Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 RPL39P39-201ENST00000455840 151 ntBASIC1.39□□□□□ -2.19
RTN3O95197 RNU6-191P-201ENST00000516295 94 ntBASIC1.39□□□□□ -2.19
RTN3O95197 SNORD45.4-201ENST00000516629 73 ntBASIC1.39□□□□□ -2.19
RTN3O95197 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.39□□□□□ -2.19
RTN3O95197 AC044792.1-201ENST00000593294 196 ntBASIC1.39□□□□□ -2.19
RTN3O95197 JPX_2.1-201ENST00000614161 69 ntBASIC1.39□□□□□ -2.19
RTN3O95197 AC007742.2-201ENST00000618226 398 ntBASIC1.39□□□□□ -2.19
RTN3O95197 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.39□□□□□ -2.19
RTN3O95197 Y_RNA.336-201ENST00000365307 109 ntBASIC1.38□□□□□ -2.19
RTN3O95197 MIR613-201ENST00000385248 95 ntBASIC1.38□□□□□ -2.19
RTN3O95197 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
RTN3O95197 MIR1298-201ENST00000408783 112 ntBASIC1.38□□□□□ -2.19
RTN3O95197 MTND4LP30-201ENST00000454092 297 ntBASIC1.38□□□□□ -2.19
RTN3O95197 LINC01399-202ENST00000458450 244 ntBASIC1.38□□□□□ -2.19
RTN3O95197 RNU7-141P-201ENST00000459304 62 ntBASIC1.38□□□□□ -2.19
RTN3O95197 RNU6-1143P-201ENST00000516125 104 ntBASIC1.38□□□□□ -2.19
RTN3O95197 RNA5SP220-201ENST00000516298 104 ntBASIC1.38□□□□□ -2.19
RTN3O95197 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.38□□□□□ -2.19
RTN3O95197 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
RTN3O95197 Y_RNA.105-201ENST00000363182 111 ntBASIC1.37□□□□□ -2.19
RTN3O95197 RNU6-770P-201ENST00000363929 105 ntBASIC1.37□□□□□ -2.19
RTN3O95197 RNU6-801P-201ENST00000364087 105 ntBASIC1.37□□□□□ -2.19
RTN3O95197 RNY1-201ENST00000364228 113 ntBASIC1.37□□□□□ -2.19
RTN3O95197 SNORA25.8-201ENST00000364831 128 ntBASIC1.37□□□□□ -2.19
RTN3O95197 MIR758-201ENST00000390227 88 ntBASIC1.37□□□□□ -2.19
RTN3O95197 RNU6-121P-201ENST00000410525 99 ntBASIC1.37□□□□□ -2.19
RTN3O95197 ELOCP20-201ENST00000422460 345 ntBASIC1.37□□□□□ -2.19
RTN3O95197 MTCYBP6-201ENST00000441810 138 ntBASIC1.37□□□□□ -2.19
RTN3O95197 RNU6-947P-201ENST00000516264 106 ntBASIC1.37□□□□□ -2.19
RTN3O95197 MIR2681-201ENST00000581814 105 ntBASIC1.37□□□□□ -2.19
RTN3O95197 MIR3660-201ENST00000584845 100 ntBASIC1.37□□□□□ -2.19
RTN3O95197 AC087685.1-201ENST00000587507 141 ntBASIC1.37□□□□□ -2.19
RTN3O95197 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.37□□□□□ -2.19
RTN3O95197 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.37□□□□□ -2.19
RTN3O95197 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
RTN3O95197 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
RTN3O95197 Y_RNA.210-201ENST00000364161 110 ntBASIC1.36□□□□□ -2.19
RTN3O95197 Y_RNA.214-201ENST00000364201 112 ntBASIC1.36□□□□□ -2.19
RTN3O95197 RNU6-290P-201ENST00000365212 101 ntBASIC1.36□□□□□ -2.19
RTN3O95197 SNORD114-22-201ENST00000365423 72 ntBASIC1.36□□□□□ -2.19
RTN3O95197 RNU6-969P-201ENST00000383900 105 ntBASIC1.36□□□□□ -2.19
RTN3O95197 MIR15B-201ENST00000385045 98 ntBASIC1.36□□□□□ -2.19
RTN3O95197 SNORA40.6-201ENST00000391153 128 ntBASIC1.36□□□□□ -2.19
RTN3O95197 SNORA36B-201ENST00000410438 131 ntBASIC1.36□□□□□ -2.19
RTN3O95197 RNU2-14P-201ENST00000411053 191 ntBASIC1.36□□□□□ -2.19
RTN3O95197 RNU6-1054P-201ENST00000411293 104 ntBASIC1.36□□□□□ -2.19
RTN3O95197 RNU6-437P-201ENST00000459408 95 ntBASIC1.36□□□□□ -2.19
RTN3O95197 AC004223.1-201ENST00000479840 271 ntBASIC1.36□□□□□ -2.19
RTN3O95197 SNORA31.4-201ENST00000516049 129 ntBASIC1.36□□□□□ -2.19
RTN3O95197 RNY3P15-201ENST00000516297 97 ntBASIC1.36□□□□□ -2.19
RTN3O95197 Y_RNA.19-201ENST00000362462 99 ntBASIC1.35□□□□□ -2.19
RTN3O95197 RNU6-1048P-201ENST00000364054 107 ntBASIC1.35□□□□□ -2.19
RTN3O95197 SNORD50B-201ENST00000364995 70 ntBASIC1.35□□□□□ -2.19
RTN3O95197 SNORA33.2-201ENST00000365413 134 ntBASIC1.35□□□□□ -2.19
RTN3O95197 MIR136-201ENST00000385207 82 ntBASIC1.35□□□□□ -2.19
RTN3O95197 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.35□□□□□ -2.19
RTN3O95197 AC005534.2-201ENST00000431047 433 ntBASIC1.35□□□□□ -2.19
RTN3O95197 MTCO1P5-201ENST00000433573 344 ntBASIC1.35□□□□□ -2.19
RTN3O95197 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.35□□□□□ -2.19
RTN3O95197 SNORA31.2-201ENST00000516019 134 ntBASIC1.35□□□□□ -2.19
RTN3O95197 RNU6-764P-201ENST00000516396 105 ntBASIC1.35□□□□□ -2.19
RTN3O95197 SNORD111.1-201ENST00000516421 86 ntBASIC1.35□□□□□ -2.19
RTN3O95197 AC037487.3-201ENST00000606668 112 ntBASIC1.35□□□□□ -2.19
RTN3O95197 MIR6078-201ENST00000611069 100 ntBASIC1.35□□□□□ -2.19
RTN3O95197 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
RTN3O95197 AC091895.1-201ENST00000624494 256 ntBASIC1.35□□□□□ -2.19
RTN3O95197 RNU6-674P-201ENST00000363831 107 ntBASIC1.34□□□□□ -2.19
RTN3O95197 RNU6-899P-201ENST00000363947 107 ntBASIC1.34□□□□□ -2.19
RTN3O95197 RNU6-1227P-201ENST00000383981 107 ntBASIC1.34□□□□□ -2.19
RTN3O95197 RNU6-639P-201ENST00000384074 107 ntBASIC1.34□□□□□ -2.19
RTN3O95197 SNORA25-201ENST00000384384 134 ntBASIC1.34□□□□□ -2.19
RTN3O95197 RNU6-939P-201ENST00000384634 107 ntBASIC1.34□□□□□ -2.19
RTN3O95197 MIR516B2-201ENST00000385190 85 ntBASIC1.34□□□□□ -2.19
RTN3O95197 SNORA53-201ENST00000391141 249 ntBASIC1.34□□□□□ -2.19
RTN3O95197 SNORA26.5-201ENST00000391215 123 ntBASIC1.34□□□□□ -2.19
RTN3O95197 RPS29P29-201ENST00000456396 171 ntBASIC1.34□□□□□ -2.19
RTN3O95197 AC005357.1-201ENST00000588399 301 ntBASIC1.34□□□□□ -2.19
RTN3O95197 AL022345.2-201ENST00000606307 135 ntBASIC1.34□□□□□ -2.19
RTN3O95197 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
RTN3O95197 RNU6-1209P-201ENST00000363655 107 ntBASIC1.33□□□□□ -2.2
RTN3O95197 SNORD14E-201ENST00000364009 85 ntBASIC1.33□□□□□ -2.2
RTN3O95197 AC245047.7-201ENST00000440265 293 ntBASIC1.33□□□□□ -2.2
RTN3O95197 AC048334.1-201ENST00000477975 159 ntBASIC1.33□□□□□ -2.2
RTN3O95197 RNU2-31P-201ENST00000516954 155 ntBASIC1.33□□□□□ -2.2
RTN3O95197 SNORA70.22-201ENST00000517160 124 ntBASIC1.33□□□□□ -2.2
RTN3O95197 AC090142.3-201ENST00000519012 385 ntBASIC1.33□□□□□ -2.2
RTN3O95197 AL512605.2-201ENST00000592972 256 ntBASIC1.33□□□□□ -2.2
RTN3O95197 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.33□□□□□ -2.2
RTN3O95197 SNORA25.1-201ENST00000362326 128 ntBASIC1.32□□□□□ -2.2
RTN3O95197 snoU2_19.2-201ENST00000363024 80 ntBASIC1.32□□□□□ -2.2
RTN3O95197 Y_RNA.153-201ENST00000363615 91 ntBASIC1.32□□□□□ -2.2
RTN3O95197 RNU6-53P-201ENST00000365367 106 ntBASIC1.32□□□□□ -2.2
RTN3O95197 RNU6-326P-201ENST00000365480 107 ntBASIC1.32□□□□□ -2.2
RTN3O95197 RNU6-514P-201ENST00000384208 107 ntBASIC1.32□□□□□ -2.2
RTN3O95197 MIR618-201ENST00000385287 98 ntBASIC1.32□□□□□ -2.2
RTN3O95197 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
RTN3O95197 MTCO2P33-201ENST00000402100 465 ntBASIC1.32□□□□□ -2.2
RTN3O95197 RNU6-985P-201ENST00000410182 104 ntBASIC1.32□□□□□ -2.2
RTN3O95197 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.32□□□□□ -2.2
RTN3O95197 AL133373.1-201ENST00000497098 94 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 219.9 ms