Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.96□□□□□ -2.1
PHGDHO43175 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
PHGDHO43175 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
PHGDHO43175 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
PHGDHO43175 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PHGDHO43175 RNU6-1084P-201ENST00000362498 107 ntBASIC1.95□□□□□ -2.1
PHGDHO43175 U8.5-201ENST00000364528 136 ntBASIC1.95□□□□□ -2.1
PHGDHO43175 RNU6-163P-201ENST00000384396 106 ntBASIC1.95□□□□□ -2.1
PHGDHO43175 RPL30P13-201ENST00000418873 348 ntBASIC1.95□□□□□ -2.1
PHGDHO43175 PIGPP3-201ENST00000425307 415 ntBASIC1.95□□□□□ -2.1
PHGDHO43175 PGBD4P5-201ENST00000445958 426 ntBASIC1.95□□□□□ -2.1
PHGDHO43175 SNORD11-201ENST00000459124 84 ntBASIC1.95□□□□□ -2.1
PHGDHO43175 AP002392.1-201ENST00000537692 208 ntBASIC1.95□□□□□ -2.1
PHGDHO43175 AC120024.3-201ENST00000603167 156 ntBASIC1.95□□□□□ -2.1
PHGDHO43175 Z83818.1-201ENST00000603584 150 ntBASIC1.95□□□□□ -2.1
PHGDHO43175 AC095038.3-201ENST00000634439 195 ntBASIC1.95□□□□□ -2.1
PHGDHO43175 AL359851.1-201ENST00000569460 4997 ntBASIC1.94□□□□□ -2.1
PHGDHO43175 Y_RNA.238-201ENST00000364441 102 ntBASIC1.94□□□□□ -2.1
PHGDHO43175 Y_RNA.571-201ENST00000384753 98 ntBASIC1.94□□□□□ -2.1
PHGDHO43175 RN7SKP101-201ENST00000411376 320 ntBASIC1.94□□□□□ -2.1
PHGDHO43175 NDUFA4P2-201ENST00000489989 244 ntBASIC1.94□□□□□ -2.1
PHGDHO43175 CYCTP-201ENST00000504253 315 ntBASIC1.94□□□□□ -2.1
PHGDHO43175 RNU7-12P-201ENST00000516030 62 ntBASIC1.94□□□□□ -2.1
PHGDHO43175 RNU6-1219P-201ENST00000516143 112 ntBASIC1.94□□□□□ -2.1
PHGDHO43175 RNU6-561P-201ENST00000516222 102 ntBASIC1.94□□□□□ -2.1
PHGDHO43175 RNU6-1007P-201ENST00000516586 107 ntBASIC1.94□□□□□ -2.1
PHGDHO43175 Y_RNA.700-201ENST00000516806 100 ntBASIC1.94□□□□□ -2.1
PHGDHO43175 RNU6-182P-201ENST00000516970 105 ntBASIC1.94□□□□□ -2.1
PHGDHO43175 RNU6-1116P-201ENST00000517269 99 ntBASIC1.94□□□□□ -2.1
PHGDHO43175 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.94□□□□□ -2.1
PHGDHO43175 AL049861.1-201ENST00000603130 150 ntBASIC1.94□□□□□ -2.1
PHGDHO43175 SNORD3E-202ENST00000627253 216 ntBASIC1.94□□□□□ -2.1
PHGDHO43175 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
PHGDHO43175 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
PHGDHO43175 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
PHGDHO43175 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PHGDHO43175 MIRLET7C-201ENST00000362160 84 ntBASIC1.93□□□□□ -2.1
PHGDHO43175 MIR424-201ENST00000362227 98 ntBASIC1.93□□□□□ -2.1
PHGDHO43175 RNU6-1123P-201ENST00000362347 106 ntBASIC1.93□□□□□ -2.1
PHGDHO43175 Y_RNA.7-201ENST00000362352 102 ntBASIC1.93□□□□□ -2.1
PHGDHO43175 Y_RNA.150-201ENST00000363562 102 ntBASIC1.93□□□□□ -2.1
PHGDHO43175 RN7SKP223-201ENST00000410582 62 ntBASIC1.93□□□□□ -2.1
PHGDHO43175 AC074198.2-201ENST00000508153 258 ntBASIC1.93□□□□□ -2.1
PHGDHO43175 RN7SKP164-201ENST00000516138 266 ntBASIC1.93□□□□□ -2.1
PHGDHO43175 RNU6-861P-201ENST00000516745 106 ntBASIC1.93□□□□□ -2.1
PHGDHO43175 SNORA44.1-201ENST00000517031 108 ntBASIC1.93□□□□□ -2.1
PHGDHO43175 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.93□□□□□ -2.1
PHGDHO43175 AL021707.8-201ENST00000609428 183 ntBASIC1.93□□□□□ -2.1
PHGDHO43175 uc_338.4-201ENST00000616635 176 ntBASIC1.93□□□□□ -2.1
PHGDHO43175 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
PHGDHO43175 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
PHGDHO43175 RNU6-682P-201ENST00000363843 106 ntBASIC1.92□□□□□ -2.1
PHGDHO43175 Y_RNA.233-201ENST00000364407 101 ntBASIC1.92□□□□□ -2.1
PHGDHO43175 snoU2-30.1-201ENST00000365012 70 ntBASIC1.92□□□□□ -2.1
PHGDHO43175 MIR194-1-201ENST00000384892 85 ntBASIC1.92□□□□□ -2.1
PHGDHO43175 MIR30A-201ENST00000385092 71 ntBASIC1.92□□□□□ -2.1
PHGDHO43175 MIR660-201ENST00000385235 97 ntBASIC1.92□□□□□ -2.1
PHGDHO43175 Y_RNA.587-201ENST00000391210 103 ntBASIC1.92□□□□□ -2.1
PHGDHO43175 AC004965.1-201ENST00000413033 213 ntBASIC1.92□□□□□ -2.1
PHGDHO43175 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.92□□□□□ -2.1
PHGDHO43175 AL445646.1-201ENST00000431784 216 ntBASIC1.92□□□□□ -2.1
PHGDHO43175 HMGN2P23-201ENST00000456759 269 ntBASIC1.92□□□□□ -2.1
PHGDHO43175 RNU7-120P-201ENST00000459334 63 ntBASIC1.92□□□□□ -2.1
PHGDHO43175 AC114811.1-201ENST00000507207 168 ntBASIC1.92□□□□□ -2.1
PHGDHO43175 MIR514B-201ENST00000516774 80 ntBASIC1.92□□□□□ -2.1
PHGDHO43175 MIR4778-201ENST00000577635 80 ntBASIC1.92□□□□□ -2.1
PHGDHO43175 MIR4648-201ENST00000580107 72 ntBASIC1.92□□□□□ -2.1
PHGDHO43175 AC087685.1-201ENST00000587507 141 ntBASIC1.92□□□□□ -2.1
PHGDHO43175 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.92□□□□□ -2.1
PHGDHO43175 MIR219B-201ENST00000637023 88 ntBASIC1.92□□□□□ -2.1
PHGDHO43175 AC092881.1-201ENST00000638218 2733 ntBASIC1.92□□□□□ -2.1
PHGDHO43175 Y_RNA.182-201ENST00000363880 111 ntBASIC1.91□□□□□ -2.1
PHGDHO43175 SNORD50B-201ENST00000364995 70 ntBASIC1.91□□□□□ -2.1
PHGDHO43175 MIR616-201ENST00000385293 97 ntBASIC1.91□□□□□ -2.1
PHGDHO43175 MIR802-201ENST00000390235 94 ntBASIC1.91□□□□□ -2.1
PHGDHO43175 MIR891A-201ENST00000401237 79 ntBASIC1.91□□□□□ -2.1
PHGDHO43175 RN7SL429P-201ENST00000479090 223 ntBASIC1.91□□□□□ -2.1
PHGDHO43175 RN7SL489P-201ENST00000486185 223 ntBASIC1.91□□□□□ -2.1
PHGDHO43175 RN7SL327P-201ENST00000488659 223 ntBASIC1.91□□□□□ -2.1
PHGDHO43175 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.91□□□□□ -2.1
PHGDHO43175 SNORD45.4-201ENST00000516629 73 ntBASIC1.91□□□□□ -2.1
PHGDHO43175 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.91□□□□□ -2.1
PHGDHO43175 RN7SL853P-201ENST00000617250 223 ntBASIC1.91□□□□□ -2.1
PHGDHO43175 AC027279.3-201ENST00000625055 122 ntBASIC1.91□□□□□ -2.1
PHGDHO43175 U6.106-201ENST00000636360 105 ntBASIC1.91□□□□□ -2.1
PHGDHO43175 ICE2P2-201ENST00000483823 2787 ntBASIC1.9□□□□□ -2.1
PHGDHO43175 SNORD14E-201ENST00000364009 85 ntBASIC1.9□□□□□ -2.11
PHGDHO43175 RNU4-70P-201ENST00000384579 139 ntBASIC1.9□□□□□ -2.11
PHGDHO43175 AL606845.1-201ENST00000404881 255 ntBASIC1.9□□□□□ -2.11
PHGDHO43175 AL161935.2-201ENST00000414627 60 ntBASIC1.9□□□□□ -2.11
PHGDHO43175 AC093850.1-201ENST00000454121 251 ntBASIC1.9□□□□□ -2.11
PHGDHO43175 SNORA77B-201ENST00000578179 125 ntBASIC1.9□□□□□ -2.11
PHGDHO43175 MIR4744-201ENST00000581563 82 ntBASIC1.9□□□□□ -2.11
PHGDHO43175 AC072026.1-201ENST00000605023 201 ntBASIC1.9□□□□□ -2.11
PHGDHO43175 AL391903.3-201ENST00000612158 163 ntBASIC1.9□□□□□ -2.11
PHGDHO43175 FTX_2.1-201ENST00000618816 94 ntBASIC1.9□□□□□ -2.11
PHGDHO43175 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.9□□□□□ -2.11
PHGDHO43175 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
PHGDHO43175 Y_RNA.412-201ENST00000384001 104 ntBASIC1.89□□□□□ -2.11
PHGDHO43175 Y_RNA.435-201ENST00000384095 112 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms