Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RNU6-1076P-201ENST00000410397 104 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 RNU6-355P-201ENST00000410427 104 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 RNU6-791P-201ENST00000410467 104 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 RNU6-705P-201ENST00000410601 104 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 RNU6-1100P-201ENST00000410691 104 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 RNU6-860P-201ENST00000410860 104 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 RNA5SP104-201ENST00000410989 118 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 RNU6-1217P-201ENST00000411276 104 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 RNU6-785P-201ENST00000411324 104 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 AC015818.7-201ENST00000428754 109 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 SNORA71B-202ENST00000439232 272 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 AC069285.2-201ENST00000440210 275 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.51□□□□□ -1.85
GFRA3O60609 HMGN2P21-201ENST00000447764 270 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 Y_RNA.648-201ENST00000459455 110 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 S100A11P1-201ENST00000477525 312 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 RNA5SP356-201ENST00000515972 94 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 SNORA31.1-201ENST00000515993 133 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 SNORA31.5-201ENST00000516190 133 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 RNU7-137P-201ENST00000516788 62 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 RNU6-958P-201ENST00000516995 106 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 MIR4791-201ENST00000607666 84 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 U6.90-201ENST00000614007 104 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 U6.70-201ENST00000620287 104 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
GFRA3O60609 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
GFRA3O60609 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.5□□□□□ -1.85
GFRA3O60609 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.5□□□□□ -1.85
GFRA3O60609 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.5□□□□□ -1.85
GFRA3O60609 SNORD114-10-201ENST00000363409 72 ntBASIC3.5□□□□□ -1.85
GFRA3O60609 RNU6-895P-201ENST00000384125 103 ntBASIC3.5□□□□□ -1.85
GFRA3O60609 RNU6-154P-201ENST00000384306 106 ntBASIC3.5□□□□□ -1.85
GFRA3O60609 SNORD45A-201ENST00000384512 84 ntBASIC3.5□□□□□ -1.85
GFRA3O60609 MIR513A2-201ENST00000385249 127 ntBASIC3.5□□□□□ -1.85
GFRA3O60609 RNA5SP424-201ENST00000390988 115 ntBASIC3.5□□□□□ -1.85
GFRA3O60609 SNORD90-201ENST00000391145 111 ntBASIC3.5□□□□□ -1.85
GFRA3O60609 MIR887-201ENST00000401258 79 ntBASIC3.5□□□□□ -1.85
GFRA3O60609 RNU2-7P-201ENST00000410794 178 ntBASIC3.5□□□□□ -1.85
GFRA3O60609 RNU4-83P-201ENST00000410863 133 ntBASIC3.5□□□□□ -1.85
GFRA3O60609 RNA5SP247-201ENST00000411181 105 ntBASIC3.5□□□□□ -1.85
GFRA3O60609 AC005908.1-201ENST00000468701 347 ntBASIC3.5□□□□□ -1.85
GFRA3O60609 VWA8P1-201ENST00000510889 176 ntBASIC3.5□□□□□ -1.85
GFRA3O60609 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.5□□□□□ -1.85
GFRA3O60609 RNU1-142P-201ENST00000516682 145 ntBASIC3.5□□□□□ -1.85
GFRA3O60609 MIR3609-201ENST00000582661 80 ntBASIC3.5□□□□□ -1.85
GFRA3O60609 AL020996.3-201ENST00000606617 222 ntBASIC3.5□□□□□ -1.85
GFRA3O60609 CTSLP2-204ENST00000629029 392 ntBASIC3.5□□□□□ -1.85
GFRA3O60609 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.5□□□□□ -1.85
GFRA3O60609 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
GFRA3O60609 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
GFRA3O60609 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
GFRA3O60609 Z83843.1-201ENST00000604070 3685 ntBASIC3.5□□□□□ -1.85
GFRA3O60609 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
GFRA3O60609 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
GFRA3O60609 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
GFRA3O60609 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
GFRA3O60609 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.49□□□□□ -1.85
GFRA3O60609 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.49□□□□□ -1.85
GFRA3O60609 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
GFRA3O60609 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
GFRA3O60609 SNORA7.2-201ENST00000364446 145 ntBASIC3.49□□□□□ -1.85
GFRA3O60609 RNA5SP117-201ENST00000365294 118 ntBASIC3.49□□□□□ -1.85
GFRA3O60609 RNU6-936P-201ENST00000384005 107 ntBASIC3.49□□□□□ -1.85
GFRA3O60609 MIR124-3-201ENST00000384866 87 ntBASIC3.49□□□□□ -1.85
GFRA3O60609 MIR504-201ENST00000385065 83 ntBASIC3.49□□□□□ -1.85
GFRA3O60609 HSPE1P26-201ENST00000405341 275 ntBASIC3.49□□□□□ -1.85
GFRA3O60609 RNA5SP508-201ENST00000411327 119 ntBASIC3.49□□□□□ -1.85
GFRA3O60609 Z98742.2-201ENST00000431564 187 ntBASIC3.49□□□□□ -1.85
GFRA3O60609 SNORD108-201ENST00000459332 71 ntBASIC3.49□□□□□ -1.85
GFRA3O60609 AC006483.1-201ENST00000487308 313 ntBASIC3.49□□□□□ -1.85
GFRA3O60609 RNU6-965P-201ENST00000516721 96 ntBASIC3.49□□□□□ -1.85
GFRA3O60609 MIR338-201ENST00000636369 67 ntBASIC3.49□□□□□ -1.85
GFRA3O60609 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
GFRA3O60609 SNORD74.4-201ENST00000364129 80 ntBASIC3.48□□□□□ -1.85
GFRA3O60609 RNU6-132P-201ENST00000383863 107 ntBASIC3.48□□□□□ -1.85
GFRA3O60609 RNU6-913P-201ENST00000390913 95 ntBASIC3.48□□□□□ -1.85
GFRA3O60609 RNU4-47P-201ENST00000410876 114 ntBASIC3.48□□□□□ -1.85
GFRA3O60609 AC123900.1-201ENST00000420390 96 ntBASIC3.48□□□□□ -1.85
GFRA3O60609 AC003685.2-201ENST00000422795 395 ntBASIC3.48□□□□□ -1.85
GFRA3O60609 RNU7-79P-201ENST00000516082 62 ntBASIC3.48□□□□□ -1.85
GFRA3O60609 RNU6-991P-201ENST00000516168 107 ntBASIC3.48□□□□□ -1.85
GFRA3O60609 RNU7-53P-201ENST00000516705 60 ntBASIC3.48□□□□□ -1.85
GFRA3O60609 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.48□□□□□ -1.85
GFRA3O60609 LINC00901.1-201ENST00000617252 152 ntBASIC3.48□□□□□ -1.85
GFRA3O60609 U4.6-201ENST00000621618 127 ntBASIC3.48□□□□□ -1.85
GFRA3O60609 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
GFRA3O60609 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
GFRA3O60609 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.48□□□□□ -1.85
GFRA3O60609 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
GFRA3O60609 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
GFRA3O60609 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
GFRA3O60609 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
GFRA3O60609 RNU6-446P-201ENST00000362827 106 ntBASIC3.47□□□□□ -1.85
GFRA3O60609 RNU6-1079P-201ENST00000362861 110 ntBASIC3.47□□□□□ -1.85
GFRA3O60609 SNORA24-201ENST00000384096 131 ntBASIC3.47□□□□□ -1.85
GFRA3O60609 RNU6-1184P-201ENST00000384588 108 ntBASIC3.47□□□□□ -1.85
GFRA3O60609 RNU6-602P-201ENST00000411155 105 ntBASIC3.47□□□□□ -1.85
GFRA3O60609 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.47□□□□□ -1.85
GFRA3O60609 AC245047.7-201ENST00000440265 293 ntBASIC3.47□□□□□ -1.85
GFRA3O60609 RNU7-94P-201ENST00000459576 63 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms