Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 Y_RNA.571-201ENST00000384753 98 ntBASIC1.77□□□□□ -2.13
LDB2O43679 MIR616-201ENST00000385293 97 ntBASIC1.77□□□□□ -2.13
LDB2O43679 RNA5SP496-201ENST00000391240 109 ntBASIC1.77□□□□□ -2.13
LDB2O43679 RNA5SP100-201ENST00000410903 110 ntBASIC1.77□□□□□ -2.13
LDB2O43679 RNA5SP59-201ENST00000410922 110 ntBASIC1.77□□□□□ -2.13
LDB2O43679 RN7SKP101-201ENST00000411376 320 ntBASIC1.77□□□□□ -2.13
LDB2O43679 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.77□□□□□ -2.13
LDB2O43679 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.77□□□□□ -2.13
LDB2O43679 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.77□□□□□ -2.13
LDB2O43679 AL391903.3-201ENST00000612158 163 ntBASIC1.77□□□□□ -2.13
LDB2O43679 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.77□□□□□ -2.13
LDB2O43679 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
LDB2O43679 RNU6-103P-201ENST00000363686 107 ntBASIC1.76□□□□□ -2.13
LDB2O43679 Y_RNA.796-201ENST00000364268 102 ntBASIC1.76□□□□□ -2.13
LDB2O43679 Y_RNA.233-201ENST00000364407 101 ntBASIC1.76□□□□□ -2.13
LDB2O43679 Y_RNA.253-201ENST00000364562 112 ntBASIC1.76□□□□□ -2.13
LDB2O43679 Y_RNA.799-201ENST00000364992 102 ntBASIC1.76□□□□□ -2.13
LDB2O43679 RNU4-70P-201ENST00000384579 139 ntBASIC1.76□□□□□ -2.13
LDB2O43679 RPL23AP6-201ENST00000446637 472 ntBASIC1.76□□□□□ -2.13
LDB2O43679 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.76□□□□□ -2.13
LDB2O43679 AL049830.1-201ENST00000468034 425 ntBASIC1.76□□□□□ -2.13
LDB2O43679 HMGN1P7-201ENST00000491722 313 ntBASIC1.76□□□□□ -2.13
LDB2O43679 RNA5SP458-201ENST00000516188 119 ntBASIC1.76□□□□□ -2.13
LDB2O43679 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.76□□□□□ -2.13
LDB2O43679 MIR4299-201ENST00000577899 72 ntBASIC1.76□□□□□ -2.13
LDB2O43679 AL021707.8-201ENST00000609428 183 ntBASIC1.76□□□□□ -2.13
LDB2O43679 JPX_2.1-201ENST00000614161 69 ntBASIC1.76□□□□□ -2.13
LDB2O43679 FTX_2.1-201ENST00000618816 94 ntBASIC1.76□□□□□ -2.13
LDB2O43679 MIR8054-201ENST00000620877 86 ntBASIC1.76□□□□□ -2.13
LDB2O43679 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
LDB2O43679 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
LDB2O43679 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
LDB2O43679 RNU6-1209P-201ENST00000363655 107 ntBASIC1.75□□□□□ -2.13
LDB2O43679 MT-TR-201ENST00000387439 65 ntBASIC1.75□□□□□ -2.13
LDB2O43679 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
LDB2O43679 RNU6-440P-201ENST00000390882 105 ntBASIC1.75□□□□□ -2.13
LDB2O43679 MIR1278-201ENST00000408753 81 ntBASIC1.75□□□□□ -2.13
LDB2O43679 RNU2-7P-201ENST00000410794 178 ntBASIC1.75□□□□□ -2.13
LDB2O43679 AL158823.1-201ENST00000418441 478 ntBASIC1.75□□□□□ -2.13
LDB2O43679 AC245047.8-201ENST00000456455 284 ntBASIC1.75□□□□□ -2.13
LDB2O43679 RNA5SP437-201ENST00000517249 129 ntBASIC1.75□□□□□ -2.13
LDB2O43679 AC022559.1-201ENST00000520905 205 ntBASIC1.75□□□□□ -2.13
LDB2O43679 RNU2-4P-201ENST00000606190 192 ntBASIC1.75□□□□□ -2.13
LDB2O43679 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
LDB2O43679 RNA5SP482-201ENST00000391269 118 ntBASIC1.74□□□□□ -2.13
LDB2O43679 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.74□□□□□ -2.13
LDB2O43679 SNORD11-201ENST00000459124 84 ntBASIC1.74□□□□□ -2.13
LDB2O43679 SCARNA8-201ENST00000515924 131 ntBASIC1.74□□□□□ -2.13
LDB2O43679 SNORA31.10-201ENST00000516482 106 ntBASIC1.74□□□□□ -2.13
LDB2O43679 SNORA25.15-201ENST00000516487 89 ntBASIC1.74□□□□□ -2.13
LDB2O43679 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.74□□□□□ -2.13
LDB2O43679 RNU7-28P-201ENST00000516759 62 ntBASIC1.74□□□□□ -2.13
LDB2O43679 RNA5SP481-201ENST00000516814 122 ntBASIC1.74□□□□□ -2.13
LDB2O43679 RPL23AP91-201ENST00000569211 455 ntBASIC1.74□□□□□ -2.13
LDB2O43679 AL773524.1-201ENST00000614065 229 ntBASIC1.74□□□□□ -2.13
LDB2O43679 AL591926.4-201ENST00000616895 298 ntBASIC1.74□□□□□ -2.13
LDB2O43679 AC084768.2-201ENST00000622736 221 ntBASIC1.74□□□□□ -2.13
LDB2O43679 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.74□□□□□ -2.13
LDB2O43679 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.74□□□□□ -2.13
LDB2O43679 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
LDB2O43679 RNU6-682P-201ENST00000363843 106 ntBASIC1.73□□□□□ -2.13
LDB2O43679 Y_RNA.265-201ENST00000364677 108 ntBASIC1.73□□□□□ -2.13
LDB2O43679 SNORA4.2-201ENST00000365313 147 ntBASIC1.73□□□□□ -2.13
LDB2O43679 RNY3P5-201ENST00000384127 102 ntBASIC1.73□□□□□ -2.13
LDB2O43679 Y_RNA.555-201ENST00000384673 110 ntBASIC1.73□□□□□ -2.13
LDB2O43679 RNU6-1228P-201ENST00000391014 107 ntBASIC1.73□□□□□ -2.13
LDB2O43679 RN7SKP200-201ENST00000410564 320 ntBASIC1.73□□□□□ -2.13
LDB2O43679 SNRPGP10-201ENST00000432323 225 ntBASIC1.73□□□□□ -2.13
LDB2O43679 STAG3L5P-204ENST00000443759 179 ntBASIC1.73□□□□□ -2.13
LDB2O43679 AC023449.1-201ENST00000454464 154 ntBASIC1.73□□□□□ -2.13
LDB2O43679 RNU6-1007P-201ENST00000516586 107 ntBASIC1.73□□□□□ -2.13
LDB2O43679 RNU6-861P-201ENST00000516745 106 ntBASIC1.73□□□□□ -2.13
LDB2O43679 RNU6-453P-201ENST00000516819 85 ntBASIC1.73□□□□□ -2.13
LDB2O43679 AC024614.2-201ENST00000577584 372 ntBASIC1.73□□□□□ -2.13
LDB2O43679 MIR3618-201ENST00000580330 88 ntBASIC1.73□□□□□ -2.13
LDB2O43679 MIR4744-201ENST00000581563 82 ntBASIC1.73□□□□□ -2.13
LDB2O43679 SNORA28-201ENST00000606769 126 ntBASIC1.73□□□□□ -2.13
LDB2O43679 MIR8081-201ENST00000611533 95 ntBASIC1.73□□□□□ -2.13
LDB2O43679 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LDB2O43679 MIR126-201ENST00000362291 85 ntBASIC1.72□□□□□ -2.13
LDB2O43679 Y_RNA.182-201ENST00000363880 111 ntBASIC1.72□□□□□ -2.13
LDB2O43679 Y_RNA.270-201ENST00000364693 104 ntBASIC1.72□□□□□ -2.13
LDB2O43679 MT-TT-201ENST00000387460 66 ntBASIC1.72□□□□□ -2.13
LDB2O43679 RNU6-578P-201ENST00000390980 103 ntBASIC1.72□□□□□ -2.13
LDB2O43679 AL606845.1-201ENST00000404881 255 ntBASIC1.72□□□□□ -2.13
LDB2O43679 AC009310.1-201ENST00000414414 451 ntBASIC1.72□□□□□ -2.13
LDB2O43679 HSPE1P9-201ENST00000440046 311 ntBASIC1.72□□□□□ -2.13
LDB2O43679 Y_RNA.797-201ENST00000515977 94 ntBASIC1.72□□□□□ -2.13
LDB2O43679 RNU6-250P-201ENST00000516958 103 ntBASIC1.72□□□□□ -2.13
LDB2O43679 Y_RNA.714-201ENST00000517065 90 ntBASIC1.72□□□□□ -2.13
LDB2O43679 AC012493.3-201ENST00000604494 112 ntBASIC1.72□□□□□ -2.13
LDB2O43679 U6.106-201ENST00000636360 105 ntBASIC1.72□□□□□ -2.13
LDB2O43679 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LDB2O43679 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.72□□□□□ -2.13
LDB2O43679 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
LDB2O43679 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
LDB2O43679 Y_RNA.75-201ENST00000362927 97 ntBASIC1.71□□□□□ -2.14
LDB2O43679 Y_RNA.240-201ENST00000364469 95 ntBASIC1.71□□□□□ -2.14
LDB2O43679 U8.5-201ENST00000364528 136 ntBASIC1.71□□□□□ -2.14
LDB2O43679 MIR522-201ENST00000385071 87 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 292.9 ms