Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 MIR526A1-201ENST00000384897 85 ntBASIC1.07□□□□□ -2.24
CSDE1O75534 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
CSDE1O75534 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.07□□□□□ -2.24
CSDE1O75534 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.07□□□□□ -2.24
CSDE1O75534 HMGN1P10-201ENST00000474557 553 ntBASIC1.07□□□□□ -2.24
CSDE1O75534 SNORA31.2-201ENST00000516019 134 ntBASIC1.07□□□□□ -2.24
CSDE1O75534 SNORA40.15-201ENST00000516884 107 ntBASIC1.07□□□□□ -2.24
CSDE1O75534 AC024405.2-202ENST00000532731 184 ntBASIC1.07□□□□□ -2.24
CSDE1O75534 MIR4300-201ENST00000581016 96 ntBASIC1.07□□□□□ -2.24
CSDE1O75534 AC104695.3-201ENST00000604052 296 ntBASIC1.07□□□□□ -2.24
CSDE1O75534 RAC1P9-201ENST00000604990 392 ntBASIC1.07□□□□□ -2.24
CSDE1O75534 AL022345.2-201ENST00000606307 135 ntBASIC1.07□□□□□ -2.24
CSDE1O75534 JPX_2.1-201ENST00000614161 69 ntBASIC1.07□□□□□ -2.24
CSDE1O75534 MIR548AY-201ENST00000617669 107 ntBASIC1.07□□□□□ -2.24
CSDE1O75534 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CSDE1O75534 Y_RNA.183-201ENST00000363882 113 ntBASIC1.06□□□□□ -2.24
CSDE1O75534 snoU2-30.1-201ENST00000365012 70 ntBASIC1.06□□□□□ -2.24
CSDE1O75534 SNORA22B-201ENST00000383876 138 ntBASIC1.06□□□□□ -2.24
CSDE1O75534 MIR522-201ENST00000385071 87 ntBASIC1.06□□□□□ -2.24
CSDE1O75534 MIR516B2-201ENST00000385190 85 ntBASIC1.06□□□□□ -2.24
CSDE1O75534 RNU6-1248P-201ENST00000391096 64 ntBASIC1.06□□□□□ -2.24
CSDE1O75534 MIR548J-201ENST00000408833 112 ntBASIC1.06□□□□□ -2.24
CSDE1O75534 LINC01399-202ENST00000458450 244 ntBASIC1.06□□□□□ -2.24
CSDE1O75534 SNORD111.1-201ENST00000516421 86 ntBASIC1.06□□□□□ -2.24
CSDE1O75534 SNORD45.4-201ENST00000516629 73 ntBASIC1.06□□□□□ -2.24
CSDE1O75534 SNORA70.22-201ENST00000517160 124 ntBASIC1.06□□□□□ -2.24
CSDE1O75534 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.06□□□□□ -2.24
CSDE1O75534 MIR4698-201ENST00000577795 80 ntBASIC1.06□□□□□ -2.24
CSDE1O75534 MIR4762-201ENST00000585261 75 ntBASIC1.06□□□□□ -2.24
CSDE1O75534 Y_RNA.216-201ENST00000364205 93 ntBASIC1.05□□□□□ -2.24
CSDE1O75534 MIR802-201ENST00000390235 94 ntBASIC1.05□□□□□ -2.24
CSDE1O75534 MIR1298-201ENST00000408783 112 ntBASIC1.05□□□□□ -2.24
CSDE1O75534 MIR1252-201ENST00000408861 65 ntBASIC1.05□□□□□ -2.24
CSDE1O75534 OR2A41P-201ENST00000473586 105 ntBASIC1.05□□□□□ -2.24
CSDE1O75534 SNORA31.4-201ENST00000516049 129 ntBASIC1.05□□□□□ -2.24
CSDE1O75534 RNU7-115P-201ENST00000516433 55 ntBASIC1.05□□□□□ -2.24
CSDE1O75534 RNU6-897P-201ENST00000517135 105 ntBASIC1.05□□□□□ -2.24
CSDE1O75534 AC127455.1-201ENST00000565496 145 ntBASIC1.05□□□□□ -2.24
CSDE1O75534 HSPE1P19-201ENST00000603327 295 ntBASIC1.05□□□□□ -2.24
CSDE1O75534 AP003357.1-201ENST00000604497 148 ntBASIC1.05□□□□□ -2.24
CSDE1O75534 MIR6734-201ENST00000621166 68 ntBASIC1.05□□□□□ -2.24
CSDE1O75534 AC027335.2-201ENST00000624030 375 ntBASIC1.05□□□□□ -2.24
CSDE1O75534 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.05□□□□□ -2.24
CSDE1O75534 RNU6-1048P-201ENST00000364054 107 ntBASIC1.04□□□□□ -2.24
CSDE1O75534 Y_RNA.203-201ENST00000364106 102 ntBASIC1.04□□□□□ -2.24
CSDE1O75534 Y_RNA.796-201ENST00000364268 102 ntBASIC1.04□□□□□ -2.24
CSDE1O75534 U8.7-201ENST00000364940 136 ntBASIC1.04□□□□□ -2.24
CSDE1O75534 Y_RNA.799-201ENST00000364992 102 ntBASIC1.04□□□□□ -2.24
CSDE1O75534 RNU6-102P-201ENST00000384485 104 ntBASIC1.04□□□□□ -2.24
CSDE1O75534 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
CSDE1O75534 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.04□□□□□ -2.24
CSDE1O75534 HMGN2P32-201ENST00000444648 269 ntBASIC1.04□□□□□ -2.24
CSDE1O75534 AC048334.1-201ENST00000477975 159 ntBASIC1.04□□□□□ -2.24
CSDE1O75534 Y_RNA.711-201ENST00000516993 102 ntBASIC1.04□□□□□ -2.24
CSDE1O75534 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.03□□□□□ -2.24
CSDE1O75534 RNU4-90P-201ENST00000362773 141 ntBASIC1.03□□□□□ -2.24
CSDE1O75534 Y_RNA.336-201ENST00000365307 109 ntBASIC1.03□□□□□ -2.24
CSDE1O75534 AC117470.1-201ENST00000381974 330 ntBASIC1.03□□□□□ -2.24
CSDE1O75534 RNU6-910P-201ENST00000390844 107 ntBASIC1.03□□□□□ -2.24
CSDE1O75534 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.03□□□□□ -2.24
CSDE1O75534 SNORD116-28-201ENST00000516123 91 ntBASIC1.03□□□□□ -2.24
CSDE1O75534 RNA5SP220-201ENST00000516298 104 ntBASIC1.03□□□□□ -2.24
CSDE1O75534 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.03□□□□□ -2.24
CSDE1O75534 MIR3171-201ENST00000584270 74 ntBASIC1.03□□□□□ -2.24
CSDE1O75534 Y_RNA.105-201ENST00000363182 111 ntBASIC1.02□□□□□ -2.25
CSDE1O75534 RNU1-124P-201ENST00000363861 145 ntBASIC1.02□□□□□ -2.25
CSDE1O75534 SNORD14E-201ENST00000364009 85 ntBASIC1.02□□□□□ -2.25
CSDE1O75534 SNORD50B-201ENST00000364995 70 ntBASIC1.02□□□□□ -2.25
CSDE1O75534 Y_RNA.380-201ENST00000365663 111 ntBASIC1.02□□□□□ -2.25
CSDE1O75534 RNU6-42P-201ENST00000384165 107 ntBASIC1.02□□□□□ -2.25
CSDE1O75534 Y_RNA.455-201ENST00000384230 98 ntBASIC1.02□□□□□ -2.25
CSDE1O75534 Y_RNA.527-201ENST00000384573 102 ntBASIC1.02□□□□□ -2.25
CSDE1O75534 Y_RNA.569-201ENST00000384749 103 ntBASIC1.02□□□□□ -2.25
CSDE1O75534 MIR136-201ENST00000385207 82 ntBASIC1.02□□□□□ -2.25
CSDE1O75534 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
CSDE1O75534 RNU7-141P-201ENST00000459304 62 ntBASIC1.02□□□□□ -2.25
CSDE1O75534 RNY3P15-201ENST00000516297 97 ntBASIC1.02□□□□□ -2.25
CSDE1O75534 AC131281.1-201ENST00000522984 164 ntBASIC1.02□□□□□ -2.25
CSDE1O75534 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CSDE1O75534 MIR6788-201ENST00000618842 66 ntBASIC1.02□□□□□ -2.25
CSDE1O75534 AC012676.2-201ENST00000619258 186 ntBASIC1.02□□□□□ -2.25
CSDE1O75534 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.02□□□□□ -2.25
CSDE1O75534 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
CSDE1O75534 Y_RNA.158-201ENST00000363651 101 ntBASIC1.01□□□□□ -2.25
CSDE1O75534 Y_RNA.418-201ENST00000384029 102 ntBASIC1.01□□□□□ -2.25
CSDE1O75534 SNORA72.4-201ENST00000384174 132 ntBASIC1.01□□□□□ -2.25
CSDE1O75534 MIR15B-201ENST00000385045 98 ntBASIC1.01□□□□□ -2.25
CSDE1O75534 SNORD115-46-201ENST00000390982 71 ntBASIC1.01□□□□□ -2.25
CSDE1O75534 MTCO2P33-201ENST00000402100 465 ntBASIC1.01□□□□□ -2.25
CSDE1O75534 SNORA36B-201ENST00000410438 131 ntBASIC1.01□□□□□ -2.25
CSDE1O75534 AC245047.7-201ENST00000440265 293 ntBASIC1.01□□□□□ -2.25
CSDE1O75534 HSPE1P25-201ENST00000455484 251 ntBASIC1.01□□□□□ -2.25
CSDE1O75534 RNU6-437P-201ENST00000459408 95 ntBASIC1.01□□□□□ -2.25
CSDE1O75534 snoU13.18-201ENST00000459483 104 ntBASIC1.01□□□□□ -2.25
CSDE1O75534 RNU6-496P-201ENST00000516145 99 ntBASIC1.01□□□□□ -2.25
CSDE1O75534 RNU6-191P-201ENST00000516295 94 ntBASIC1.01□□□□□ -2.25
CSDE1O75534 AC136628.3-201ENST00000521868 290 ntBASIC1.01□□□□□ -2.25
CSDE1O75534 AC037487.3-201ENST00000606668 112 ntBASIC1.01□□□□□ -2.25
CSDE1O75534 AC007742.2-201ENST00000618226 398 ntBASIC1.01□□□□□ -2.25
CSDE1O75534 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 186.4 ms