIC0.6□□□□□ -2.31
MBD3O95983 MIR5188-201ENST00000583467 113 ntBASIC0.6□□□□□ -2.31
MBD3O95983 AL355073.2-201ENST00000612106 557 ntBASIC0.6□□□□□ -2.31
MBD3O95983 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
MBD3O95983 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.6□□□□□ -2.31
MBD3O95983 MIR4251-201ENST00000635819 61 ntBASIC0.6□□□□□ -2.31
MBD3O95983 RNY3P11-201ENST00000364153 102 ntBASIC0.59□□□□□ -2.31
MBD3O95983 RNY1-201ENST00000364228 113 ntBASIC0.59□□□□□ -2.31
MBD3O95983 RNU6-1335P-201ENST00000365426 107 ntBASIC0.59□□□□□ -2.31
MBD3O95983 RNU6-442P-201ENST00000383968 104 ntBASIC0.59□□□□□ -2.31
MBD3O95983 AC138393.2-201ENST00000414742 246 ntBASIC0.59□□□□□ -2.31
MBD3O95983 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.59□□□□□ -2.31
MBD3O95983 SNRPGP14-201ENST00000435400 219 ntBASIC0.59□□□□□ -2.31
MBD3O95983 RNU7-115P-201ENST00000516433 55 ntBASIC0.59□□□□□ -2.31
MBD3O95983 RNU6-699P-201ENST00000517081 110 ntBASIC0.59□□□□□ -2.31
MBD3O95983 CYP3A137P-201ENST00000562436 69 ntBASIC0.59□□□□□ -2.31
MBD3O95983 AC133485.1-201ENST00000567176 124 ntBASIC0.59□□□□□ -2.31
MBD3O95983 AC138907.6-201ENST00000568401 126 ntBASIC0.59□□□□□ -2.31
MBD3O95983 AL355375.2-201ENST00000574825 175 ntBASIC0.59□□□□□ -2.31
MBD3O95983 MIR548AR-201ENST00000582191 57 ntBASIC0.59□□□□□ -2.31
MBD3O95983 Y_RNA.772-201ENST00000606692 102 ntBASIC0.59□□□□□ -2.31
MBD3O95983 AL138825.1-201ENST00000618587 192 ntBASIC0.59□□□□□ -2.31
MBD3O95983 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
MBD3O95983 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
MBD3O95983 SNORD63-201ENST00000384262 68 ntBASIC0.58□□□□□ -2.32
MBD3O95983 MIR598-201ENST00000384868 97 ntBASIC0.58□□□□□ -2.32
MBD3O95983 SNORD99-201ENST00000408612 74 ntBASIC0.58□□□□□ -2.32
MBD3O95983 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.58□□□□□ -2.32
MBD3O95983 HMGN1P10-201ENST00000474557 553 ntBASIC0.58□□□□□ -2.32
MBD3O95983 RNU6-1007P-201ENST00000516586 107 ntBASIC0.58□□□□□ -2.32
MBD3O95983 MIR2115-201ENST00000516657 100 ntBASIC0.58□□□□□ -2.32
MBD3O95983 AC018659.1-201ENST00000551083 169 ntBASIC0.58□□□□□ -2.32
MBD3O95983 AC127455.1-201ENST00000565496 145 ntBASIC0.58□□□□□ -2.32
MBD3O95983 AC104695.3-201ENST00000604052 296 ntBASIC0.58□□□□□ -2.32
MBD3O95983 JPX_2.1-201ENST00000614161 69 ntBASIC0.58□□□□□ -2.32
MBD3O95983 Pinc.1-201ENST00000616452 154 ntBASIC0.58□□□□□ -2.32
MBD3O95983 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.58□□□□□ -2.32
MBD3O95983 MIR6516-201ENST00000630554 81 ntBASIC0.58□□□□□ -2.32
MBD3O95983 MIR4272-201ENST00000635924 64 ntBASIC0.58□□□□□ -2.32
MBD3O95983 RNU6-674P-201ENST00000363831 107 ntBASIC0.57□□□□□ -2.32
MBD3O95983 Y_RNA.428-201ENST00000384078 102 ntBASIC0.57□□□□□ -2.32
MBD3O95983 RNU6-708P-201ENST00000384217 107 ntBASIC0.57□□□□□ -2.32
MBD3O95983 RNY4P36-201ENST00000391116 96 ntBASIC0.57□□□□□ -2.32
MBD3O95983 MIR1827-201ENST00000408549 66 ntBASIC0.57□□□□□ -2.32
MBD3O95983 RNU6-1304P-201ENST00000411374 106 ntBASIC0.57□□□□□ -2.32
MBD3O95983 AF228730.4-201ENST00000421457 183 ntBASIC0.57□□□□□ -2.32
MBD3O95983 RNU7-152P-201ENST00000458982 64 ntBASIC0.57□□□□□ -2.32
MBD3O95983 Y_RNA.713-201ENST00000517013 96 ntBASIC0.57□□□□□ -2.32
MBD3O95983 AC024405.2-202ENST00000532731 184 ntBASIC0.57□□□□□ -2.32
MBD3O95983 AC006600.1-201ENST00000572529 153 ntBASIC0.57□□□□□ -2.32
MBD3O95983 AC005730.3-201ENST00000583067 366 ntBASIC0.57□□□□□ -2.32
MBD3O95983 AL121655.1-201ENST00000605811 308 ntBASIC0.57□□□□□ -2.32
MBD3O95983 Y_RNA.168-201ENST00000363740 102 ntBASIC0.56□□□□□ -2.32
MBD3O95983 SNORD18A-201ENST00000363753 72 ntBASIC0.56□□□□□ -2.32
MBD3O95983 Y_RNA.259-201ENST00000364619 101 ntBASIC0.56□□□□□ -2.32
MBD3O95983 Y_RNA.384-201ENST00000383909 102 ntBASIC0.56□□□□□ -2.32
MBD3O95983 Y_RNA.537-201ENST00000384626 109 ntBASIC0.56□□□□□ -2.32
MBD3O95983 MIR489-201ENST00000384923 84 ntBASIC0.56□□□□□ -2.32
MBD3O95983 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.56□□□□□ -2.32
MBD3O95983 Y_RNA.619-201ENST00000410951 90 ntBASIC0.56□□□□□ -2.32
MBD3O95983 RNU6-277P-201ENST00000516272 106 ntBASIC0.56□□□□□ -2.32
MBD3O95983 RNU4-54P-201ENST00000516428 129 ntBASIC0.56□□□□□ -2.32
MBD3O95983 Y_RNA.718-201ENST00000517110 102 ntBASIC0.56□□□□□ -2.32
MBD3O95983 SNORD116.3-201ENST00000517176 78 ntBASIC0.56□□□□□ -2.32
MBD3O95983 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.56□□□□□ -2.32
MBD3O95983 7SK.10-201ENST00000621414 298 ntBASIC0.56□□□□□ -2.32
MBD3O95983 AC099654.14-201ENST00000638599 341 ntBASIC0.56□□□□□ -2.32
MBD3O95983 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
MBD3O95983 SNORD81.1-201ENST00000363064 77 ntBASIC0.55□□□□□ -2.32
MBD3O95983 RNU6-1209P-201ENST00000363655 107 ntBASIC0.55□□□□□ -2.32
MBD3O95983 Y_RNA.187-201ENST00000363918 113 ntBASIC0.55□□□□□ -2.32
MBD3O95983 Y_RNA.331-201ENST00000365267 102 ntBASIC0.55□□□□□ -2.32
MBD3O95983 Y_RNA.463-201ENST00000384271 102 ntBASIC0.55□□□□□ -2.32
MBD3O95983 Y_RNA.466-201ENST00000384294 113 ntBASIC0.55□□□□□ -2.32
MBD3O95983 SNORD116-29-201ENST00000384516 83 ntBASIC0.55□□□□□ -2.32
MBD3O95983 MT-TN-201ENST00000387400 73 ntBASIC0.55□□□□□ -2.32
MBD3O95983 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.55□□□□□ -2.32
MBD3O95983 SNORA40.14-201ENST00000516543 86 ntBASIC0.55□□□□□ -2.32
MBD3O95983 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.55□□□□□ -2.32
MBD3O95983 AC093027.1-201ENST00000546698 429 ntBASIC0.55□□□□□ -2.32
MBD3O95983 AC008507.4-201ENST00000585464 127 ntBASIC0.55□□□□□ -2.32
MBD3O95983 AC022709.1-201ENST00000615967 87 ntBASIC0.55□□□□□ -2.32
MBD3O95983 MIR548AY-201ENST00000617669 107 ntBASIC0.55□□□□□ -2.32
MBD3O95983 Y_RNA.142-201ENST00000363491 102 ntBASIC0.54□□□□□ -2.32
MBD3O95983 Y_RNA.148-201ENST00000363557 117 ntBASIC0.54□□□□□ -2.32
MBD3O95983 RNU6-268P-201ENST00000364174 107 ntBASIC0.54□□□□□ -2.32
MBD3O95983 U8.7-201ENST00000364940 136 ntBASIC0.54□□□□□ -2.32
MBD3O95983 RNU6-580P-201ENST00000365159 107 ntBASIC0.54□□□□□ -2.32
MBD3O95983 SNORA1.2-201ENST00000365189 134 ntBASIC0.54□□□□□ -2.32
MBD3O95983 RNU1-115P-201ENST00000365329 160 ntBASIC0.54□□□□□ -2.32
MBD3O95983 RNU6-396P-201ENST00000365369 105 ntBASIC0.54□□□□□ -2.32
MBD3O95983 Y_RNA.458-201ENST00000384240 102 ntBASIC0.54□□□□□ -2.32
MBD3O95983 SNORD28B-201ENST00000390993 75 ntBASIC0.54□□□□□ -2.32
MBD3O95983 RNU6-1248P-201ENST00000391096 64 ntBASIC0.54□□□□□ -2.32
MBD3O95983 RNU1-119P-201ENST00000391122 165 ntBASIC0.54□□□□□ -2.32
MBD3O95983 RNU6-994P-201ENST00000410507 111 ntBASIC0.54□□□□□ -2.32
MBD3O95983 RPL23AP54-201ENST00000495129 419 ntBASIC0.54□□□□□ -2.32
MBD3O95983 RNA5SP121-201ENST00000516537 101 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 253.2 ms