Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RNY3P4-201ENST00000384428 101 ntBASIC0.42□□□□□ -2.34
CHMP2AO43633 RNY1P4-201ENST00000384595 115 ntBASIC0.42□□□□□ -2.34
CHMP2AO43633 MIR559-201ENST00000385188 96 ntBASIC0.42□□□□□ -2.34
CHMP2AO43633 SNORD78.2-201ENST00000391076 69 ntBASIC0.42□□□□□ -2.34
CHMP2AO43633 RNU1-119P-201ENST00000391122 165 ntBASIC0.42□□□□□ -2.34
CHMP2AO43633 RNU6-876P-201ENST00000391295 104 ntBASIC0.42□□□□□ -2.34
CHMP2AO43633 Y_RNA.635-201ENST00000459041 101 ntBASIC0.42□□□□□ -2.34
CHMP2AO43633 HMGN1P10-201ENST00000474557 553 ntBASIC0.42□□□□□ -2.34
CHMP2AO43633 RNU7-43P-201ENST00000516554 64 ntBASIC0.42□□□□□ -2.34
CHMP2AO43633 RNU7-181P-201ENST00000517234 74 ntBASIC0.42□□□□□ -2.34
CHMP2AO43633 MIR548AO-201ENST00000579992 96 ntBASIC0.42□□□□□ -2.34
CHMP2AO43633 MIR4300-201ENST00000581016 96 ntBASIC0.42□□□□□ -2.34
CHMP2AO43633 RN7SL793P-201ENST00000583259 296 ntBASIC0.42□□□□□ -2.34
CHMP2AO43633 AC022441.3-201ENST00000605737 136 ntBASIC0.42□□□□□ -2.34
CHMP2AO43633 U8.7-201ENST00000364940 136 ntBASIC0.41□□□□□ -2.34
CHMP2AO43633 Y_RNA.310-201ENST00000365063 113 ntBASIC0.41□□□□□ -2.34
CHMP2AO43633 MIR613-201ENST00000385248 95 ntBASIC0.41□□□□□ -2.34
CHMP2AO43633 MT-TL1-201ENST00000386347 75 ntBASIC0.41□□□□□ -2.34
CHMP2AO43633 MCFD2P1-201ENST00000417812 300 ntBASIC0.41□□□□□ -2.34
CHMP2AO43633 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.41□□□□□ -2.34
CHMP2AO43633 SNRPGP14-201ENST00000435400 219 ntBASIC0.41□□□□□ -2.34
CHMP2AO43633 AC091951.2-201ENST00000500762 203 ntBASIC0.41□□□□□ -2.34
CHMP2AO43633 RNU6-699P-201ENST00000517081 110 ntBASIC0.41□□□□□ -2.34
CHMP2AO43633 RNU6-264P-201ENST00000517134 104 ntBASIC0.41□□□□□ -2.34
CHMP2AO43633 AC024405.2-202ENST00000532731 184 ntBASIC0.41□□□□□ -2.34
CHMP2AO43633 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.41□□□□□ -2.34
CHMP2AO43633 AC093027.1-201ENST00000546698 429 ntBASIC0.41□□□□□ -2.34
CHMP2AO43633 AC025627.3-201ENST00000582078 182 ntBASIC0.41□□□□□ -2.34
CHMP2AO43633 POLR3GP1-201ENST00000594073 261 ntBASIC0.41□□□□□ -2.34
CHMP2AO43633 AC084781.2-201ENST00000615568 161 ntBASIC0.41□□□□□ -2.34
CHMP2AO43633 U2.1-201ENST00000618978 145 ntBASIC0.41□□□□□ -2.34
CHMP2AO43633 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.41□□□□□ -2.34
CHMP2AO43633 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
CHMP2AO43633 SNORD114-23-201ENST00000363536 72 ntBASIC0.4□□□□□ -2.35
CHMP2AO43633 SNORD45.3-201ENST00000363836 72 ntBASIC0.4□□□□□ -2.35
CHMP2AO43633 RNA5SP48-201ENST00000363969 126 ntBASIC0.4□□□□□ -2.35
CHMP2AO43633 SNORD113.3-201ENST00000364630 78 ntBASIC0.4□□□□□ -2.35
CHMP2AO43633 RNU6-1237P-201ENST00000384777 107 ntBASIC0.4□□□□□ -2.35
CHMP2AO43633 SNORD72-201ENST00000390994 80 ntBASIC0.4□□□□□ -2.35
CHMP2AO43633 RNU6-192P-201ENST00000391253 100 ntBASIC0.4□□□□□ -2.35
CHMP2AO43633 RNU2-14P-201ENST00000411053 191 ntBASIC0.4□□□□□ -2.35
CHMP2AO43633 FCF1P9-201ENST00000412546 282 ntBASIC0.4□□□□□ -2.35
CHMP2AO43633 MTND1P2-201ENST00000430604 821 ntBASIC0.4□□□□□ -2.35
CHMP2AO43633 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.4□□□□□ -2.35
CHMP2AO43633 RNU6-307P-201ENST00000516743 106 ntBASIC0.4□□□□□ -2.35
CHMP2AO43633 MIR2355-201ENST00000517199 87 ntBASIC0.4□□□□□ -2.35
CHMP2AO43633 AC025253.1-201ENST00000613623 543 ntBASIC0.4□□□□□ -2.35
CHMP2AO43633 AC104985.2-201ENST00000620598 500 ntBASIC0.4□□□□□ -2.35
CHMP2AO43633 RNU6-1209P-201ENST00000363655 107 ntBASIC0.39□□□□□ -2.35
CHMP2AO43633 Y_RNA.341-201ENST00000365341 102 ntBASIC0.39□□□□□ -2.35
CHMP2AO43633 VTRNA1-3-201ENST00000365645 89 ntBASIC0.39□□□□□ -2.35
CHMP2AO43633 SNORD116-29-201ENST00000384516 83 ntBASIC0.39□□□□□ -2.35
CHMP2AO43633 Y_RNA.570-201ENST00000384750 101 ntBASIC0.39□□□□□ -2.35
CHMP2AO43633 RNU6-205P-201ENST00000390858 107 ntBASIC0.39□□□□□ -2.35
CHMP2AO43633 MIR1827-201ENST00000408549 66 ntBASIC0.39□□□□□ -2.35
CHMP2AO43633 RNU4-30P-201ENST00000410245 143 ntBASIC0.39□□□□□ -2.35
CHMP2AO43633 AC090844.1-201ENST00000422019 156 ntBASIC0.39□□□□□ -2.35
CHMP2AO43633 MTCO2P12-201ENST00000427426 682 ntBASIC0.39□□□□□ -2.35
CHMP2AO43633 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.39□□□□□ -2.35
CHMP2AO43633 PRDX4P1-201ENST00000507189 574 ntBASIC0.39□□□□□ -2.35
CHMP2AO43633 SNORA68.3-201ENST00000515906 83 ntBASIC0.39□□□□□ -2.35
CHMP2AO43633 RNU6-559P-201ENST00000516151 98 ntBASIC0.39□□□□□ -2.35
CHMP2AO43633 RNU6-1110P-201ENST00000516462 101 ntBASIC0.39□□□□□ -2.35
CHMP2AO43633 Z83818.1-201ENST00000603584 150 ntBASIC0.39□□□□□ -2.35
CHMP2AO43633 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.39□□□□□ -2.35
CHMP2AO43633 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.39□□□□□ -2.35
CHMP2AO43633 AL589743.1-201ENST00000551932 2712 ntBASIC0.38□□□□□ -2.35
CHMP2AO43633 SNORD14E-201ENST00000364009 85 ntBASIC0.38□□□□□ -2.35
CHMP2AO43633 Y_RNA.203-201ENST00000364106 102 ntBASIC0.38□□□□□ -2.35
CHMP2AO43633 SNORD105-201ENST00000386910 85 ntBASIC0.38□□□□□ -2.35
CHMP2AO43633 SNORD111-201ENST00000408139 94 ntBASIC0.38□□□□□ -2.35
CHMP2AO43633 SNORD83.1-201ENST00000411362 77 ntBASIC0.38□□□□□ -2.35
CHMP2AO43633 MTND1P14-201ENST00000427400 950 ntBASIC0.38□□□□□ -2.35
CHMP2AO43633 AC006600.1-201ENST00000572529 153 ntBASIC0.38□□□□□ -2.35
CHMP2AO43633 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.38□□□□□ -2.35
CHMP2AO43633 uc_338.6-201ENST00000613544 171 ntBASIC0.38□□□□□ -2.35
CHMP2AO43633 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.38□□□□□ -2.35
CHMP2AO43633 Y_RNA.80-201ENST00000362996 102 ntBASIC0.37□□□□□ -2.35
CHMP2AO43633 RNU6-268P-201ENST00000364174 107 ntBASIC0.37□□□□□ -2.35
CHMP2AO43633 Y_RNA.248-201ENST00000364501 109 ntBASIC0.37□□□□□ -2.35
CHMP2AO43633 Y_RNA.485-201ENST00000384395 102 ntBASIC0.37□□□□□ -2.35
CHMP2AO43633 Y_RNA.496-201ENST00000384444 101 ntBASIC0.37□□□□□ -2.35
CHMP2AO43633 MIR628-201ENST00000385229 95 ntBASIC0.37□□□□□ -2.35
CHMP2AO43633 AL603910.2-201ENST00000407268 136 ntBASIC0.37□□□□□ -2.35
CHMP2AO43633 RPL23AP54-201ENST00000495129 419 ntBASIC0.37□□□□□ -2.35
CHMP2AO43633 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.37□□□□□ -2.35
CHMP2AO43633 Y_RNA.661-201ENST00000516003 99 ntBASIC0.37□□□□□ -2.35
CHMP2AO43633 RNU7-4P-201ENST00000516961 62 ntBASIC0.37□□□□□ -2.35
CHMP2AO43633 RN7SKP295-201ENST00000517264 153 ntBASIC0.37□□□□□ -2.35
CHMP2AO43633 AL355375.2-201ENST00000574825 175 ntBASIC0.37□□□□□ -2.35
CHMP2AO43633 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.37□□□□□ -2.35
CHMP2AO43633 AC005730.3-201ENST00000583067 366 ntBASIC0.37□□□□□ -2.35
CHMP2AO43633 AC007742.2-201ENST00000618226 398 ntBASIC0.37□□□□□ -2.35
CHMP2AO43633 MTND1P7-201ENST00000632801 297 ntBASIC0.37□□□□□ -2.35
CHMP2AO43633 Y_RNA.331-201ENST00000365267 102 ntBASIC0.36□□□□□ -2.35
CHMP2AO43633 RNU6-1323P-201ENST00000384025 107 ntBASIC0.36□□□□□ -2.35
CHMP2AO43633 Y_RNA.494-201ENST00000384432 111 ntBASIC0.36□□□□□ -2.35
CHMP2AO43633 RNU6-125P-201ENST00000384505 107 ntBASIC0.36□□□□□ -2.35
CHMP2AO43633 U8.17-201ENST00000391292 132 ntBASIC0.36□□□□□ -2.35
CHMP2AO43633 MTCO2P33-201ENST00000402100 465 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms