Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MIR5688-201ENST00000580619 83 ntBASIC2.26□□□□□ -2.05
TRIM38O00635 AC120024.3-201ENST00000603167 156 ntBASIC2.26□□□□□ -2.05
TRIM38O00635 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.26□□□□□ -2.05
TRIM38O00635 MIR6873-201ENST00000622788 63 ntBASIC2.26□□□□□ -2.05
TRIM38O00635 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.26□□□□□ -2.05
TRIM38O00635 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
TRIM38O00635 Y_RNA.124-201ENST00000363339 93 ntBASIC2.25□□□□□ -2.05
TRIM38O00635 Y_RNA.280-201ENST00000364765 112 ntBASIC2.25□□□□□ -2.05
TRIM38O00635 RNU6-1240P-201ENST00000365155 104 ntBASIC2.25□□□□□ -2.05
TRIM38O00635 SNORA6-201ENST00000384033 151 ntBASIC2.25□□□□□ -2.05
TRIM38O00635 MIR515-2-201ENST00000384883 83 ntBASIC2.25□□□□□ -2.05
TRIM38O00635 MIR515-1-201ENST00000384884 83 ntBASIC2.25□□□□□ -2.05
TRIM38O00635 SNORA11.4-201ENST00000408823 129 ntBASIC2.25□□□□□ -2.05
TRIM38O00635 RNA5SP89-201ENST00000410300 108 ntBASIC2.25□□□□□ -2.05
TRIM38O00635 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.25□□□□□ -2.05
TRIM38O00635 AC117454.1-201ENST00000491120 168 ntBASIC2.25□□□□□ -2.05
TRIM38O00635 SNORD33.1-201ENST00000516213 88 ntBASIC2.25□□□□□ -2.05
TRIM38O00635 AC015712.3-201ENST00000559380 164 ntBASIC2.25□□□□□ -2.05
TRIM38O00635 MIR5007-201ENST00000583098 95 ntBASIC2.25□□□□□ -2.05
TRIM38O00635 AC108081.1-201ENST00000604358 221 ntBASIC2.25□□□□□ -2.05
TRIM38O00635 U2.20-201ENST00000613956 192 ntBASIC2.25□□□□□ -2.05
TRIM38O00635 AC006435.5-201ENST00000624486 112 ntBASIC2.25□□□□□ -2.05
TRIM38O00635 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
TRIM38O00635 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
TRIM38O00635 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
TRIM38O00635 MIR367-201ENST00000362299 68 ntBASIC2.24□□□□□ -2.05
TRIM38O00635 snoU2-30.2-201ENST00000362805 70 ntBASIC2.24□□□□□ -2.05
TRIM38O00635 SNORD45.3-201ENST00000363836 72 ntBASIC2.24□□□□□ -2.05
TRIM38O00635 SNORA16B-201ENST00000364674 135 ntBASIC2.24□□□□□ -2.05
TRIM38O00635 Y_RNA.622-201ENST00000411091 108 ntBASIC2.24□□□□□ -2.05
TRIM38O00635 Y_RNA.630-201ENST00000411370 108 ntBASIC2.24□□□□□ -2.05
TRIM38O00635 AC016909.1-201ENST00000415916 166 ntBASIC2.24□□□□□ -2.05
TRIM38O00635 AC063976.4-201ENST00000421971 163 ntBASIC2.24□□□□□ -2.05
TRIM38O00635 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.24□□□□□ -2.05
TRIM38O00635 AC018634.1-201ENST00000437554 401 ntBASIC2.24□□□□□ -2.05
TRIM38O00635 RNU5E-3P-201ENST00000515913 68 ntBASIC2.24□□□□□ -2.05
TRIM38O00635 SNORA72.7-201ENST00000516349 94 ntBASIC2.24□□□□□ -2.05
TRIM38O00635 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.24□□□□□ -2.05
TRIM38O00635 MIR6840-201ENST00000611937 71 ntBASIC2.24□□□□□ -2.05
TRIM38O00635 AC022513.1-201ENST00000624512 117 ntBASIC2.24□□□□□ -2.05
TRIM38O00635 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
TRIM38O00635 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
TRIM38O00635 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.24□□□□□ -2.05
TRIM38O00635 RNU6-144P-201ENST00000383951 107 ntBASIC2.23□□□□□ -2.05
TRIM38O00635 SNORD116-13-201ENST00000384408 92 ntBASIC2.23□□□□□ -2.05
TRIM38O00635 SNORA64-201ENST00000384674 134 ntBASIC2.23□□□□□ -2.05
TRIM38O00635 CST2P1-201ENST00000425770 87 ntBASIC2.23□□□□□ -2.05
TRIM38O00635 RPS15AP28-201ENST00000435088 386 ntBASIC2.23□□□□□ -2.05
TRIM38O00635 SNRPGP8-201ENST00000454064 226 ntBASIC2.23□□□□□ -2.05
TRIM38O00635 RNU7-115P-201ENST00000516433 55 ntBASIC2.23□□□□□ -2.05
TRIM38O00635 DEFB122-202ENST00000569013 197 ntBASIC2.23□□□□□ -2.05
TRIM38O00635 MIR548AY-201ENST00000617669 107 ntBASIC2.23□□□□□ -2.05
TRIM38O00635 AC068647.2-201ENST00000637380 353 ntBASIC2.23□□□□□ -2.05
TRIM38O00635 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TRIM38O00635 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.22□□□□□ -2.05
TRIM38O00635 U8.1-201ENST00000362843 134 ntBASIC2.22□□□□□ -2.05
TRIM38O00635 RNU6-597P-201ENST00000365620 102 ntBASIC2.22□□□□□ -2.05
TRIM38O00635 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
TRIM38O00635 AL117342.1-201ENST00000404861 406 ntBASIC2.22□□□□□ -2.05
TRIM38O00635 MIR1253-201ENST00000408273 105 ntBASIC2.22□□□□□ -2.05
TRIM38O00635 SNORA36B-201ENST00000410438 131 ntBASIC2.22□□□□□ -2.05
TRIM38O00635 RNA5SP501-201ENST00000410990 112 ntBASIC2.22□□□□□ -2.05
TRIM38O00635 HSPE1P21-201ENST00000438283 308 ntBASIC2.22□□□□□ -2.05
TRIM38O00635 RNU6-168P-201ENST00000516189 101 ntBASIC2.22□□□□□ -2.05
TRIM38O00635 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.22□□□□□ -2.05
TRIM38O00635 AC069114.2-201ENST00000604699 304 ntBASIC2.22□□□□□ -2.05
TRIM38O00635 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.22□□□□□ -2.05
TRIM38O00635 MIR338-201ENST00000636369 67 ntBASIC2.22□□□□□ -2.05
TRIM38O00635 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TRIM38O00635 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TRIM38O00635 SNORA20B-201ENST00000384220 132 ntBASIC2.21□□□□□ -2.06
TRIM38O00635 SNORA67.3-201ENST00000384366 140 ntBASIC2.21□□□□□ -2.06
TRIM38O00635 Y_RNA.584-201ENST00000391090 114 ntBASIC2.21□□□□□ -2.06
TRIM38O00635 AL355796.1-201ENST00000406706 323 ntBASIC2.21□□□□□ -2.06
TRIM38O00635 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.21□□□□□ -2.06
TRIM38O00635 HMGN2P34-201ENST00000437647 269 ntBASIC2.21□□□□□ -2.06
TRIM38O00635 AC108210.2-201ENST00000503681 201 ntBASIC2.21□□□□□ -2.06
TRIM38O00635 RNU6-1041P-201ENST00000516254 102 ntBASIC2.21□□□□□ -2.06
TRIM38O00635 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TRIM38O00635 RNU6-508P-201ENST00000363231 103 ntBASIC2.2□□□□□ -2.06
TRIM38O00635 RNU6-978P-201ENST00000364371 103 ntBASIC2.2□□□□□ -2.06
TRIM38O00635 Y_RNA.309-201ENST00000365046 111 ntBASIC2.2□□□□□ -2.06
TRIM38O00635 RNY3P5-201ENST00000384127 102 ntBASIC2.2□□□□□ -2.06
TRIM38O00635 MIR17-201ENST00000385012 84 ntBASIC2.2□□□□□ -2.06
TRIM38O00635 MIR221-201ENST00000385135 110 ntBASIC2.2□□□□□ -2.06
TRIM38O00635 MLLT10P1-201ENST00000418346 262 ntBASIC2.2□□□□□ -2.06
TRIM38O00635 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.2□□□□□ -2.06
TRIM38O00635 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.2□□□□□ -2.06
TRIM38O00635 AL158147.1-201ENST00000443970 75 ntBASIC2.2□□□□□ -2.06
TRIM38O00635 RPL23AP7-203ENST00000449021 469 ntBASIC2.2□□□□□ -2.06
TRIM38O00635 AC010598.1-201ENST00000510378 103 ntBASIC2.2□□□□□ -2.06
TRIM38O00635 SNORA70.12-201ENST00000516084 153 ntBASIC2.2□□□□□ -2.06
TRIM38O00635 RNU6-1337P-201ENST00000516525 95 ntBASIC2.2□□□□□ -2.06
TRIM38O00635 RNU2-60P-201ENST00000517290 128 ntBASIC2.2□□□□□ -2.06
TRIM38O00635 AC090142.3-201ENST00000519012 385 ntBASIC2.2□□□□□ -2.06
TRIM38O00635 MIR378D2-201ENST00000580636 98 ntBASIC2.2□□□□□ -2.06
TRIM38O00635 AP003357.1-201ENST00000604497 148 ntBASIC2.2□□□□□ -2.06
TRIM38O00635 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.2□□□□□ -2.06
TRIM38O00635 U6.95-201ENST00000636931 70 ntBASIC2.2□□□□□ -2.06
TRIM38O00635 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms