Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
RFXAPO00287 MIR494-201ENST00000349529 81 ntBASIC2.7□□□□□ -1.98
RFXAPO00287 Y_RNA.4-201ENST00000362333 112 ntBASIC2.7□□□□□ -1.98
RFXAPO00287 SNORA33-201ENST00000363664 130 ntBASIC2.7□□□□□ -1.98
RFXAPO00287 SNORD24-201ENST00000383884 75 ntBASIC2.7□□□□□ -1.98
RFXAPO00287 Y_RNA.544-201ENST00000384650 113 ntBASIC2.7□□□□□ -1.98
RFXAPO00287 RNU6-1104P-201ENST00000384723 104 ntBASIC2.7□□□□□ -1.98
RFXAPO00287 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RFXAPO00287 RNU6-1186P-201ENST00000410429 97 ntBASIC2.7□□□□□ -1.98
RFXAPO00287 AC060773.1-201ENST00000421698 310 ntBASIC2.7□□□□□ -1.98
RFXAPO00287 AC233266.1-201ENST00000454518 96 ntBASIC2.7□□□□□ -1.98
RFXAPO00287 RNA5SP57-201ENST00000459463 123 ntBASIC2.7□□□□□ -1.98
RFXAPO00287 RN7SL499P-201ENST00000481141 276 ntBASIC2.7□□□□□ -1.98
RFXAPO00287 AC006483.1-201ENST00000487308 313 ntBASIC2.7□□□□□ -1.98
RFXAPO00287 HMGN1P7-201ENST00000491722 313 ntBASIC2.7□□□□□ -1.98
RFXAPO00287 CKS1BP2-201ENST00000497342 240 ntBASIC2.7□□□□□ -1.98
RFXAPO00287 RNU6-970P-201ENST00000516312 107 ntBASIC2.7□□□□□ -1.98
RFXAPO00287 RNU6-586P-201ENST00000517265 104 ntBASIC2.7□□□□□ -1.98
RFXAPO00287 MIR5197-201ENST00000583721 112 ntBASIC2.7□□□□□ -1.98
RFXAPO00287 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.7□□□□□ -1.98
RFXAPO00287 AC242852.1-201ENST00000612151 96 ntBASIC2.7□□□□□ -1.98
RFXAPO00287 U2.20-201ENST00000613956 192 ntBASIC2.7□□□□□ -1.98
RFXAPO00287 MALAT1.1-201ENST00000618249 95 ntBASIC2.7□□□□□ -1.98
RFXAPO00287 AC244015.1-201ENST00000622301 99 ntBASIC2.7□□□□□ -1.98
RFXAPO00287 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.7□□□□□ -1.98
RFXAPO00287 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.69□□□□□ -1.98
RFXAPO00287 AC091564.4-201ENST00000533934 2194 ntBASIC2.69□□□□□ -1.98
RFXAPO00287 Y_RNA.49-201ENST00000362714 112 ntBASIC2.69□□□□□ -1.98
RFXAPO00287 Y_RNA.198-201ENST00000364013 98 ntBASIC2.69□□□□□ -1.98
RFXAPO00287 MTATP8P2-201ENST00000435212 202 ntBASIC2.69□□□□□ -1.98
RFXAPO00287 HMGN2P34-201ENST00000437647 269 ntBASIC2.69□□□□□ -1.98
RFXAPO00287 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RFXAPO00287 HMGN2P23-201ENST00000456759 269 ntBASIC2.69□□□□□ -1.98
RFXAPO00287 RNA5SP112-201ENST00000515937 99 ntBASIC2.69□□□□□ -1.98
RFXAPO00287 RNU6-113P-201ENST00000516653 101 ntBASIC2.69□□□□□ -1.98
RFXAPO00287 SNORA31.26-201ENST00000517250 137 ntBASIC2.69□□□□□ -1.98
RFXAPO00287 AC068339.1-201ENST00000526965 141 ntBASIC2.69□□□□□ -1.98
RFXAPO00287 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.69□□□□□ -1.98
RFXAPO00287 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
RFXAPO00287 MIR5009-201ENST00000578736 100 ntBASIC2.69□□□□□ -1.98
RFXAPO00287 AC046143.2-201ENST00000609789 160 ntBASIC2.69□□□□□ -1.98
RFXAPO00287 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
RFXAPO00287 ICE2P2-201ENST00000483823 2787 ntBASIC2.69□□□□□ -1.98
RFXAPO00287 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RFXAPO00287 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RFXAPO00287 RNY1P10-201ENST00000363268 113 ntBASIC2.68□□□□□ -1.98
RFXAPO00287 RNU1-23P-201ENST00000363361 144 ntBASIC2.68□□□□□ -1.98
RFXAPO00287 Y_RNA.342-201ENST00000365352 113 ntBASIC2.68□□□□□ -1.98
RFXAPO00287 SNRPGP13-201ENST00000442212 177 ntBASIC2.68□□□□□ -1.98
RFXAPO00287 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.68□□□□□ -1.98
RFXAPO00287 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.68□□□□□ -1.98
RFXAPO00287 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.68□□□□□ -1.98
RFXAPO00287 MIR1273D-201ENST00000577266 86 ntBASIC2.68□□□□□ -1.98
RFXAPO00287 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.68□□□□□ -1.98
RFXAPO00287 AC002984.1-201ENST00000591692 448 ntBASIC2.68□□□□□ -1.98
RFXAPO00287 AC022217.4-201ENST00000604389 163 ntBASIC2.68□□□□□ -1.98
RFXAPO00287 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.68□□□□□ -1.98
RFXAPO00287 RNU6-690P-201ENST00000365242 106 ntBASIC2.67□□□□□ -1.98
RFXAPO00287 Y_RNA.338-201ENST00000365320 114 ntBASIC2.67□□□□□ -1.98
RFXAPO00287 MIR218-1-201ENST00000384999 110 ntBASIC2.67□□□□□ -1.98
RFXAPO00287 RPS3AP1-201ENST00000413190 320 ntBASIC2.67□□□□□ -1.98
RFXAPO00287 AL356320.1-201ENST00000429616 163 ntBASIC2.67□□□□□ -1.98
RFXAPO00287 AC234781.5-201ENST00000508429 271 ntBASIC2.67□□□□□ -1.98
RFXAPO00287 RNU6-904P-201ENST00000516206 101 ntBASIC2.67□□□□□ -1.98
RFXAPO00287 RNU6-126P-201ENST00000516685 103 ntBASIC2.67□□□□□ -1.98
RFXAPO00287 RNU6-856P-201ENST00000516959 98 ntBASIC2.67□□□□□ -1.98
RFXAPO00287 SUMO2P16-201ENST00000519475 264 ntBASIC2.67□□□□□ -1.98
RFXAPO00287 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.67□□□□□ -1.98
RFXAPO00287 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RFXAPO00287 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RFXAPO00287 RNU6-349P-201ENST00000362402 107 ntBASIC2.66□□□□□ -1.98
RFXAPO00287 Y_RNA.267-201ENST00000364679 109 ntBASIC2.66□□□□□ -1.98
RFXAPO00287 RNU1-91P-201ENST00000364746 163 ntBASIC2.66□□□□□ -1.98
RFXAPO00287 RNA5SP467-201ENST00000391274 118 ntBASIC2.66□□□□□ -1.98
RFXAPO00287 SNORD88.1-201ENST00000408684 91 ntBASIC2.66□□□□□ -1.98
RFXAPO00287 RPS26P48-201ENST00000491713 339 ntBASIC2.66□□□□□ -1.98
RFXAPO00287 RNU7-123P-201ENST00000515911 60 ntBASIC2.66□□□□□ -1.98
RFXAPO00287 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.66□□□□□ -1.98
RFXAPO00287 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.66□□□□□ -1.98
RFXAPO00287 HSPE1P19-201ENST00000603327 295 ntBASIC2.66□□□□□ -1.98
RFXAPO00287 SNORD115-40-201ENST00000606510 82 ntBASIC2.66□□□□□ -1.98
RFXAPO00287 U6.108-201ENST00000637764 58 ntBASIC2.66□□□□□ -1.98
RFXAPO00287 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RFXAPO00287 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
RFXAPO00287 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
RFXAPO00287 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.65□□□□□ -1.99
RFXAPO00287 MIR126-201ENST00000362291 85 ntBASIC2.65□□□□□ -1.99
RFXAPO00287 Y_RNA.107-201ENST00000363190 121 ntBASIC2.65□□□□□ -1.99
RFXAPO00287 Y_RNA.140-201ENST00000363474 103 ntBASIC2.65□□□□□ -1.99
RFXAPO00287 RNU1-96P-201ENST00000364163 162 ntBASIC2.65□□□□□ -1.99
RFXAPO00287 Y_RNA.220-201ENST00000364244 109 ntBASIC2.65□□□□□ -1.99
RFXAPO00287 RNU6-1113P-201ENST00000384348 107 ntBASIC2.65□□□□□ -1.99
RFXAPO00287 MIR520G-201ENST00000385064 90 ntBASIC2.65□□□□□ -1.99
RFXAPO00287 AP000567.1-201ENST00000406413 156 ntBASIC2.65□□□□□ -1.99
RFXAPO00287 MIR1253-201ENST00000408273 105 ntBASIC2.65□□□□□ -1.99
RFXAPO00287 Y_RNA.593-201ENST00000410292 98 ntBASIC2.65□□□□□ -1.99
RFXAPO00287 RNA5SP225-201ENST00000410874 135 ntBASIC2.65□□□□□ -1.99
RFXAPO00287 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.65□□□□□ -1.99
RFXAPO00287 SNORA31.1-201ENST00000515993 133 ntBASIC2.65□□□□□ -1.99
RFXAPO00287 SNORA31.5-201ENST00000516190 133 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms